Britta Velten
| Snapshot Date: 2026-04-23 13:40 -0400 (Thu, 23 Apr 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 95474d7 |
| git_last_commit_date: 2025-10-29 10:49:21 -0400 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-04-24 11:36 -0400 (Fri, 24 Apr 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.4 LTS) | x86_64 | 4.6.0 RC (2026-04-17 r89917) -- "Because it was There" | 4958 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.6.0 alpha (2026-04-08 r89818) | 4705 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 938/2404 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.27.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| See other builds for graper in R Universe. | ||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.27.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz |
| StartedAt: 2026-04-23 20:05:03 -0400 (Thu, 23 Apr 2026) |
| EndedAt: 2026-04-23 20:05:36 -0400 (Thu, 23 Apr 2026) |
| EllapsedTime: 32.4 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R version 4.6.0 alpha (2026-04-08 r89818)
* using platform: aarch64-apple-darwin23
* R was compiled by
Apple clang version 17.0.0 (clang-1700.3.19.1)
GNU Fortran (GCC) 14.2.0
* running under: macOS Tahoe 26.3.1
* using session charset: UTF-8
* current time: 2026-04-24 00:05:03 UTC
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 17.0.0 (clang-1700.6.4.2)’
* used SDK: ‘MacOSX26.2.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.6/Resources/library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.27.0’ ** using staged installation ** libs using C++ compiler: ‘Apple clang version 17.0.0 (clang-1700.6.4.2)’ using SDK: ‘MacOSX26.2.sdk’ clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o clang++ -arch arm64 -std=gnu++20 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R installing to /Library/Frameworks/R.framework/Versions/4.6/Resources/library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.6.0 alpha (2026-04-08 r89818)
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin23
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-862.577
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-602.672
ELB improved by 259.904
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-542.582
ELB improved by 60.0903
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-495.111
ELB improved by 47.4714
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.236
ELB improved by 24.875
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.917
ELB improved by 10.3185
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.936
ELB improved by 4.98138
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.263
ELB improved by 3.67332
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.903
ELB improved by 3.35913
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.662
ELB improved by 3.24136
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.568
ELB improved by 3.09443
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.731
ELB improved by 2.83628
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.264
ELB improved by 2.46736
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.227
ELB improved by 2.03712
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.619
ELB improved by 1.60793
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.382
ELB improved by 1.2367
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.427
ELB improved by 0.95548
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.673
ELB improved by 0.753621
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.073
ELB improved by 0.60011
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.593
ELB improved by 0.480181
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.199
ELB improved by 0.393777
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.862
ELB improved by 0.336852
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.562
ELB improved by 0.300621
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.284
ELB improved by 0.277364
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.022
ELB improved by 0.262134
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.77
ELB improved by 0.252109
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.524
ELB improved by 0.245768
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.282
ELB improved by 0.242436
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.04
ELB improved by 0.242221
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.793
ELB improved by 0.246411
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.534
ELB improved by 0.25873
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.246
ELB improved by 0.288208
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.894
ELB improved by 0.35246
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.429
ELB improved by 0.464409
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.852
ELB improved by 0.577084
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.243
ELB improved by 0.609545
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.655
ELB improved by 0.587796
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.081
ELB improved by 0.573671
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.499
ELB improved by 0.581855
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.892
ELB improved by 0.607459
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.248
ELB improved by 0.644368
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.561
ELB improved by 0.686155
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.837
ELB improved by 0.724722
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.084
ELB improved by 0.752284
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.317
ELB improved by 0.767379
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.535
ELB improved by 0.782066
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.71
ELB improved by 0.825135
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.78
ELB improved by 0.929307
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.667
ELB improved by 1.11366
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.214
ELB improved by 1.4533
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.521
ELB improved by 1.69245
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.167
ELB improved by 1.35433
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.211
ELB improved by 0.955394
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.468
ELB improved by 0.743642
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.834
ELB improved by 0.633588
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.32
ELB improved by 0.513841
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.952
ELB improved by 0.368293
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.711
ELB improved by 0.241425
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.555
ELB improved by 0.155231
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.452
ELB improved by 0.103168
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.379
ELB improved by 0.0729442
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.324
ELB improved by 0.0554128
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.279
ELB improved by 0.0450405
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.24
ELB improved by 0.0387308
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.205
ELB improved by 0.0347771
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.173
ELB improved by 0.03219
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.143
ELB improved by 0.0303128
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.114
ELB improved by 0.0286343
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.087
ELB improved by 0.0267505
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.063
ELB improved by 0.0244299
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.041
ELB improved by 0.0216896
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.022
ELB improved by 0.0187698
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.006
ELB improved by 0.0159902
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.993
ELB improved by 0.0135911
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.981
ELB improved by 0.0116642
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.971
ELB improved by 0.0101805
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.962
ELB improved by 0.00905325
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-888.253
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-552.355
ELB improved by 335.899
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-495.522
ELB improved by 56.8332
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.062
ELB improved by 28.4601
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.602
ELB improved by 10.4594
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.698
ELB improved by 4.90391
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.159
ELB improved by 3.5396
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.031
ELB improved by 3.12763
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.014
ELB improved by 3.01675
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.978
ELB improved by 3.03599
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.843
ELB improved by 3.13505
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.562
ELB improved by 3.2813
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.157
ELB improved by 3.40456
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.785
ELB improved by 3.37242
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.746
ELB improved by 3.03919
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.348
ELB improved by 2.39757
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.693
ELB improved by 1.65542
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.638
ELB improved by 1.05451
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.964
ELB improved by 0.6742
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.501
ELB improved by 0.462876
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.152
ELB improved by 0.349512
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.864
ELB improved by 0.287175
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.614
ELB improved by 0.250605
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.387
ELB improved by 0.226677
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.179
ELB improved by 0.208565
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.985
ELB improved by 0.193312
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.805
ELB improved by 0.180447
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.635
ELB improved by 0.170377
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.471
ELB improved by 0.163218
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.313
ELB improved by 0.158621
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.157
ELB improved by 0.156084
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.001
ELB improved by 0.155152
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.846
ELB improved by 0.155411
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.69
ELB improved by 0.156416
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.532
ELB improved by 0.157664
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.373
ELB improved by 0.158663
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.214
ELB improved by 0.15909
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.055
ELB improved by 0.158901
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.897
ELB improved by 0.158315
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.739
ELB improved by 0.157681
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.582
ELB improved by 0.157369
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.424
ELB improved by 0.157734
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.265
ELB improved by 0.159161
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.103
ELB improved by 0.162141
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.935
ELB improved by 0.167415
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.759
ELB improved by 0.176242
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.568
ELB improved by 0.191002
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.352
ELB improved by 0.216694
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.087
ELB improved by 0.26476
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.725
ELB improved by 0.361335
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.181
ELB improved by 0.544501
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.436
ELB improved by 0.745392
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.707
ELB improved by 0.728401
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.092
ELB improved by 0.614892
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.513
ELB improved by 0.579073
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.92
ELB improved by 0.593417
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.284
ELB improved by 0.635951
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.556
ELB improved by 0.727488
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.659
ELB improved by 0.89723
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.694
ELB improved by 0.965202
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.951
ELB improved by 0.742679
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.471
ELB improved by 0.480006
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.153
ELB improved by 0.317822
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.928
ELB improved by 0.22551
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.76
ELB improved by 0.167664
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.632
ELB improved by 0.128089
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.532
ELB improved by 0.0997217
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.454
ELB improved by 0.0786255
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.391
ELB improved by 0.062352
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.342
ELB improved by 0.0496048
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.302
ELB improved by 0.0397621
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.27
ELB improved by 0.0323706
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.243
ELB improved by 0.0269385
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.22
ELB improved by 0.0229672
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.2
ELB improved by 0.0200287
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.182
ELB improved by 0.0177994
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.166
ELB improved by 0.0160545
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.151
ELB improved by 0.0146444
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.138
ELB improved by 0.0134716
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.125
ELB improved by 0.0124722
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.114
ELB improved by 0.0116035
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.103
ELB improved by 0.0108365
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.093
ELB improved by 0.0101502
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.083
ELB improved by 0.00952953
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-889.191
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-585.022
ELB improved by 304.169
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-522.808
ELB improved by 62.2141
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-482.048
ELB improved by 40.7602
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.871
ELB improved by 17.1772
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.859
ELB improved by 7.01164
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.444
ELB improved by 4.41514
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.562
ELB improved by 3.88245
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.563
ELB improved by 3.99821
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.124
ELB improved by 4.43904
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.033
ELB improved by 5.09137
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.244
ELB improved by 5.78922
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.153
ELB improved by 6.09067
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.807
ELB improved by 5.34619
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.995
ELB improved by 3.81149
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.55
ELB improved by 2.44528
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.965
ELB improved by 1.58542
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.854
ELB improved by 1.11013
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.989
ELB improved by 0.865133
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.239
ELB improved by 0.74996
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.537
ELB improved by 0.702077
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.854
ELB improved by 0.683753
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.175
ELB improved by 0.678911
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.49
ELB improved by 0.684352
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.792
ELB improved by 0.698295
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.074
ELB improved by 0.718191
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.331
ELB improved by 0.742753
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.559
ELB improved by 0.772541
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.75
ELB improved by 0.808954
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.897
ELB improved by 0.85231
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.998
ELB improved by 0.899668
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.054
ELB improved by 0.943283
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.083
ELB improved by 0.9708
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.115
ELB improved by 0.968208
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.19
ELB improved by 0.92524
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.35
ELB improved by 0.840495
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.627
ELB improved by 0.723055
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.037
ELB improved by 0.589929
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.576
ELB improved by 0.460244
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.228
ELB improved by 0.348359
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.968
ELB improved by 0.260117
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.774
ELB improved by 0.194242
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.627
ELB improved by 0.146195
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.516
ELB improved by 0.111204
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.431
ELB improved by 0.0855147
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.364
ELB improved by 0.0664921
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.312
ELB improved by 0.0523262
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.27
ELB improved by 0.0417367
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.236
ELB improved by 0.0337864
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.209
ELB improved by 0.0277785
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.185
ELB improved by 0.0231965
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.166
ELB improved by 0.0196615
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.149
ELB improved by 0.0168982
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.134
ELB improved by 0.0147079
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.121
ELB improved by 0.0129473
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.11
ELB improved by 0.0115127
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.099
ELB improved by 0.0103284
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.09
ELB improved by 0.00933888
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-868.799
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-577.518
ELB improved by 291.281
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-523.342
ELB improved by 54.1756
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-488.289
ELB improved by 35.0531
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.574
ELB improved by 16.7152
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.31
ELB improved by 7.26325
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.364
ELB improved by 4.94586
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.608
ELB improved by 4.7562
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.459
ELB improved by 5.1491
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.883
ELB improved by 5.57646
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.413
ELB improved by 5.46963
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.786
ELB improved by 4.62724
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.357
ELB improved by 3.42894
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.006
ELB improved by 2.35103
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.405
ELB improved by 1.60093
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.269
ELB improved by 1.13562
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.455
ELB improved by 0.814285
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.889
ELB improved by 0.566419
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.491
ELB improved by 0.397104
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.195
ELB improved by 0.295968
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.959
ELB improved by 0.236388
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.76
ELB improved by 0.198681
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.588
ELB improved by 0.172665
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.434
ELB improved by 0.153493
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.296
ELB improved by 0.13875
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.168
ELB improved by 0.127111
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.051
ELB improved by 0.117785
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.94
ELB improved by 0.110266
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.836
ELB improved by 0.104212
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.737
ELB improved by 0.0993882
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.641
ELB improved by 0.0956264
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.548
ELB improved by 0.0928078
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.457
ELB improved by 0.0908454
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.368
ELB improved by 0.0896711
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.279
ELB improved by 0.089221
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.189
ELB improved by 0.0894193
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.099
ELB improved by 0.0901615
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.008
ELB improved by 0.0913039
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.915
ELB improved by 0.0926677
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.821
ELB improved by 0.0940671
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.726
ELB improved by 0.0953576
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.629
ELB improved by 0.0964813
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.532
ELB improved by 0.0974828
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.433
ELB improved by 0.0984854
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.333
ELB improved by 0.0996471
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.232
ELB improved by 0.101128
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.129
ELB improved by 0.103081
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.024
ELB improved by 0.105666
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.915
ELB improved by 0.109068
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.801
ELB improved by 0.113526
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.682
ELB improved by 0.11934
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.555
ELB improved by 0.126857
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.418
ELB improved by 0.136367
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.271
ELB improved by 0.14788
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.11
ELB improved by 0.160855
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.935
ELB improved by 0.174232
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.748
ELB improved by 0.187171
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.548
ELB improved by 0.199956
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.334
ELB improved by 0.214033
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.103
ELB improved by 0.23152
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.848
ELB improved by 0.255242
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.56
ELB improved by 0.288029
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.232
ELB improved by 0.327337
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.876
ELB improved by 0.35661
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.52
ELB improved by 0.355537
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.192
ELB improved by 0.328177
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.898
ELB improved by 0.293716
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.636
ELB improved by 0.261866
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.402
ELB improved by 0.233997
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.192
ELB improved by 0.210278
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415
ELB improved by 0.191813
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.819
ELB improved by 0.18091
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.637
ELB improved by 0.181904
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.434
ELB improved by 0.20367
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.169
ELB improved by 0.264331
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.777
ELB improved by 0.391914
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.181
ELB improved by 0.596431
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.355
ELB improved by 0.825861
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.426
ELB improved by 0.929066
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.683
ELB improved by 0.742807
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.217
ELB improved by 0.466406
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.929
ELB improved by 0.288306
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.735
ELB improved by 0.193372
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.594
ELB improved by 0.140881
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.487
ELB improved by 0.107699
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.403
ELB improved by 0.083346
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.339
ELB improved by 0.0646517
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.287
ELB improved by 0.0513308
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.244
ELB improved by 0.0430493
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.205
ELB improved by 0.0388344
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.168
ELB improved by 0.0375419
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.13
ELB improved by 0.0381333
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.09
ELB improved by 0.0396461
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.049
ELB improved by 0.0412147
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.006
ELB improved by 0.0424272
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.963
ELB improved by 0.0439022
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.915
ELB improved by 0.0475794
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.859
ELB improved by 0.0563296
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.786
ELB improved by 0.0723254
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.694
ELB improved by 0.0921919
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.593
ELB improved by 0.101413
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.506
ELB improved by 0.0864376
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.449
ELB improved by 0.0573969
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.415
ELB improved by 0.0334866
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.395
ELB improved by 0.0200534
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.382
ELB improved by 0.0136248
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.371
ELB improved by 0.0105869
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.362
ELB improved by 0.00900901
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
1.067 0.089 1.161
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.030 | 0.006 | 0.038 | |
| getPIPs | 0.027 | 0.007 | 0.036 | |
| graper | 0.044 | 0.010 | 0.055 | |
| makeExampleData | 0.004 | 0.000 | 0.004 | |
| makeExampleDataWithUnequalGroups | 0.004 | 0.000 | 0.005 | |
| plotELBO | 0.130 | 0.009 | 0.144 | |
| plotGroupPenalties | 0.433 | 0.012 | 0.445 | |
| plotPosterior | 0.224 | 0.011 | 0.237 | |
| predict.graper | 1.023 | 0.046 | 1.074 | |
| print.graper | 0.026 | 0.006 | 0.033 | |