Britta Velten
| Snapshot Date: 2025-12-05 13:40 -0500 (Fri, 05 Dec 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 95474d7 |
| git_last_commit_date: 2025-10-29 10:49:21 -0500 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2025-12-06 11:35 -0500 (Sat, 06 Dec 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2025-10-20 r88955) -- "Unsuffered Consequences" | 4869 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | R Under development (unstable) (2025-11-04 r88984) -- "Unsuffered Consequences" | 4576 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 914/2331 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.27.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.27.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz |
| StartedAt: 2025-12-05 20:15:37 -0500 (Fri, 05 Dec 2025) |
| EndedAt: 2025-12-05 20:16:08 -0500 (Fri, 05 Dec 2025) |
| EllapsedTime: 31.4 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R Under development (unstable) (2025-11-04 r88984)
* using platform: aarch64-apple-darwin20
* R was compiled by
Apple clang version 16.0.0 (clang-1600.0.26.6)
GNU Fortran (GCC) 14.2.0
* running under: macOS Ventura 13.7.8
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’
* used SDK: ‘MacOSX11.3.1.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.27.0’ ** using staged installation ** libs using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’ using SDK: ‘MacOSX11.3.1.sdk’ clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R installing to /Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R Under development (unstable) (2025-11-04 r88984) -- "Unsuffered Consequences"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin20
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-880.36
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-562.14
ELB improved by 318.219
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-503.889
ELB improved by 58.2516
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.799
ELB improved by 33.0895
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.799
ELB improved by 12.9999
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.695
ELB improved by 5.10436
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.732
ELB improved by 2.96357
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.451
ELB improved by 2.2809
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.461
ELB improved by 1.99014
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.621
ELB improved by 1.83988
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.873
ELB improved by 1.74781
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.19
ELB improved by 1.68247
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.559
ELB improved by 1.6316
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.971
ELB improved by 1.58763
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.432
ELB improved by 1.53958
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.961
ELB improved by 1.47018
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.601
ELB improved by 1.36071
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.397
ELB improved by 1.20411
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.382
ELB improved by 1.01437
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.564
ELB improved by 0.818463
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.923
ELB improved by 0.640872
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.427
ELB improved by 0.495572
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.042
ELB improved by 0.385516
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.736
ELB improved by 0.306031
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.486
ELB improved by 0.249552
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.277
ELB improved by 0.20899
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.098
ELB improved by 0.179015
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.942
ELB improved by 0.156047
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.804
ELB improved by 0.13781
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.681
ELB improved by 0.12289
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.571
ELB improved by 0.110413
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.471
ELB improved by 0.0998304
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.38
ELB improved by 0.0907849
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.297
ELB improved by 0.0830307
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.221
ELB improved by 0.0763868
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.15
ELB improved by 0.0707111
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.084
ELB improved by 0.0658869
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.023
ELB improved by 0.0618171
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.964
ELB improved by 0.0584206
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.909
ELB improved by 0.0556304
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.855
ELB improved by 0.0533919
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.803
ELB improved by 0.0516616
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.753
ELB improved by 0.0504048
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.703
ELB improved by 0.049594
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.654
ELB improved by 0.0492069
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.605
ELB improved by 0.0492248
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.555
ELB improved by 0.0496297
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.505
ELB improved by 0.0504034
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.453
ELB improved by 0.051525
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.401
ELB improved by 0.05297
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.346
ELB improved by 0.0547093
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.289
ELB improved by 0.0567096
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.23
ELB improved by 0.0589345
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.169
ELB improved by 0.0613464
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.105
ELB improved by 0.0639096
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.038
ELB improved by 0.0665942
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.969
ELB improved by 0.0693804
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.897
ELB improved by 0.072263
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.821
ELB improved by 0.0752566
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.743
ELB improved by 0.0784004
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.661
ELB improved by 0.0817645
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.576
ELB improved by 0.0854571
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.486
ELB improved by 0.0896337
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.392
ELB improved by 0.0945134
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.291
ELB improved by 0.100403
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.183
ELB improved by 0.107738
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.066
ELB improved by 0.117149
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.937
ELB improved by 0.129565
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.79
ELB improved by 0.146365
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.621
ELB improved by 0.169558
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.419
ELB improved by 0.201816
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.173
ELB improved by 0.245886
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.871
ELB improved by 0.302529
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.503
ELB improved by 0.367405
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.072
ELB improved by 0.431193
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.586
ELB improved by 0.485745
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.058
ELB improved by 0.528512
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.497
ELB improved by 0.560767
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.911
ELB improved by 0.58583
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.303
ELB improved by 0.607734
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.676
ELB improved by 0.627326
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.038
ELB improved by 0.638496
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.407
ELB improved by 0.630541
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.812
ELB improved by 0.595453
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.278
ELB improved by 0.53348
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.824
ELB improved by 0.454234
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.452
ELB improved by 0.37177
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.154
ELB improved by 0.297836
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.916
ELB improved by 0.238749
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.72
ELB improved by 0.195863
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.552
ELB improved by 0.167874
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.398
ELB improved by 0.153901
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.242
ELB improved by 0.156233
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.061
ELB improved by 0.180483
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.832
ELB improved by 0.229282
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.544
ELB improved by 0.28773
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.219
ELB improved by 0.324874
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.882
ELB improved by 0.337347
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.522
ELB improved by 0.35981
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.11
ELB improved by 0.412319
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.657
ELB improved by 0.452398
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.198
ELB improved by 0.459638
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.681
ELB improved by 0.516819
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.071
ELB improved by 0.610184
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.428
ELB improved by 0.642783
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.865
ELB improved by 0.562634
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.436
ELB improved by 0.429771
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.098
ELB improved by 0.337411
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.796
ELB improved by 0.302518
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.512
ELB improved by 0.283223
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.273
ELB improved by 0.239113
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.099
ELB improved by 0.174609
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.983
ELB improved by 0.115691
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.907
ELB improved by 0.0758632
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.854
ELB improved by 0.0530639
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.814
ELB improved by 0.0400425
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.782
ELB improved by 0.0315846
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.757
ELB improved by 0.0253028
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.737
ELB improved by 0.0203611
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.72
ELB improved by 0.016487
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.707
ELB improved by 0.013527
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.695
ELB improved by 0.0113202
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.686
ELB improved by 0.00969762
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-846.937
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-565.834
ELB improved by 281.103
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-505.728
ELB improved by 60.1053
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.432
ELB improved by 38.2964
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.293
ELB improved by 16.1391
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.888
ELB improved by 6.40464
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.231
ELB improved by 3.65722
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.319
ELB improved by 2.91194
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.491
ELB improved by 2.82781
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.443
ELB improved by 3.04827
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.972
ELB improved by 3.47119
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.937
ELB improved by 4.03453
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.375
ELB improved by 4.56178
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.679
ELB improved by 4.69604
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.52
ELB improved by 4.1593
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.401
ELB improved by 3.11876
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.317
ELB improved by 2.0846
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.935
ELB improved by 1.38138
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.941
ELB improved by 0.993851
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.142
ELB improved by 0.799911
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.433
ELB improved by 0.708646
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.762
ELB improved by 0.671051
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.099
ELB improved by 0.663278
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.424
ELB improved by 0.674159
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.726
ELB improved by 0.698628
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.991
ELB improved by 0.734403
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.211
ELB improved by 0.779996
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.378
ELB improved by 0.833053
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.49
ELB improved by 0.888624
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.552
ELB improved by 0.937564
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.586
ELB improved by 0.966193
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.627
ELB improved by 0.959413
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.718
ELB improved by 0.908837
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.896
ELB improved by 0.821275
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.18
ELB improved by 0.71679
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.565
ELB improved by 0.614974
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.042
ELB improved by 0.522842
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.606
ELB improved by 0.43609
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.254
ELB improved by 0.351858
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.978
ELB improved by 0.276131
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.76
ELB improved by 0.217821
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.579
ELB improved by 0.18133
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.413
ELB improved by 0.165339
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.249
ELB improved by 0.16463
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.079
ELB improved by 0.16985
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.911
ELB improved by 0.167654
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.762
ELB improved by 0.149057
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.643
ELB improved by 0.118798
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.555
ELB improved by 0.0886404
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.489
ELB improved by 0.0652898
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.44
ELB improved by 0.0491328
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.402
ELB improved by 0.0382382
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.371
ELB improved by 0.0307396
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.346
ELB improved by 0.0253824
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.324
ELB improved by 0.0214142
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.306
ELB improved by 0.0183882
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.29
ELB improved by 0.016026
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.276
ELB improved by 0.0141437
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.263
ELB improved by 0.0126145
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.252
ELB improved by 0.011349
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.242
ELB improved by 0.0102838
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.232
ELB improved by 0.00937374
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-894.038
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-604.045
ELB improved by 289.994
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-541.39
ELB improved by 62.6549
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-499.087
ELB improved by 42.303
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-479.34
ELB improved by 19.7464
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.535
ELB improved by 8.80569
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.78
ELB improved by 5.75431
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.412
ELB improved by 5.36811
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.713
ELB improved by 5.69896
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.855
ELB improved by 5.85832
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.541
ELB improved by 5.31407
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.38
ELB improved by 4.16102
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.421
ELB improved by 2.95905
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.37
ELB improved by 2.05056
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.929
ELB improved by 1.44093
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.888
ELB improved by 1.04075
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.111
ELB improved by 0.777271
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.51
ELB improved by 0.601191
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.03
ELB improved by 0.480027
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.636
ELB improved by 0.393496
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.307
ELB improved by 0.329424
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.027
ELB improved by 0.280522
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.784
ELB improved by 0.242302
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.572
ELB improved by 0.211885
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.385
ELB improved by 0.187337
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.218
ELB improved by 0.167311
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.067
ELB improved by 0.150834
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.93
ELB improved by 0.137184
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.804
ELB improved by 0.125816
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.688
ELB improved by 0.116312
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.579
ELB improved by 0.108343
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.478
ELB improved by 0.101653
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.382
ELB improved by 0.0960366
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.29
ELB improved by 0.0913296
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.203
ELB improved by 0.087401
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.119
ELB improved by 0.0841449
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.037
ELB improved by 0.0814771
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.958
ELB improved by 0.0793306
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.88
ELB improved by 0.0776534
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.804
ELB improved by 0.0764067
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.728
ELB improved by 0.0755636
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.653
ELB improved by 0.0751077
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.578
ELB improved by 0.0750332
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.503
ELB improved by 0.0753441
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.427
ELB improved by 0.0760539
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.349
ELB improved by 0.077185
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.271
ELB improved by 0.0787682
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.19
ELB improved by 0.0808407
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.106
ELB improved by 0.0834438
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.02
ELB improved by 0.0866191
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.929
ELB improved by 0.0904035
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.835
ELB improved by 0.0948256
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.735
ELB improved by 0.099905
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.629
ELB improved by 0.105659
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.517
ELB improved by 0.112122
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.398
ELB improved by 0.119371
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.27
ELB improved by 0.127562
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.133
ELB improved by 0.136962
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.985
ELB improved by 0.147978
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.824
ELB improved by 0.161199
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.646
ELB improved by 0.177447
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.449
ELB improved by 0.197822
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.225
ELB improved by 0.223565
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.97
ELB improved by 0.25532
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.678
ELB improved by 0.291386
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.352
ELB improved by 0.326247
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.999
ELB improved by 0.353456
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.627
ELB improved by 0.371802
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.241
ELB improved by 0.385383
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.843
ELB improved by 0.398235
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.432
ELB improved by 0.410728
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.016
ELB improved by 0.415969
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.617
ELB improved by 0.399604
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.262
ELB improved by 0.355239
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.965
ELB improved by 0.296224
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.726
ELB improved by 0.239483
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.534
ELB improved by 0.192107
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.379
ELB improved by 0.154358
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.255
ELB improved by 0.124425
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.155
ELB improved by 0.100407
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.074
ELB improved by 0.0808798
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.009
ELB improved by 0.0649192
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.957
ELB improved by 0.0519537
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.915
ELB improved by 0.0415881
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.882
ELB improved by 0.0334776
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.855
ELB improved by 0.0272724
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.832
ELB improved by 0.02262
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.813
ELB improved by 0.0191943
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.796
ELB improved by 0.0167196
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.781
ELB improved by 0.0149794
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.767
ELB improved by 0.0138129
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.754
ELB improved by 0.0131025
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.741
ELB improved by 0.0127598
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.729
ELB improved by 0.0127091
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.716
ELB improved by 0.0128703
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.703
ELB improved by 0.0131429
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.689
ELB improved by 0.0133977
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.676
ELB improved by 0.0134837
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.662
ELB improved by 0.0132599
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.65
ELB improved by 0.0126438
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.638
ELB improved by 0.0116512
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.628
ELB improved by 0.0103959
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.619
ELB improved by 0.00904478
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-839.815
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-582.016
ELB improved by 257.799
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-521.715
ELB improved by 60.3007
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-479.089
ELB improved by 42.6258
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.465
ELB improved by 19.6248
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.429
ELB improved by 9.03572
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.326
ELB improved by 6.10318
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.693
ELB improved by 5.633
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.982
ELB improved by 5.71045
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.649
ELB improved by 5.33285
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.441
ELB improved by 4.20861
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.559
ELB improved by 2.88172
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.653
ELB improved by 1.90615
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.322
ELB improved by 1.33135
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.339
ELB improved by 0.98287
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.599
ELB improved by 0.740035
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.033
ELB improved by 0.56523
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.587
ELB improved by 0.446887
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.215
ELB improved by 0.372018
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.888
ELB improved by 0.326163
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.591
ELB improved by 0.297886
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.311
ELB improved by 0.279886
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.043
ELB improved by 0.267927
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.783
ELB improved by 0.259601
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.53
ELB improved by 0.253504
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.281
ELB improved by 0.24881
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.036
ELB improved by 0.245054
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.794
ELB improved by 0.242024
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.554
ELB improved by 0.239703
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.316
ELB improved by 0.238225
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.078
ELB improved by 0.237838
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.839
ELB improved by 0.23888
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.597
ELB improved by 0.241761
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.35
ELB improved by 0.246958
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.095
ELB improved by 0.255041
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.829
ELB improved by 0.266705
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.546
ELB improved by 0.282864
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.241
ELB improved by 0.304772
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.907
ELB improved by 0.334196
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.533
ELB improved by 0.373523
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.108
ELB improved by 0.425428
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.616
ELB improved by 0.491589
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.045
ELB improved by 0.571265
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.382
ELB improved by 0.663186
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.618
ELB improved by 0.763862
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.776
ELB improved by 0.842188
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.928
ELB improved by 0.848061
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.14
ELB improved by 0.787786
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.441
ELB improved by 0.698616
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.836
ELB improved by 0.605462
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.306
ELB improved by 0.529832
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.814
ELB improved by 0.492141
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.308
ELB improved by 0.506177
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.745
ELB improved by 0.562395
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.144
ELB improved by 0.601066
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.609
ELB improved by 0.534773
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.221
ELB improved by 0.388532
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.957
ELB improved by 0.264191
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.772
ELB improved by 0.184939
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.639
ELB improved by 0.133079
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.543
ELB improved by 0.0958541
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.474
ELB improved by 0.0687004
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.425
ELB improved by 0.0495454
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.388
ELB improved by 0.0363409
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.361
ELB improved by 0.0272362
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.34
ELB improved by 0.0208811
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.324
ELB improved by 0.0163781
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.311
ELB improved by 0.0131402
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.3
ELB improved by 0.0107786
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.291
ELB improved by 0.00903183
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
1.052 0.094 1.174
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.014 | 0.006 | 0.020 | |
| getPIPs | 0.011 | 0.005 | 0.017 | |
| graper | 0.026 | 0.008 | 0.034 | |
| makeExampleData | 0.002 | 0.001 | 0.003 | |
| makeExampleDataWithUnequalGroups | 0.002 | 0.000 | 0.003 | |
| plotELBO | 0.113 | 0.010 | 0.125 | |
| plotGroupPenalties | 0.442 | 0.010 | 0.464 | |
| plotPosterior | 0.216 | 0.010 | 0.225 | |
| predict.graper | 0.213 | 0.025 | 0.240 | |
| print.graper | 0.012 | 0.005 | 0.017 | |