Britta Velten
| Snapshot Date: 2025-09-30 13:45 -0400 (Tue, 30 Sep 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 82b0592 |
| git_last_commit_date: 2025-06-24 03:15:40 -0400 (Tue, 24 Jun 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-10-01 12:04 -0400 (Wed, 01 Oct 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" | 4843 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4631 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4575 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4576 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 914/2337 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.25.2 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.25.2 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.25.2.tar.gz |
| StartedAt: 2025-09-30 21:42:50 -0400 (Tue, 30 Sep 2025) |
| EndedAt: 2025-09-30 21:44:09 -0400 (Tue, 30 Sep 2025) |
| EllapsedTime: 79.3 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.25.2.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.1 Patched (2025-09-10 r88807)
* using platform: x86_64-apple-darwin20
* R was compiled by
Apple clang version 14.0.0 (clang-1400.0.29.202)
GNU Fortran (GCC) 14.2.0
* running under: macOS Monterey 12.7.6
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.25.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
* used SDK: ‘MacOSX11.3.1.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/Users/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.25.2’ ** using staged installation ** libs using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’ using SDK: ‘MacOSX11.3.1.sdk’ clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R installing to /Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin20
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-883.604
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-597.693
ELB improved by 285.91
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-531.525
ELB improved by 66.168
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-485.626
ELB improved by 45.8997
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.702
ELB improved by 20.9239
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.054
ELB improved by 8.64773
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.26
ELB improved by 4.79387
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.606
ELB improved by 3.65457
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.179
ELB improved by 3.42662
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.601
ELB improved by 3.57854
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.769
ELB improved by 3.83197
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.862
ELB improved by 3.90639
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.324
ELB improved by 3.5386
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.559
ELB improved by 2.76509
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.616
ELB improved by 1.94277
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.294
ELB improved by 1.32149
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.386
ELB improved by 0.908543
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.735
ELB improved by 0.650403
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.231
ELB improved by 0.504495
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.796
ELB improved by 0.435285
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.377
ELB improved by 0.418089
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.946
ELB improved by 0.431281
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.506
ELB improved by 0.440488
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.094
ELB improved by 0.411583
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.739
ELB improved by 0.355416
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.431
ELB improved by 0.307328
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.154
ELB improved by 0.277164
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.896
ELB improved by 0.258089
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.652
ELB improved by 0.2439
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.42
ELB improved by 0.231706
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.2
ELB improved by 0.220465
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.99
ELB improved by 0.209907
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.79
ELB improved by 0.200069
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.599
ELB improved by 0.191121
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.416
ELB improved by 0.18331
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.239
ELB improved by 0.176974
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.066
ELB improved by 0.172583
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.895
ELB improved by 0.170838
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.722
ELB improved by 0.172799
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.542
ELB improved by 0.180003
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.348
ELB improved by 0.194437
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.13
ELB improved by 0.218083
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.878
ELB improved by 0.252062
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.582
ELB improved by 0.296062
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.235
ELB improved by 0.347206
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.84
ELB improved by 0.395036
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.417
ELB improved by 0.422362
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.992
ELB improved by 0.425561
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.573
ELB improved by 0.418576
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.162
ELB improved by 0.410763
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.76
ELB improved by 0.401922
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.371
ELB improved by 0.389313
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411
ELB improved by 0.37098
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.654
ELB improved by 0.346313
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.338
ELB improved by 0.316122
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.055
ELB improved by 0.282676
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.805
ELB improved by 0.249673
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.583
ELB improved by 0.222328
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.375
ELB improved by 0.207824
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.16
ELB improved by 0.214781
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.917
ELB improved by 0.243732
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.651
ELB improved by 0.265552
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.407
ELB improved by 0.244156
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.212
ELB improved by 0.194534
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.066
ELB improved by 0.145875
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.96
ELB improved by 0.106812
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.882
ELB improved by 0.0773271
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.826
ELB improved by 0.0561275
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.785
ELB improved by 0.0417043
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.752
ELB improved by 0.0325209
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.725
ELB improved by 0.0272409
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.7
ELB improved by 0.0248884
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.675
ELB improved by 0.0248734
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.648
ELB improved by 0.0269288
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.617
ELB improved by 0.030987
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.58
ELB improved by 0.0369608
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.536
ELB improved by 0.044363
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.484
ELB improved by 0.0518351
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.427
ELB improved by 0.0570607
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.369
ELB improved by 0.0577629
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.316
ELB improved by 0.0533932
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.27
ELB improved by 0.0456055
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.233
ELB improved by 0.0368436
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.204
ELB improved by 0.0288395
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.182
ELB improved by 0.0222905
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.165
ELB improved by 0.0172411
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.151
ELB improved by 0.0134722
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.141
ELB improved by 0.0107078
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.132
ELB improved by 0.00869651
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-849.837
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-570.024
ELB improved by 279.813
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-509.181
ELB improved by 60.8424
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.266
ELB improved by 41.9156
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.843
ELB improved by 18.4228
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.03
ELB improved by 6.81306
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.489
ELB improved by 3.54116
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.77
ELB improved by 2.719
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.389
ELB improved by 2.38089
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.211
ELB improved by 2.17805
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.179
ELB improved by 2.03126
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.257
ELB improved by 1.92241
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.403
ELB improved by 1.85393
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.569
ELB improved by 1.83424
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.7
ELB improved by 1.8688
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.751
ELB improved by 1.94886
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.712
ELB improved by 2.03904
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.635
ELB improved by 2.07766
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.631
ELB improved by 2.00357
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.827
ELB improved by 1.80406
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.282
ELB improved by 1.54449
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.96
ELB improved by 1.32222
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.769
ELB improved by 1.19069
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.626
ELB improved by 1.14338
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.481
ELB improved by 1.14466
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.324
ELB improved by 1.15761
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.167
ELB improved by 1.15683
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.034
ELB improved by 1.13307
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.943
ELB improved by 1.09101
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.902
ELB improved by 1.04061
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.914
ELB improved by 0.988494
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.979
ELB improved by 0.934739
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.104
ELB improved by 0.875021
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.299
ELB improved by 0.805132
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.574
ELB improved by 0.725065
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.933
ELB improved by 0.640468
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.373
ELB improved by 0.560285
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.881
ELB improved by 0.491708
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.446
ELB improved by 0.435765
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.058
ELB improved by 0.387605
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.716
ELB improved by 0.342184
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.417
ELB improved by 0.298897
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.157
ELB improved by 0.259653
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.932
ELB improved by 0.225398
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.735
ELB improved by 0.196414
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.562
ELB improved by 0.17373
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.403
ELB improved by 0.158381
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.254
ELB improved by 0.149521
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.111
ELB improved by 0.143293
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.977
ELB improved by 0.133673
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.86
ELB improved by 0.116549
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.767
ELB improved by 0.0937675
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.696
ELB improved by 0.0710324
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.643
ELB improved by 0.0525313
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.604
ELB improved by 0.0391852
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.574
ELB improved by 0.0300783
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.55
ELB improved by 0.0239315
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.53
ELB improved by 0.0197108
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.513
ELB improved by 0.0167171
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.499
ELB improved by 0.0145119
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.486
ELB improved by 0.0128262
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.475
ELB improved by 0.0114949
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.464
ELB improved by 0.0104142
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.455
ELB improved by 0.00951722
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-886.843
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-607.038
ELB improved by 279.805
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-545.35
ELB improved by 61.6876
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-496.721
ELB improved by 48.6287
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.075
ELB improved by 26.6462
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.483
ELB improved by 12.5917
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.526
ELB improved by 6.95685
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.317
ELB improved by 5.20953
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.449
ELB improved by 4.86806
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.548
ELB improved by 4.90078
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.704
ELB improved by 4.84425
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.317
ELB improved by 4.38672
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.798
ELB improved by 3.51874
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.275
ELB improved by 2.5233
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.629
ELB improved by 1.6457
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.61
ELB improved by 1.01905
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.96
ELB improved by 0.650262
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.506
ELB improved by 0.454342
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.152
ELB improved by 0.353389
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.848
ELB improved by 0.304505
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.559
ELB improved by 0.28857
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.26
ELB improved by 0.299062
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.926
ELB improved by 0.33392
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.543
ELB improved by 0.38334
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.126
ELB improved by 0.416677
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.719
ELB improved by 0.407059
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.345
ELB improved by 0.373815
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.996
ELB improved by 0.348969
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.656
ELB improved by 0.340238
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.315
ELB improved by 0.340855
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.971
ELB improved by 0.344473
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.618
ELB improved by 0.352838
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.245
ELB improved by 0.372541
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.838
ELB improved by 0.40797
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.377
ELB improved by 0.460351
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.848
ELB improved by 0.529499
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.234
ELB improved by 0.614112
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.523
ELB improved by 0.710815
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.71
ELB improved by 0.812994
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.8
ELB improved by 0.910107
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.812
ELB improved by 0.987998
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.781
ELB improved by 1.03061
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.757
ELB improved by 1.02372
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.796
ELB improved by 0.961224
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.945
ELB improved by 0.85144
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.228
ELB improved by 0.71711
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.641
ELB improved by 0.586985
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.154
ELB improved by 0.486071
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.725
ELB improved by 0.429792
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.31
ELB improved by 0.414361
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.906
ELB improved by 0.404675
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.542
ELB improved by 0.364024
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.239
ELB improved by 0.302657
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.986
ELB improved by 0.253272
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.756
ELB improved by 0.229939
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.525
ELB improved by 0.230328
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.273
ELB improved by 0.252561
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.968
ELB improved by 0.30479
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.594
ELB improved by 0.374
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.238
ELB improved by 0.356146
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.007
ELB improved by 0.230867
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.866
ELB improved by 0.141487
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.759
ELB improved by 0.10649
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.668
ELB improved by 0.0910537
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.589
ELB improved by 0.0788656
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.524
ELB improved by 0.065059
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.474
ELB improved by 0.050569
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.436
ELB improved by 0.0379727
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.407
ELB improved by 0.0285531
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.385
ELB improved by 0.0220843
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.367
ELB improved by 0.0177707
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.352
ELB improved by 0.0148702
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.339
ELB improved by 0.012862
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.328
ELB improved by 0.0114175
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.318
ELB improved by 0.0103366
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.308
ELB improved by 0.00949743
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-866.369
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-576.393
ELB improved by 289.976
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-515.105
ELB improved by 61.2877
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-474.976
ELB improved by 40.1291
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.602
ELB improved by 18.3741
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.51
ELB improved by 9.09212
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.483
ELB improved by 6.02711
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.256
ELB improved by 5.22709
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.118
ELB improved by 5.13766
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.146
ELB improved by 4.97148
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.797
ELB improved by 4.34964
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.388
ELB improved by 3.40886
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.861
ELB improved by 2.52668
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.019
ELB improved by 1.84202
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.733
ELB improved by 1.2862
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.87
ELB improved by 0.86281
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.279
ELB improved by 0.591055
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.849
ELB improved by 0.43053
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.515
ELB improved by 0.334176
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.242
ELB improved by 0.272604
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.011
ELB improved by 0.230453
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.812
ELB improved by 0.199916
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.635
ELB improved by 0.17685
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.476
ELB improved by 0.158896
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.331
ELB improved by 0.144604
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.198
ELB improved by 0.133027
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.075
ELB improved by 0.123513
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.959
ELB improved by 0.115593
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.85
ELB improved by 0.108923
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.747
ELB improved by 0.103238
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.649
ELB improved by 0.0983338
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.555
ELB improved by 0.0940482
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.464
ELB improved by 0.0902525
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.377
ELB improved by 0.0868432
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.294
ELB improved by 0.0837374
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.213
ELB improved by 0.0808694
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.135
ELB improved by 0.0781874
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.059
ELB improved by 0.0756524
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.986
ELB improved by 0.0732357
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.915
ELB improved by 0.0709181
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.846
ELB improved by 0.0686882
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.78
ELB improved by 0.0665414
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.715
ELB improved by 0.0644782
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.653
ELB improved by 0.0625037
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.592
ELB improved by 0.0606258
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.533
ELB improved by 0.0588543
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.476
ELB improved by 0.0572
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.42
ELB improved by 0.0556741
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.366
ELB improved by 0.0542872
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.313
ELB improved by 0.0530494
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.261
ELB improved by 0.0519697
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.21
ELB improved by 0.0510562
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.16
ELB improved by 0.0503163
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.11
ELB improved by 0.0497567
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.06
ELB improved by 0.0493838
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.011
ELB improved by 0.0492046
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.962
ELB improved by 0.0492264
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.913
ELB improved by 0.049458
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.863
ELB improved by 0.0499103
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.812
ELB improved by 0.0505968
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.761
ELB improved by 0.0515347
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.708
ELB improved by 0.0527467
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.654
ELB improved by 0.0542619
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.597
ELB improved by 0.0561192
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.539
ELB improved by 0.0583702
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.478
ELB improved by 0.0610857
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.414
ELB improved by 0.0643634
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.345
ELB improved by 0.0683427
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.272
ELB improved by 0.0732277
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.193
ELB improved by 0.0793278
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.106
ELB improved by 0.0871304
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.008
ELB improved by 0.0974377
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.896
ELB improved by 0.111634
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.764
ELB improved by 0.132224
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.6
ELB improved by 0.163883
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.385
ELB improved by 0.215177
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.086
ELB improved by 0.298908
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.667
ELB improved by 0.419715
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.128
ELB improved by 0.538374
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.536
ELB improved by 0.591738
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.945
ELB improved by 0.591286
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.363
ELB improved by 0.582578
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.787
ELB improved by 0.575886
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.238
ELB improved by 0.548861
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.753
ELB improved by 0.485194
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.327
ELB improved by 0.425551
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.891
ELB improved by 0.436279
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.32
ELB improved by 0.571185
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.545
ELB improved by 0.774782
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.787
ELB improved by 0.75807
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.24
ELB improved by 0.547273
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.849
ELB improved by 0.390047
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.545
ELB improved by 0.304175
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.297
ELB improved by 0.248231
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.101
ELB improved by 0.195759
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.956
ELB improved by 0.145514
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.847
ELB improved by 0.10846
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.76
ELB improved by 0.0874502
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.684
ELB improved by 0.0758042
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.619
ELB improved by 0.0652998
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.566
ELB improved by 0.0526263
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.527
ELB improved by 0.0395919
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.498
ELB improved by 0.0284913
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.478
ELB improved by 0.0199323
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.464
ELB improved by 0.0136772
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.455
ELB improved by 0.00932986
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.939 0.296 3.255
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.053 | 0.020 | 0.075 | |
| getPIPs | 0.053 | 0.017 | 0.070 | |
| graper | 0.084 | 0.022 | 0.106 | |
| makeExampleData | 0.012 | 0.001 | 0.013 | |
| makeExampleDataWithUnequalGroups | 0.013 | 0.001 | 0.014 | |
| plotELBO | 0.360 | 0.021 | 0.385 | |
| plotGroupPenalties | 1.331 | 0.057 | 1.397 | |
| plotPosterior | 0.736 | 0.021 | 0.760 | |
| predict.graper | 2.040 | 0.093 | 2.146 | |
| print.graper | 0.048 | 0.012 | 0.061 | |