Britta Velten
| Snapshot Date: 2026-03-09 13:40 -0400 (Mon, 09 Mar 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 95474d7 |
| git_last_commit_date: 2025-10-29 10:49:21 -0400 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-03-10 11:33 -0400 (Tue, 10 Mar 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2026-03-05 r89546) -- "Unsuffered Consequences" | 4522 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | R Under development (unstable) (2026-03-01 r89506) -- "Unsuffered Consequences" | 2847 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 928/2360 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.27.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | ERROR | |||||||||
| See other builds for graper in R Universe. | ||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.27.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz |
| StartedAt: 2026-03-09 16:20:47 -0400 (Mon, 09 Mar 2026) |
| EndedAt: 2026-03-09 16:21:14 -0400 (Mon, 09 Mar 2026) |
| EllapsedTime: 27.5 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R Under development (unstable) (2026-03-01 r89506)
* using platform: aarch64-apple-darwin23
* R was compiled by
Apple clang version 17.0.0 (clang-1700.3.19.1)
GNU Fortran (GCC) 14.2.0
* running under: macOS Sonoma 14.8.3
* using session charset: UTF-8
* current time: 2026-03-09 20:20:47 UTC
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.3.9.4)’
* used SDK: ‘MacOSX14.4.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.6/Resources/library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.27.0’ ** using staged installation ** libs using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.3.9.4)’ using SDK: ‘MacOSX14.4.sdk’ clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o clang++ -arch arm64 -std=gnu++20 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R installing to /Library/Frameworks/R.framework/Versions/4.6/Resources/library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R Under development (unstable) (2026-03-01 r89506) -- "Unsuffered Consequences"
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin23
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-881.774
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-566.852
ELB improved by 314.923
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-509.694
ELB improved by 57.1577
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-476.967
ELB improved by 32.7265
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.234
ELB improved by 13.7337
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.189
ELB improved by 6.0445
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.542
ELB improved by 3.64775
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.575
ELB improved by 2.9669
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.744
ELB improved by 2.83073
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.867
ELB improved by 2.87736
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.919
ELB improved by 2.94773
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.025
ELB improved by 2.89411
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.424
ELB improved by 2.6011
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.333
ELB improved by 2.0908
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.798
ELB improved by 1.5344
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.699
ELB improved by 1.09919
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.868
ELB improved by 0.831431
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.179
ELB improved by 0.689145
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.559
ELB improved by 0.619588
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.964
ELB improved by 0.594849
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.357
ELB improved by 0.606883
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.703
ELB improved by 0.654253
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.967
ELB improved by 0.736283
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.119
ELB improved by 0.848056
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.147
ELB improved by 0.971508
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.067
ELB improved by 1.07981
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.902
ELB improved by 1.16548
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.655
ELB improved by 1.24676
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.31
ELB improved by 1.34495
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.837
ELB improved by 1.47332
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.205
ELB improved by 1.63221
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.415
ELB improved by 1.78986
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.528
ELB improved by 1.88711
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.582
ELB improved by 1.94601
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.673
ELB improved by 1.9087
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.184
ELB improved by 1.48936
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.223
ELB improved by 0.960549
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.626
ELB improved by 0.5973
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.241
ELB improved by 0.385186
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.977
ELB improved by 0.263357
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.787
ELB improved by 0.19063
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.642
ELB improved by 0.14471
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.528
ELB improved by 0.114062
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.435
ELB improved by 0.0925869
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.358
ELB improved by 0.076914
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.293
ELB improved by 0.0650881
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.237
ELB improved by 0.0559181
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.189
ELB improved by 0.0486452
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.146
ELB improved by 0.0427656
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.108
ELB improved by 0.0379336
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.074
ELB improved by 0.0339053
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.044
ELB improved by 0.0305047
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.016
ELB improved by 0.0276027
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.991
ELB improved by 0.0251027
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.968
ELB improved by 0.0229318
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.947
ELB improved by 0.0210336
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.928
ELB improved by 0.0193645
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.91
ELB improved by 0.0178896
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.893
ELB improved by 0.0165812
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.878
ELB improved by 0.0154169
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.863
ELB improved by 0.014378
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.85
ELB improved by 0.0134494
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.837
ELB improved by 0.0126182
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.825
ELB improved by 0.0118738
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.814
ELB improved by 0.0112073
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.804
ELB improved by 0.010611
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.793
ELB improved by 0.0100789
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.784
ELB improved by 0.00960579
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-861.844
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-566.938
ELB improved by 294.906
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-506.653
ELB improved by 60.2852
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.386
ELB improved by 36.267
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.426
ELB improved by 13.9592
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.478
ELB improved by 5.94831
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.668
ELB improved by 3.80982
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.38
ELB improved by 3.2886
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.048
ELB improved by 3.33127
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.463
ELB improved by 3.58572
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.582
ELB improved by 3.88033
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.567
ELB improved by 4.01509
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.8
ELB improved by 3.76684
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.704
ELB improved by 3.09589
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.457
ELB improved by 2.24712
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.938
ELB improved by 1.51905
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.91
ELB improved by 1.02831
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.176
ELB improved by 0.733781
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.617
ELB improved by 0.558937
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.168
ELB improved by 0.449163
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.794
ELB improved by 0.374581
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.473
ELB improved by 0.320216
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.195
ELB improved by 0.278573
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.949
ELB improved by 0.245699
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.73
ELB improved by 0.219299
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.532
ELB improved by 0.197884
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.351
ELB improved by 0.180397
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.185
ELB improved by 0.166065
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.031
ELB improved by 0.154312
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.886
ELB improved by 0.144705
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.749
ELB improved by 0.136907
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.619
ELB improved by 0.130637
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.493
ELB improved by 0.125655
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.371
ELB improved by 0.121751
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.253
ELB improved by 0.118742
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.136
ELB improved by 0.116473
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.021
ELB improved by 0.114819
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.908
ELB improved by 0.11368
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.795
ELB improved by 0.11298
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.682
ELB improved by 0.11267
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.569
ELB improved by 0.11272
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.456
ELB improved by 0.113124
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.342
ELB improved by 0.113896
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.227
ELB improved by 0.115071
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.111
ELB improved by 0.116703
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.992
ELB improved by 0.118863
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.87
ELB improved by 0.121643
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.745
ELB improved by 0.125145
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.615
ELB improved by 0.129481
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.481
ELB improved by 0.134771
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.34
ELB improved by 0.141123
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.191
ELB improved by 0.14863
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.034
ELB improved by 0.157344
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.866
ELB improved by 0.167251
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.688
ELB improved by 0.178246
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.498
ELB improved by 0.190092
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.296
ELB improved by 0.20239
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.081
ELB improved by 0.214548
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.855
ELB improved by 0.225754
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.62
ELB improved by 0.234979
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.379
ELB improved by 0.241026
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.137
ELB improved by 0.242663
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.898
ELB improved by 0.238856
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.669
ELB improved by 0.229061
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.455
ELB improved by 0.213478
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.262
ELB improved by 0.193124
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.092
ELB improved by 0.169666
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.947
ELB improved by 0.145044
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.826
ELB improved by 0.121062
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.727
ELB improved by 0.0990784
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.647
ELB improved by 0.0798952
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.584
ELB improved by 0.0637979
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.533
ELB improved by 0.0506942
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.493
ELB improved by 0.0402687
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.46
ELB improved by 0.0321094
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.435
ELB improved by 0.0257938
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.414
ELB improved by 0.020937
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.397
ELB improved by 0.0172116
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.382
ELB improved by 0.0143516
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.37
ELB improved by 0.0121477
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.36
ELB improved by 0.0104383
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.35
ELB improved by 0.00910091
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-870.137
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-576.537
ELB improved by 293.601
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-514.575
ELB improved by 61.9619
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-473.975
ELB improved by 40.5997
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.647
ELB improved by 17.3279
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.604
ELB improved by 7.0433
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.5
ELB improved by 4.10402
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.244
ELB improved by 3.2562
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.257
ELB improved by 2.98663
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.339
ELB improved by 2.91795
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.422
ELB improved by 2.91728
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.514
ELB improved by 2.90718
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.693
ELB improved by 2.82178
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.082
ELB improved by 2.61082
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.814
ELB improved by 2.26814
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.977
ELB improved by 1.83712
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.592
ELB improved by 1.38415
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.618
ELB improved by 0.974897
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.964
ELB improved by 0.653658
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.533
ELB improved by 0.430467
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.245
ELB improved by 0.288512
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.043
ELB improved by 0.202179
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.893
ELB improved by 0.14989
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.775
ELB improved by 0.117407
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.679
ELB improved by 0.0963334
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.597
ELB improved by 0.0819318
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.526
ELB improved by 0.071556
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.462
ELB improved by 0.0637104
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.404
ELB improved by 0.0575288
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.352
ELB improved by 0.0524917
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.304
ELB improved by 0.0482751
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.259
ELB improved by 0.0446676
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.217
ELB improved by 0.0415261
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.179
ELB improved by 0.0387499
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.142
ELB improved by 0.0362663
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.108
ELB improved by 0.0340217
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.076
ELB improved by 0.0319757
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.046
ELB improved by 0.030098
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.018
ELB improved by 0.0283654
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.991
ELB improved by 0.0267601
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.966
ELB improved by 0.025268
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.942
ELB improved by 0.0238782
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.919
ELB improved by 0.0225815
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.898
ELB improved by 0.0213705
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.878
ELB improved by 0.0202385
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.859
ELB improved by 0.0191798
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.84
ELB improved by 0.0181892
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.823
ELB improved by 0.0172617
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.807
ELB improved by 0.0163931
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.791
ELB improved by 0.0155791
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.776
ELB improved by 0.0148159
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.762
ELB improved by 0.0140999
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.749
ELB improved by 0.0134277
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.736
ELB improved by 0.0127964
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.724
ELB improved by 0.012203
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.712
ELB improved by 0.0116449
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.701
ELB improved by 0.0111196
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.691
ELB improved by 0.010625
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.68
ELB improved by 0.010159
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.671
ELB improved by 0.00971954
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-886.215
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-576.309
ELB improved by 309.906
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-515.572
ELB improved by 60.7374
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-479.434
ELB improved by 36.1383
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.378
ELB improved by 15.0557
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.831
ELB improved by 6.54674
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.893
ELB improved by 3.93846
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.651
ELB improved by 3.24141
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.616
ELB improved by 3.03538
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.637
ELB improved by 2.97931
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.673
ELB improved by 2.96318
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.781
ELB improved by 2.89267
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.113
ELB improved by 2.66827
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.861
ELB improved by 2.252
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.139
ELB improved by 1.72138
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.925
ELB improved by 1.21446
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.1
ELB improved by 0.824195
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.537
ELB improved by 0.563676
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.135
ELB improved by 0.401988
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.832
ELB improved by 0.303003
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.591
ELB improved by 0.240555
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.392
ELB improved by 0.198911
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.223
ELB improved by 0.169349
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.076
ELB improved by 0.147149
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.946
ELB improved by 0.129719
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.831
ELB improved by 0.115583
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.727
ELB improved by 0.10385
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.633
ELB improved by 0.0939502
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.547
ELB improved by 0.0854978
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.469
ELB improved by 0.0782184
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.397
ELB improved by 0.0719094
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.331
ELB improved by 0.0664171
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.269
ELB improved by 0.0616222
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.212
ELB improved by 0.0574308
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.158
ELB improved by 0.0537681
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.107
ELB improved by 0.0505737
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.06
ELB improved by 0.0477979
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.014
ELB improved by 0.0453989
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.971
ELB improved by 0.0433406
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.929
ELB improved by 0.0415902
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.889
ELB improved by 0.0401166
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.85
ELB improved by 0.0388893
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.812
ELB improved by 0.0378769
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.775
ELB improved by 0.0370478
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.739
ELB improved by 0.0363697
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.703
ELB improved by 0.0358111
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.668
ELB improved by 0.0353422
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.633
ELB improved by 0.0349366
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.598
ELB improved by 0.0345721
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.564
ELB improved by 0.0342312
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.53
ELB improved by 0.0339009
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.497
ELB improved by 0.0335727
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.463
ELB improved by 0.0332417
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.43
ELB improved by 0.0329058
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.398
ELB improved by 0.0325656
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.366
ELB improved by 0.0322237
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.334
ELB improved by 0.0318847
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.302
ELB improved by 0.0315549
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.271
ELB improved by 0.0312422
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.24
ELB improved by 0.0309566
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.209
ELB improved by 0.030709
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.179
ELB improved by 0.0305125
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.148
ELB improved by 0.030381
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.118
ELB improved by 0.0303301
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.088
ELB improved by 0.0303763
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.057
ELB improved by 0.0305369
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.026
ELB improved by 0.0308295
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.995
ELB improved by 0.0312711
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.963
ELB improved by 0.0318765
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.93
ELB improved by 0.032657
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.897
ELB improved by 0.0336182
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.862
ELB improved by 0.0347575
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.826
ELB improved by 0.036063
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.789
ELB improved by 0.0375136
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.749
ELB improved by 0.0390811
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.709
ELB improved by 0.0407352
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.666
ELB improved by 0.0424499
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.622
ELB improved by 0.0442095
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.576
ELB improved by 0.0460125
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.528
ELB improved by 0.0478727
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.478
ELB improved by 0.0498175
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.426
ELB improved by 0.0518851
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.372
ELB improved by 0.0541218
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.316
ELB improved by 0.0565793
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.256
ELB improved by 0.0593125
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.194
ELB improved by 0.0623784
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.128
ELB improved by 0.0658333
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.059
ELB improved by 0.0697304
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.984
ELB improved by 0.0741161
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.905
ELB improved by 0.0790253
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.821
ELB improved by 0.0844753
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.73
ELB improved by 0.0904587
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.633
ELB improved by 0.0969355
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.53
ELB improved by 0.103826
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.419
ELB improved by 0.111005
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.3
ELB improved by 0.118298
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.175
ELB improved by 0.12549
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.043
ELB improved by 0.132328
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.904
ELB improved by 0.138543
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.76
ELB improved by 0.143861
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.612
ELB improved by 0.148025
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.461
ELB improved by 0.150799
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.309
ELB improved by 0.151979
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.158
ELB improved by 0.151409
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.009
ELB improved by 0.149022
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.864
ELB improved by 0.144918
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.725
ELB improved by 0.139459
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.591
ELB improved by 0.133359
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.463
ELB improved by 0.127769
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.339
ELB improved by 0.124373
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.213
ELB improved by 0.125622
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.078
ELB improved by 0.13518
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.92
ELB improved by 0.158567
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.717
ELB improved by 0.203152
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.443
ELB improved by 0.273636
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.086
ELB improved by 0.356551
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.678
ELB improved by 0.408762
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.281
ELB improved by 0.396358
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.934
ELB improved by 0.347496
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.612
ELB improved by 0.322105
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.273
ELB improved by 0.338521
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.939
ELB improved by 0.334348
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.681
ELB improved by 0.257793
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.518
ELB improved by 0.163395
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.421
ELB improved by 0.0965621
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.364
ELB improved by 0.0573658
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.328
ELB improved by 0.0358595
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.303
ELB improved by 0.0242676
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.286
ELB improved by 0.0179051
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.271
ELB improved by 0.0142371
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.259
ELB improved by 0.0119642
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.249
ELB improved by 0.0104345
iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.24
ELB improved by 0.00932057
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
0.953 0.091 1.054
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.012 | 0.013 | 0.025 | |
| getPIPs | 0.010 | 0.008 | 0.019 | |
| graper | 0.017 | 0.013 | 0.029 | |
| makeExampleData | 0.001 | 0.000 | 0.002 | |
| makeExampleDataWithUnequalGroups | 0.001 | 0.001 | 0.003 | |
| plotELBO | 0.105 | 0.010 | 0.118 | |
| plotGroupPenalties | 0.290 | 0.009 | 0.299 | |
| plotPosterior | 0.265 | 0.019 | 0.501 | |
| predict.graper | 0.212 | 0.042 | 0.280 | |
| print.graper | 0.010 | 0.009 | 0.019 | |