Britta Velten
| Snapshot Date: 2026-05-05 13:45 -0400 (Tue, 05 May 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: ba611e2 |
| git_last_commit_date: 2026-04-28 08:49:19 -0400 (Tue, 28 Apr 2026) |
| Back to Multiple platform build/check report for BioC 3.24: simplified long |
|
This page was generated on 2026-05-06 11:33 -0400 (Wed, 06 May 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.4 LTS) | x86_64 | 4.6.0 RC (2026-04-17 r89917) -- "Because it was There" | 4878 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4663 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 923/2366 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.29.0 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
| See other builds for graper in R Universe. | ||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.29.0 |
| Command: /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.24-bioc/R/site-library --timings graper_1.29.0.tar.gz |
| StartedAt: 2026-05-06 00:23:43 -0400 (Wed, 06 May 2026) |
| EndedAt: 2026-05-06 00:25:15 -0400 (Wed, 06 May 2026) |
| EllapsedTime: 92.2 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.24-bioc/R/site-library --timings graper_1.29.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.24-bioc/meat/graper.Rcheck’
* using R version 4.6.0 RC (2026-04-17 r89917)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
* running under: Ubuntu 24.04.4 LTS
* using session charset: UTF-8
* current time: 2026-05-06 04:23:44 UTC
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.29.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’
* checking installed package size ... INFO
installed size is 6.2Mb
sub-directories of 1Mb or more:
libs 6.0Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/home/biocbuild/bbs-3.24-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.24-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.29.0’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’ g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.24-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.24-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++20 -shared -L/home/biocbuild/bbs-3.24-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.24-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.24-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.24-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.6.0 RC (2026-04-17 r89917) -- "Because it was There"
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-879.961
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-573.155
ELB improved by 306.805
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-513.43
ELB improved by 59.7255
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-472.67
ELB improved by 40.7595
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.42
ELB improved by 18.2502
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.11
ELB improved by 7.31059
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.922
ELB improved by 4.18772
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.749
ELB improved by 3.17279
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.998
ELB improved by 2.75117
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.44
ELB improved by 2.55763
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.99
ELB improved by 2.44996
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.628
ELB improved by 2.3627
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.367
ELB improved by 2.26084
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.247
ELB improved by 2.11986
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.322
ELB improved by 1.92533
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.643
ELB improved by 1.6789
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.244
ELB improved by 1.39902
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.127
ELB improved by 1.11714
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.259
ELB improved by 0.867335
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.591
ELB improved by 0.668501
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.071
ELB improved by 0.519282
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.663
ELB improved by 0.40884
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.336
ELB improved by 0.32679
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.07
ELB improved by 0.265853
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.849
ELB improved by 0.22089
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.661
ELB improved by 0.187861
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.498
ELB improved by 0.163493
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.352
ELB improved by 0.145236
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.221
ELB improved by 0.13122
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.101
ELB improved by 0.120147
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.99
ELB improved by 0.111163
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.886
ELB improved by 0.103725
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.789
ELB improved by 0.0974947
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.696
ELB improved by 0.0922606
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.609
ELB improved by 0.0878875
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.524
ELB improved by 0.0842856
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.443
ELB improved by 0.0813943
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.364
ELB improved by 0.0791728
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.286
ELB improved by 0.0775959
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.21
ELB improved by 0.076651
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.133
ELB improved by 0.0763366
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.057
ELB improved by 0.0766619
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.979
ELB improved by 0.0776461
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.9
ELB improved by 0.0793181
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.818
ELB improved by 0.0817161
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.733
ELB improved by 0.0848871
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.644
ELB improved by 0.0888855
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.55
ELB improved by 0.0937717
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.451
ELB improved by 0.099608
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.344
ELB improved by 0.106454
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.23
ELB improved by 0.11436
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.107
ELB improved by 0.123352
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.973
ELB improved by 0.133419
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.829
ELB improved by 0.144492
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.672
ELB improved by 0.156414
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.503
ELB improved by 0.168913
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.322
ELB improved by 0.181581
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.128
ELB improved by 0.193878
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.923
ELB improved by 0.205172
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.708
ELB improved by 0.214845
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.485
ELB improved by 0.222411
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.258
ELB improved by 0.227638
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.027
ELB improved by 0.230592
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.796
ELB improved by 0.231596
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.564
ELB improved by 0.231119
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.335
ELB improved by 0.229635
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.107
ELB improved by 0.227507
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.882
ELB improved by 0.224924
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.66
ELB improved by 0.221878
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.442
ELB improved by 0.218182
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.229
ELB improved by 0.213508
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.021
ELB improved by 0.207434
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.822
ELB improved by 0.199533
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.632
ELB improved by 0.189483
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.455
ELB improved by 0.177193
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.292
ELB improved by 0.162895
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.145
ELB improved by 0.147145
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.014
ELB improved by 0.130733
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.9
ELB improved by 0.114514
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.801
ELB improved by 0.0992399
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.715
ELB improved by 0.0854295
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.642
ELB improved by 0.073329
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.579
ELB improved by 0.0629451
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.525
ELB improved by 0.0541221
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.478
ELB improved by 0.0466271
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.438
ELB improved by 0.0402185
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.403
ELB improved by 0.0346877
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.373
ELB improved by 0.0298773
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.348
ELB improved by 0.0256784
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.326
ELB improved by 0.022019
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.307
ELB improved by 0.0188482
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.291
ELB improved by 0.0161244
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.277
ELB improved by 0.0138071
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.265
ELB improved by 0.0118542
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.255
ELB improved by 0.0102223
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.246
ELB improved by 0.00886774
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-891.173
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-588.414
ELB improved by 302.759
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-526.187
ELB improved by 62.2273
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-489.007
ELB improved by 37.1802
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.336
ELB improved by 17.6709
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.882
ELB improved by 9.45446
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.226
ELB improved by 6.65506
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.242
ELB improved by 5.98446
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.312
ELB improved by 5.93042
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.558
ELB improved by 5.75363
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.413
ELB improved by 5.14516
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.21
ELB improved by 4.20235
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.964
ELB improved by 3.24671
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.482
ELB improved by 2.48213
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.548
ELB improved by 1.93404
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.954
ELB improved by 1.59344
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.486
ELB improved by 1.46847
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.03
ELB improved by 1.45574
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.748
ELB improved by 1.28221
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.769
ELB improved by 0.979008
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.014
ELB improved by 0.755062
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.396
ELB improved by 0.618012
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.874
ELB improved by 0.521311
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.431
ELB improved by 0.443083
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.056
ELB improved by 0.375001
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.745
ELB improved by 0.311646
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.49
ELB improved by 0.25479
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.281
ELB improved by 0.209184
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.105
ELB improved by 0.175233
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.955
ELB improved by 0.149943
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.825
ELB improved by 0.130178
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.711
ELB improved by 0.113883
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.611
ELB improved by 0.0999993
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.523
ELB improved by 0.0880688
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.445
ELB improved by 0.0778863
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.376
ELB improved by 0.0692947
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.314
ELB improved by 0.0621101
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.258
ELB improved by 0.0561245
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.207
ELB improved by 0.0511323
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.16
ELB improved by 0.046951
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.116
ELB improved by 0.0434278
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.076
ELB improved by 0.0404379
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.038
ELB improved by 0.0378772
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.002
ELB improved by 0.0356552
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.969
ELB improved by 0.0336901
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.937
ELB improved by 0.0319062
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.907
ELB improved by 0.0302351
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.878
ELB improved by 0.0286193
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.851
ELB improved by 0.0270184
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.826
ELB improved by 0.0254129
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.802
ELB improved by 0.023805
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.78
ELB improved by 0.0222148
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.759
ELB improved by 0.0206726
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.74
ELB improved by 0.0192109
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.722
ELB improved by 0.0178574
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.705
ELB improved by 0.0166309
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.69
ELB improved by 0.01554
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.675
ELB improved by 0.0145849
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.661
ELB improved by 0.0137585
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.648
ELB improved by 0.0130499
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.636
ELB improved by 0.0124457
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.624
ELB improved by 0.0119323
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.612
ELB improved by 0.0114966
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.601
ELB improved by 0.0111266
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.59
ELB improved by 0.0108119
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.58
ELB improved by 0.0105436
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.57
ELB improved by 0.0103143
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.559
ELB improved by 0.0101177
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.549
ELB improved by 0.00994878
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-870.46
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-588.265
ELB improved by 282.195
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-522.424
ELB improved by 65.8406
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-480.259
ELB improved by 42.1649
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.923
ELB improved by 21.3362
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.511
ELB improved by 10.4121
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.878
ELB improved by 6.63298
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.115
ELB improved by 5.76351
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.473
ELB improved by 5.64204
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.094
ELB improved by 5.3785
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.487
ELB improved by 4.60747
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.979
ELB improved by 3.50736
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.468
ELB improved by 2.51166
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.607
ELB improved by 1.86067
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.078
ELB improved by 1.52853
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.71
ELB improved by 1.36848
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.438
ELB improved by 1.27213
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.195
ELB improved by 1.24333
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.01
ELB improved by 1.18435
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.014
ELB improved by 0.996353
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.182
ELB improved by 0.832138
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.433
ELB improved by 0.74875
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.733
ELB improved by 0.699828
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.072
ELB improved by 0.660759
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.448
ELB improved by 0.624742
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.857
ELB improved by 0.590369
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.3
ELB improved by 0.55736
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.774
ELB improved by 0.525526
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.28
ELB improved by 0.494651
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.815
ELB improved by 0.464542
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.38
ELB improved by 0.435086
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.974
ELB improved by 0.406262
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.596
ELB improved by 0.378136
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.245
ELB improved by 0.350849
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.92
ELB improved by 0.324599
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.621
ELB improved by 0.29961
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.345
ELB improved by 0.276096
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.09
ELB improved by 0.254277
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.856
ELB improved by 0.234493
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.638
ELB improved by 0.217492
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.433
ELB improved by 0.20497
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.233
ELB improved by 0.200513
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.022
ELB improved by 0.210556
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.781
ELB improved by 0.241196
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.501
ELB improved by 0.280102
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.216
ELB improved by 0.285026
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.975
ELB improved by 0.241323
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.791
ELB improved by 0.183966
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.653
ELB improved by 0.137621
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.548
ELB improved by 0.105089
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.465
ELB improved by 0.0827049
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.398
ELB improved by 0.0669421
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.343
ELB improved by 0.0554953
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.296
ELB improved by 0.0469796
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.255
ELB improved by 0.0405332
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.22
ELB improved by 0.0355762
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.188
ELB improved by 0.0316907
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.159
ELB improved by 0.028563
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.133
ELB improved by 0.0259549
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.11
ELB improved by 0.0236901
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.088
ELB improved by 0.0216477
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.068
ELB improved by 0.019755
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.05
ELB improved by 0.0179788
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.034
ELB improved by 0.016313
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.019
ELB improved by 0.014766
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.006
ELB improved by 0.0133493
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.994
ELB improved by 0.0120708
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.983
ELB improved by 0.0109318
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.973
ELB improved by 0.00992729
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-868.305
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-582.317
ELB improved by 285.989
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-528.995
ELB improved by 53.3218
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-494.972
ELB improved by 34.0235
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-476.52
ELB improved by 18.4512
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.724
ELB improved by 8.79622
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.296
ELB improved by 4.42809
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.215
ELB improved by 3.08065
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.597
ELB improved by 2.61823
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.215
ELB improved by 2.38187
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.008
ELB improved by 2.2077
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.971
ELB improved by 2.03697
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.129
ELB improved by 1.84109
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.519
ELB improved by 1.61084
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.163
ELB improved by 1.35534
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.066
ELB improved by 1.09691
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.206
ELB improved by 0.860368
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.543
ELB improved by 0.662653
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.035
ELB improved by 0.508801
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.64
ELB improved by 0.394833
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.327
ELB improved by 0.312864
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.072
ELB improved by 0.254689
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.859
ELB improved by 0.21336
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.675
ELB improved by 0.183584
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.514
ELB improved by 0.161612
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.369
ELB improved by 0.144931
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.237
ELB improved by 0.131919
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.115
ELB improved by 0.121549
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.002
ELB improved by 0.113173
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.896
ELB improved by 0.106374
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.795
ELB improved by 0.100877
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.698
ELB improved by 0.096497
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.605
ELB improved by 0.0931059
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.515
ELB improved by 0.0906148
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.426
ELB improved by 0.0889638
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.337
ELB improved by 0.0881151
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.249
ELB improved by 0.0880486
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.161
ELB improved by 0.0887594
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.07
ELB improved by 0.0902556
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.978
ELB improved by 0.0925554
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.882
ELB improved by 0.0956858
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.783
ELB improved by 0.0996787
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.678
ELB improved by 0.104568
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.568
ELB improved by 0.110385
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.45
ELB improved by 0.11715
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.326
ELB improved by 0.124872
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.192
ELB improved by 0.133535
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.049
ELB improved by 0.143096
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.895
ELB improved by 0.153483
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.731
ELB improved by 0.164594
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.555
ELB improved by 0.176306
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.366
ELB improved by 0.188488
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.165
ELB improved by 0.201013
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.951
ELB improved by 0.213773
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.725
ELB improved by 0.226673
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.485
ELB improved by 0.239621
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.232
ELB improved by 0.252484
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.967
ELB improved by 0.265046
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.69
ELB improved by 0.276967
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.403
ELB improved by 0.287767
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.106
ELB improved by 0.296851
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.802
ELB improved by 0.303563
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.495
ELB improved by 0.307248
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.188
ELB improved by 0.307305
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.884
ELB improved by 0.303314
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.589
ELB improved by 0.295342
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.304
ELB improved by 0.284567
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.03
ELB improved by 0.274143
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.76
ELB improved by 0.270189
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.478
ELB improved by 0.282493
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.157
ELB improved by 0.321076
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.779
ELB improved by 0.378046
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.365
ELB improved by 0.413876
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.954
ELB improved by 0.410962
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.548
ELB improved by 0.406134
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.115
ELB improved by 0.432147
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.637
ELB improved by 0.478495
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.144
ELB improved by 0.492723
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.716
ELB improved by 0.428563
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.4
ELB improved by 0.315458
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.182
ELB improved by 0.217848
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.028
ELB improved by 0.154019
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.913
ELB improved by 0.114929
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.822
ELB improved by 0.090939
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.746
ELB improved by 0.0759695
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.68
ELB improved by 0.0664345
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.62
ELB improved by 0.0601891
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.564
ELB improved by 0.0559016
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.511
ELB improved by 0.0527292
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.461
ELB improved by 0.050192
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.413
ELB improved by 0.0481616
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.366
ELB improved by 0.0468902
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.319
ELB improved by 0.0470408
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.269
ELB improved by 0.0497175
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.213
ELB improved by 0.056467
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.144
ELB improved by 0.0689266
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.057
ELB improved by 0.087078
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.952
ELB improved by 0.105246
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.84
ELB improved by 0.111072
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.743
ELB improved by 0.0975902
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.67
ELB improved by 0.0733187
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.619
ELB improved by 0.050199
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.586
ELB improved by 0.0333451
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.563
ELB improved by 0.0227742
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.546
ELB improved by 0.0167139
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.533
ELB improved by 0.0134167
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.521
ELB improved by 0.0117064
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.51
ELB improved by 0.0109114
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.5
ELB improved by 0.0106728
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.489
ELB improved by 0.0107956
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.478
ELB improved by 0.0111556
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.466
ELB improved by 0.0116434
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.454
ELB improved by 0.0121335
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.442
ELB improved by 0.0124759
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.429
ELB improved by 0.0125178
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.417
ELB improved by 0.0121506
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.406
ELB improved by 0.0113602
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.395
ELB improved by 0.0102424
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.386
ELB improved by 0.00896431
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.386 0.202 2.576
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.055 | 0.005 | 0.060 | |
| getPIPs | 0.077 | 0.020 | 0.096 | |
| graper | 0.084 | 0.002 | 0.087 | |
| makeExampleData | 0.009 | 0.000 | 0.010 | |
| makeExampleDataWithUnequalGroups | 0.012 | 0.000 | 0.012 | |
| plotELBO | 0.351 | 0.011 | 0.362 | |
| plotGroupPenalties | 0.943 | 0.006 | 0.949 | |
| plotPosterior | 0.670 | 0.001 | 0.670 | |
| predict.graper | 2.069 | 0.014 | 2.083 | |
| print.graper | 0.050 | 0.002 | 0.053 | |