Britta Velten
| Snapshot Date: 2025-12-08 13:45 -0500 (Mon, 08 Dec 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_22 |
| git_last_commit: 76fc31b |
| git_last_commit_date: 2025-10-29 10:49:21 -0500 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-12-11 12:07 -0500 (Thu, 11 Dec 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" | 4879 |
| merida1 | macOS 12.7.6 Monterey | x86_64 | 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" | 4670 |
| kjohnson1 | macOS 13.7.5 Ventura | arm64 | 4.5.2 Patched (2025-11-04 r88984) -- "[Not] Part in a Rumble" | 4604 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4669 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 922/2361 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.26.0 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| merida1 | macOS 12.7.6 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson1 | macOS 13.7.5 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
| Package: graper |
| Version: 1.26.0 |
| Command: /home/biocbuild/R/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings graper_1.26.0.tar.gz |
| StartedAt: 2025-12-09 11:05:30 -0000 (Tue, 09 Dec 2025) |
| EndedAt: 2025-12-09 11:06:58 -0000 (Tue, 09 Dec 2025) |
| EllapsedTime: 88.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/R/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings graper_1.26.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.0 (2025-04-11)
* using platform: aarch64-unknown-linux-gnu
* R was compiled by
aarch64-unknown-linux-gnu-gcc (GCC) 14.2.0
GNU Fortran (GCC) 14.2.0
* running under: openEuler 24.03 (LTS)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.26.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘aarch64-unknown-linux-gnu-g++ (GCC) 14.2.0’
* checking installed package size ... INFO
installed size is 6.0Mb
sub-directories of 1Mb or more:
libs 5.8Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/R/R-4.5.0/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.26.0’ ** using staged installation ** libs using C++ compiler: ‘aarch64-unknown-linux-gnu-g++ (GCC) 14.2.0’ /opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.5.0/include" -DNDEBUG -I'/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.5.0/site-library/RcppArmadillo/include' -I'/home/biocbuild/R/R-4.5.0/site-library/BH/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o /opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.5.0/include" -DNDEBUG -I'/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.5.0/site-library/RcppArmadillo/include' -I'/home/biocbuild/R/R-4.5.0/site-library/BH/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o /opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -shared -L/home/biocbuild/R/R-4.5.0/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -lopenblas -lgfortran -lm -L/home/biocbuild/R/R-4.5.0/lib -lR installing to /home/biocbuild/R/R-4.5.0/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.0 (2025-04-11) -- "How About a Twenty-Six"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: aarch64-unknown-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-887.729
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-565.747
ELB improved by 321.983
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-509.983
ELB improved by 55.7634
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-479.844
ELB improved by 30.1393
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.102
ELB improved by 12.7415
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.076
ELB improved by 6.02601
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.969
ELB improved by 4.10748
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.283
ELB improved by 3.68579
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.647
ELB improved by 3.6357
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.086
ELB improved by 3.56115
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.845
ELB improved by 3.2416
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.202
ELB improved by 2.64277
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.268
ELB improved by 1.93351
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.947
ELB improved by 1.32153
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.054
ELB improved by 0.893197
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.43
ELB improved by 0.623693
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.972
ELB improved by 0.457904
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.619
ELB improved by 0.353122
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.335
ELB improved by 0.283928
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.099
ELB improved by 0.236302
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.896
ELB improved by 0.20244
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.718
ELB improved by 0.177799
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.559
ELB improved by 0.159583
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.413
ELB improved by 0.145968
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.277
ELB improved by 0.13569
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.149
ELB improved by 0.127832
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.028
ELB improved by 0.121709
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.911
ELB improved by 0.116832
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.798
ELB improved by 0.112896
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.688
ELB improved by 0.109776
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.581
ELB improved by 0.107484
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.475
ELB improved by 0.106122
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.369
ELB improved by 0.105823
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.262
ELB improved by 0.106723
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.153
ELB improved by 0.10895
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.04
ELB improved by 0.112646
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.922
ELB improved by 0.117994
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.797
ELB improved by 0.125245
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.662
ELB improved by 0.134745
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.515
ELB improved by 0.146952
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.353
ELB improved by 0.162422
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.171
ELB improved by 0.181759
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.966
ELB improved by 0.205448
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.732
ELB improved by 0.233512
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.467
ELB improved by 0.264817
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.171
ELB improved by 0.296128
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.849
ELB improved by 0.322075
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.511
ELB improved by 0.337877
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.168
ELB improved by 0.343317
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.825
ELB improved by 0.343143
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.481
ELB improved by 0.344372
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.126
ELB improved by 0.355018
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.74
ELB improved by 0.385071
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.294
ELB improved by 0.446152
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.755
ELB improved by 0.539402
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.12
ELB improved by 0.635156
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.41
ELB improved by 0.71007
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.623
ELB improved by 0.786842
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.761
ELB improved by 0.861899
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.879
ELB improved by 0.881842
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.056
ELB improved by 0.823212
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.338
ELB improved by 0.718406
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.74
ELB improved by 0.597093
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.265
ELB improved by 0.475078
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.9
ELB improved by 0.365536
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.621
ELB improved by 0.278964
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.4
ELB improved by 0.220361
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.21
ELB improved by 0.190653
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.018
ELB improved by 0.191507
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.79
ELB improved by 0.227976
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.495
ELB improved by 0.295252
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.149
ELB improved by 0.346367
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.816
ELB improved by 0.332433
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.532
ELB improved by 0.284248
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.28
ELB improved by 0.251905
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.022
ELB improved by 0.258376
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.712
ELB improved by 0.309866
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.334
ELB improved by 0.378218
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.917
ELB improved by 0.416609
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.476
ELB improved by 0.440715
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.052
ELB improved by 0.424617
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.732
ELB improved by 0.319458
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.534
ELB improved by 0.198705
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.417
ELB improved by 0.116147
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.349
ELB improved by 0.0681131
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.308
ELB improved by 0.0415953
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.281
ELB improved by 0.027142
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.261
ELB improved by 0.0191428
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.247
ELB improved by 0.0145443
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.235
ELB improved by 0.0117524
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.225
ELB improved by 0.00994637
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-865.24
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-583.799
ELB improved by 281.442
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-525.265
ELB improved by 58.5338
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-487.096
ELB improved by 38.1686
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.011
ELB improved by 17.0846
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.67
ELB improved by 7.34102
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.532
ELB improved by 5.13877
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.756
ELB improved by 4.77551
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.921
ELB improved by 4.83469
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.895
ELB improved by 5.0263
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.743
ELB improved by 5.15266
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.748
ELB improved by 4.99419
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.271
ELB improved by 4.47739
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.505
ELB improved by 3.76641
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.443
ELB improved by 3.06147
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.869
ELB improved by 2.57372
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.544
ELB improved by 2.3258
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.614
ELB improved by 1.92989
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.205
ELB improved by 1.40855
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.207
ELB improved by 0.997636
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.484
ELB improved by 0.72381
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.939
ELB improved by 0.545129
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.514
ELB improved by 0.424574
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.173
ELB improved by 0.340871
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.891
ELB improved by 0.282445
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.649
ELB improved by 0.241769
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.436
ELB improved by 0.21332
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.242
ELB improved by 0.193214
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.063
ELB improved by 0.178924
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.895
ELB improved by 0.168875
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.732
ELB improved by 0.162089
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.574
ELB improved by 0.157942
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.418
ELB improved by 0.156032
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.262
ELB improved by 0.156096
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.104
ELB improved by 0.157973
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.943
ELB improved by 0.161568
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.776
ELB improved by 0.166844
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.602
ELB improved by 0.173801
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.42
ELB improved by 0.182459
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.227
ELB improved by 0.192845
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.022
ELB improved by 0.204961
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.803
ELB improved by 0.218755
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.569
ELB improved by 0.234084
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.318
ELB improved by 0.250666
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.05
ELB improved by 0.268042
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.765
ELB improved by 0.285538
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.463
ELB improved by 0.302266
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.145
ELB improved by 0.317162
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.816
ELB improved by 0.329079
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.479
ELB improved by 0.33694
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.139
ELB improved by 0.339905
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.802
ELB improved by 0.337531
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.472
ELB improved by 0.329851
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.155
ELB improved by 0.317356
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.854
ELB improved by 0.3009
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.572
ELB improved by 0.28154
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.312
ELB improved by 0.260381
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.073
ELB improved by 0.238435
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.857
ELB improved by 0.216527
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.662
ELB improved by 0.195252
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.487
ELB improved by 0.174999
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.331
ELB improved by 0.156009
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.192
ELB improved by 0.138441
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.07
ELB improved by 0.122402
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.962
ELB improved by 0.107949
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.867
ELB improved by 0.0950761
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.783
ELB improved by 0.0837189
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.709
ELB improved by 0.0737637
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.644
ELB improved by 0.0650714
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.587
ELB improved by 0.0574955
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.536
ELB improved by 0.0508948
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.491
ELB improved by 0.0451403
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.451
ELB improved by 0.0401178
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.415
ELB improved by 0.0357275
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.383
ELB improved by 0.0318836
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.355
ELB improved by 0.028512
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.329
ELB improved by 0.0255493
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.306
ELB improved by 0.0229411
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.285
ELB improved by 0.0206407
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.267
ELB improved by 0.018608
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.25
ELB improved by 0.0168086
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.235
ELB improved by 0.0152128
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.221
ELB improved by 0.0137951
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.208
ELB improved by 0.0125334
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.197
ELB improved by 0.0114086
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.187
ELB improved by 0.0104041
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.177
ELB improved by 0.00950574
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-819.436
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-544.023
ELB improved by 275.412
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-484.819
ELB improved by 59.2045
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.925
ELB improved by 34.8941
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.13
ELB improved by 12.7947
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.144
ELB improved by 4.98626
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.171
ELB improved by 2.97315
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.807
ELB improved by 2.36377
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.606
ELB improved by 2.20066
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.394
ELB improved by 2.21225
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.091
ELB improved by 2.30285
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.645
ELB improved by 2.44604
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.023
ELB improved by 2.62206
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.245
ELB improved by 2.7785
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.429
ELB improved by 2.8158
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.8
ELB improved by 2.62884
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.584
ELB improved by 2.21623
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.862
ELB improved by 1.72167
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.564
ELB improved by 1.29837
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.567
ELB improved by 0.996939
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.771
ELB improved by 0.795358
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.112
ELB improved by 0.659246
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.548
ELB improved by 0.564132
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.053
ELB improved by 0.495234
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.609
ELB improved by 0.443625
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.205
ELB improved by 0.403593
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.834
ELB improved by 0.371249
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.49
ELB improved by 0.343913
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.17
ELB improved by 0.319919
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.872
ELB improved by 0.298481
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.593
ELB improved by 0.279385
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.33
ELB improved by 0.2626
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.082
ELB improved by 0.24803
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.846
ELB improved by 0.235439
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.622
ELB improved by 0.224486
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.407
ELB improved by 0.214768
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.201
ELB improved by 0.205857
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.004
ELB improved by 0.197326
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.815
ELB improved by 0.188786
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.635
ELB improved by 0.179921
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.465
ELB improved by 0.170525
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.304
ELB improved by 0.160536
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.154
ELB improved by 0.150053
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.015
ELB improved by 0.139335
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.886
ELB improved by 0.128767
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.767
ELB improved by 0.118819
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.657
ELB improved by 0.109978
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.555
ELB improved by 0.102692
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.457
ELB improved by 0.097308
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.363
ELB improved by 0.0940165
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.271
ELB improved by 0.0927876
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.177
ELB improved by 0.0933281
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.082
ELB improved by 0.0951157
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.984
ELB improved by 0.0975779
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.884
ELB improved by 0.1004
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.78
ELB improved by 0.103827
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.671
ELB improved by 0.108821
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.554
ELB improved by 0.117087
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.423
ELB improved by 0.131195
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.268
ELB improved by 0.155434
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.07
ELB improved by 0.197603
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.803
ELB improved by 0.26713
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.445
ELB improved by 0.35841
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.995
ELB improved by 0.449218
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.438
ELB improved by 0.557154
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.776
ELB improved by 0.662106
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.147
ELB improved by 0.628889
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.627
ELB improved by 0.519748
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.191
ELB improved by 0.436822
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.752
ELB improved by 0.438915
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.193
ELB improved by 0.558589
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.493
ELB improved by 0.700097
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.901
ELB improved by 0.591846
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.562
ELB improved by 0.338929
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.358
ELB improved by 0.204122
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.204
ELB improved by 0.153682
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.069
ELB improved by 0.135491
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.937
ELB improved by 0.131505
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.801
ELB improved by 0.136644
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.653
ELB improved by 0.147542
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.498
ELB improved by 0.155518
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.348
ELB improved by 0.149612
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.214
ELB improved by 0.13399
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.089
ELB improved by 0.125264
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.959
ELB improved by 0.130112
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.814
ELB improved by 0.145252
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.647
ELB improved by 0.166659
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.457
ELB improved by 0.189792
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.255
ELB improved by 0.201798
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.068
ELB improved by 0.187167
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.915
ELB improved by 0.153494
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.792
ELB improved by 0.122236
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.692
ELB improved by 0.100718
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.606
ELB improved by 0.0854396
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.533
ELB improved by 0.073195
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.47
ELB improved by 0.063231
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.414
ELB improved by 0.0553762
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.366
ELB improved by 0.0488876
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.323
ELB improved by 0.0426824
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.287
ELB improved by 0.0360368
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.258
ELB improved by 0.0290019
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.236
ELB improved by 0.0222312
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.219
ELB improved by 0.0164344
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.207
ELB improved by 0.0119657
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.198
ELB improved by 0.0087842
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-854.718
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-572.764
ELB improved by 281.953
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-511.826
ELB improved by 60.9389
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-469.593
ELB improved by 42.2323
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.299
ELB improved by 20.2947
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.852
ELB improved by 8.44637
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.473
ELB improved by 4.37947
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.356
ELB improved by 3.1163
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.663
ELB improved by 2.69385
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.118
ELB improved by 2.54434
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.635
ELB improved by 2.48323
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.211
ELB improved by 2.42422
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.895
ELB improved by 2.31574
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.77
ELB improved by 2.12504
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.927
ELB improved by 1.84334
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.427
ELB improved by 1.49946
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.272
ELB improved by 1.1553
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.402
ELB improved by 0.86944
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.737
ELB improved by 0.665557
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.201
ELB improved by 0.535504
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.742
ELB improved by 0.459282
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.323
ELB improved by 0.418776
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.922
ELB improved by 0.401699
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.521
ELB improved by 0.400911
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.108
ELB improved by 0.412809
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.672
ELB improved by 0.436053
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.201
ELB improved by 0.470719
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.683
ELB improved by 0.517736
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.105
ELB improved by 0.578474
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.451
ELB improved by 0.654374
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.704
ELB improved by 0.746511
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.849
ELB improved by 0.854821
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.872
ELB improved by 0.976821
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.766
ELB improved by 1.10636
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.532
ELB improved by 1.23405
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.181
ELB improved by 1.35081
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.733
ELB improved by 1.44794
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.245
ELB improved by 1.48814
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.864
ELB improved by 1.38126
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.75
ELB improved by 1.11404
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.954
ELB improved by 0.796177
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.423
ELB improved by 0.530967
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.07
ELB improved by 0.352548
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.823
ELB improved by 0.246835
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.63
ELB improved by 0.193586
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.447
ELB improved by 0.182395
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.236
ELB improved by 0.211176
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.966
ELB improved by 0.269746
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.645
ELB improved by 0.32114
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.312
ELB improved by 0.333529
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.007
ELB improved by 0.30483
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.768
ELB improved by 0.23889
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.601
ELB improved by 0.167222
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.481
ELB improved by 0.119508
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.386
ELB improved by 0.0949376
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.304
ELB improved by 0.0828321
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.228
ELB improved by 0.0757736
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.158
ELB improved by 0.0700873
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.093
ELB improved by 0.0644112
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.034
ELB improved by 0.0587418
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.981
ELB improved by 0.0535995
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.932
ELB improved by 0.0493773
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.885
ELB improved by 0.0461342
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.842
ELB improved by 0.0437123
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.8
ELB improved by 0.0419043
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.759
ELB improved by 0.0405424
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.72
ELB improved by 0.0395174
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.681
ELB improved by 0.0387668
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.643
ELB improved by 0.0382569
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.605
ELB improved by 0.0379697
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.567
ELB improved by 0.037894
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.529
ELB improved by 0.0380211
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.49
ELB improved by 0.0383421
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.452
ELB improved by 0.0388473
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.412
ELB improved by 0.0395256
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.372
ELB improved by 0.0403648
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.33
ELB improved by 0.041352
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.288
ELB improved by 0.0424735
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.244
ELB improved by 0.0437152
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.199
ELB improved by 0.0450637
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.153
ELB improved by 0.0465062
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.105
ELB improved by 0.0480326
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.055
ELB improved by 0.0496368
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.004
ELB improved by 0.0513201
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.951
ELB improved by 0.0530972
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.896
ELB improved by 0.0550054
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.838
ELB improved by 0.0571232
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.779
ELB improved by 0.0596041
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.716
ELB improved by 0.0627451
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.649
ELB improved by 0.0671284
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.575
ELB improved by 0.0739279
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.489
ELB improved by 0.0855762
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.382
ELB improved by 0.107129
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.234
ELB improved by 0.148353
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.011
ELB improved by 0.22295
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.685
ELB improved by 0.326165
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.309
ELB improved by 0.375386
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.017
ELB improved by 0.291933
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.832
ELB improved by 0.185604
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.7
ELB improved by 0.131889
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.591
ELB improved by 0.109442
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.491
ELB improved by 0.0997056
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.395
ELB improved by 0.0956049
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.301
ELB improved by 0.0944448
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.206
ELB improved by 0.0951403
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.108
ELB improved by 0.0972474
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.008
ELB improved by 0.100476
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.904
ELB improved by 0.104148
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.797
ELB improved by 0.106623
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.692
ELB improved by 0.105434
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.593
ELB improved by 0.0989106
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.505
ELB improved by 0.0879175
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.43
ELB improved by 0.075131
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.367
ELB improved by 0.0628252
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.315
ELB improved by 0.0520199
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.272
ELB improved by 0.0429591
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.236
ELB improved by 0.0355693
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.207
ELB improved by 0.0295996
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.182
ELB improved by 0.024711
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.161
ELB improved by 0.0206031
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.144
ELB improved by 0.017095
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.13
ELB improved by 0.0141117
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.119
ELB improved by 0.0116197
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.109
ELB improved by 0.00957851
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.861 0.182 3.036
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.048 | 0.004 | 0.053 | |
| getPIPs | 0.046 | 0.000 | 0.046 | |
| graper | 0.073 | 0.000 | 0.073 | |
| makeExampleData | 0.008 | 0.000 | 0.008 | |
| makeExampleDataWithUnequalGroups | 0.01 | 0.00 | 0.01 | |
| plotELBO | 0.405 | 0.020 | 0.425 | |
| plotGroupPenalties | 1.536 | 0.032 | 1.571 | |
| plotPosterior | 0.964 | 0.004 | 0.970 | |
| predict.graper | 1.031 | 0.016 | 1.048 | |
| print.graper | 0.073 | 0.000 | 0.073 | |