Britta Velten
| Snapshot Date: 2025-10-17 13:45 -0400 (Fri, 17 Oct 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 82b0592 |
| git_last_commit_date: 2025-06-24 03:15:40 -0400 (Tue, 24 Jun 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-10-18 12:03 -0400 (Sat, 18 Oct 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" | 4887 |
| lconway | macOS 12.7.6 Monterey | x86_64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4677 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4622 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4632 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 918/2353 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.25.2 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| lconway | macOS 12.7.6 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.25.2 |
| Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.25.2.tar.gz |
| StartedAt: 2025-10-18 00:29:02 -0400 (Sat, 18 Oct 2025) |
| EndedAt: 2025-10-18 00:30:31 -0400 (Sat, 18 Oct 2025) |
| EllapsedTime: 89.0 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.25.2.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.1 Patched (2025-08-23 r88802)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.25.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking installed package size ... INFO
installed size is 6.0Mb
sub-directories of 1Mb or more:
libs 5.8Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.22-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.25.2’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.22-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.22-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.22-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.22-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-859.525
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-572.067
ELB improved by 287.458
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-511.001
ELB improved by 61.0662
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-473.797
ELB improved by 37.2041
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.412
ELB improved by 15.3849
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.081
ELB improved by 6.33083
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.23
ELB improved by 3.85188
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.021
ELB improved by 3.20859
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.932
ELB improved by 3.08893
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.8
ELB improved by 3.13224
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.596
ELB improved by 3.20344
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.427
ELB improved by 3.1694
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.543
ELB improved by 2.88447
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.217
ELB improved by 2.32521
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.551
ELB improved by 1.66609
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.431
ELB improved by 1.11999
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.669
ELB improved by 0.762121
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.116
ELB improved by 0.552803
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.684
ELB improved by 0.432411
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.323
ELB improved by 0.360569
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.008
ELB improved by 0.315041
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.724
ELB improved by 0.28378
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.464
ELB improved by 0.260066
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.224
ELB improved by 0.240592
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.999
ELB improved by 0.224516
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.787
ELB improved by 0.212164
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.583
ELB improved by 0.203804
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.384
ELB improved by 0.199238
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.186
ELB improved by 0.198011
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.986
ELB improved by 0.199674
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.783
ELB improved by 0.203896
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.572
ELB improved by 0.210464
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.353
ELB improved by 0.219261
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.123
ELB improved by 0.230245
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.879
ELB improved by 0.24345
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.62
ELB improved by 0.258997
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.343
ELB improved by 0.277125
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.045
ELB improved by 0.298235
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.722
ELB improved by 0.322921
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.37
ELB improved by 0.351986
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.983
ELB improved by 0.38641
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.556
ELB improved by 0.427217
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.081
ELB improved by 0.475211
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.551
ELB improved by 0.530496
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.959
ELB improved by 0.591718
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.304
ELB improved by 0.655064
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.59
ELB improved by 0.713339
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.834
ELB improved by 0.756064
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.062
ELB improved by 0.771957
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.308
ELB improved by 0.754269
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.601
ELB improved by 0.707133
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.952
ELB improved by 0.649127
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.342
ELB improved by 0.609446
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.736
ELB improved by 0.606064
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.137
ELB improved by 0.599521
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.621
ELB improved by 0.516252
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.242
ELB improved by 0.378359
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.982
ELB improved by 0.259722
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.802
ELB improved by 0.180103
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.673
ELB improved by 0.129444
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.576
ELB improved by 0.0973579
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.498
ELB improved by 0.0772202
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.433
ELB improved by 0.065174
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.374
ELB improved by 0.0590752
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.316
ELB improved by 0.0577553
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.256
ELB improved by 0.0603956
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.19
ELB improved by 0.0657865
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.119
ELB improved by 0.0715354
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.045
ELB improved by 0.07402
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.974
ELB improved by 0.0702154
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.914
ELB improved by 0.0604048
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.866
ELB improved by 0.0481324
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.829
ELB improved by 0.0369985
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.8
ELB improved by 0.0284944
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.778
ELB improved by 0.0224592
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.76
ELB improved by 0.0182269
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.744
ELB improved by 0.0152101
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.731
ELB improved by 0.0130082
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.72
ELB improved by 0.0113625
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.71
ELB improved by 0.0101029
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.701
ELB improved by 0.00911469
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-879.647
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-577.284
ELB improved by 302.363
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-519.04
ELB improved by 58.2444
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-486.399
ELB improved by 32.6407
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-472.56
ELB improved by 13.8384
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.823
ELB improved by 6.73713
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.957
ELB improved by 4.86629
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.284
ELB improved by 4.67275
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.462
ELB improved by 4.82266
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.55
ELB improved by 4.91125
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.855
ELB improved by 4.69507
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.783
ELB improved by 4.07193
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.596
ELB improved by 3.1873
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.284
ELB improved by 2.31216
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.666
ELB improved by 1.61777
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.537
ELB improved by 1.12967
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.731
ELB improved by 0.805989
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.135
ELB improved by 0.59544
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.678
ELB improved by 0.457058
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.315
ELB improved by 0.363205
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.018
ELB improved by 0.296894
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.77
ELB improved by 0.248112
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.559
ELB improved by 0.21096
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.377
ELB improved by 0.181871
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.218
ELB improved by 0.158596
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.079
ELB improved by 0.139654
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.955
ELB improved by 0.124023
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.844
ELB improved by 0.110976
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.744
ELB improved by 0.0999802
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.653
ELB improved by 0.0906337
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.571
ELB improved by 0.0826291
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.495
ELB improved by 0.0757271
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.425
ELB improved by 0.0697389
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.361
ELB improved by 0.0645137
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.301
ELB improved by 0.0599301
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.245
ELB improved by 0.0558891
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.192
ELB improved by 0.0523096
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.143
ELB improved by 0.0491245
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.097
ELB improved by 0.046278
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.053
ELB improved by 0.0437233
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.012
ELB improved by 0.0414214
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.973
ELB improved by 0.0393391
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.935
ELB improved by 0.0374483
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.899
ELB improved by 0.0357255
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.865
ELB improved by 0.0341505
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.832
ELB improved by 0.0327063
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.801
ELB improved by 0.0313788
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.771
ELB improved by 0.030156
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.742
ELB improved by 0.0290283
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.714
ELB improved by 0.0279879
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.687
ELB improved by 0.0270288
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.661
ELB improved by 0.026147
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.635
ELB improved by 0.0253401
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.611
ELB improved by 0.0246077
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.587
ELB improved by 0.0239513
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.563
ELB improved by 0.0233748
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.541
ELB improved by 0.0228848
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.518
ELB improved by 0.0224907
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.496
ELB improved by 0.0222051
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.474
ELB improved by 0.0220442
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.452
ELB improved by 0.0220267
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.43
ELB improved by 0.0221723
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.407
ELB improved by 0.0224972
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.384
ELB improved by 0.0230064
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.36
ELB improved by 0.0236824
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.336
ELB improved by 0.0244711
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.311
ELB improved by 0.0252725
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.285
ELB improved by 0.0259463
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.258
ELB improved by 0.026343
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.232
ELB improved by 0.026356
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.206
ELB improved by 0.0259685
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.181
ELB improved by 0.0252638
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.156
ELB improved by 0.0243869
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.133
ELB improved by 0.0234862
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.11
ELB improved by 0.0226701
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.088
ELB improved by 0.0219948
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.067
ELB improved by 0.021476
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.046
ELB improved by 0.0211074
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.025
ELB improved by 0.0208769
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.004
ELB improved by 0.0207755
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.983
ELB improved by 0.0208021
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.962
ELB improved by 0.0209652
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.941
ELB improved by 0.0212838
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.919
ELB improved by 0.0217886
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.897
ELB improved by 0.0225247
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.873
ELB improved by 0.0235556
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.848
ELB improved by 0.0249679
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.821
ELB improved by 0.0268789
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.792
ELB improved by 0.0294423
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.759
ELB improved by 0.0328504
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.722
ELB improved by 0.0373219
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.679
ELB improved by 0.043059
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.628
ELB improved by 0.0501562
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.57
ELB improved by 0.0584631
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.503
ELB improved by 0.0674699
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.426
ELB improved by 0.0763536
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.342
ELB improved by 0.0842678
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.251
ELB improved by 0.0907084
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.156
ELB improved by 0.0956457
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.056
ELB improved by 0.0993552
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.954
ELB improved by 0.102177
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.85
ELB improved by 0.104394
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.743
ELB improved by 0.10622
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.636
ELB improved by 0.107825
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.526
ELB improved by 0.109363
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.415
ELB improved by 0.110975
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.302
ELB improved by 0.112792
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.188
ELB improved by 0.114936
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.07
ELB improved by 0.117519
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.949
ELB improved by 0.120642
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.825
ELB improved by 0.124399
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.696
ELB improved by 0.128881
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.562
ELB improved by 0.134171
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.422
ELB improved by 0.140348
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.274
ELB improved by 0.147476
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.119
ELB improved by 0.155585
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.954
ELB improved by 0.164638
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.779
ELB improved by 0.174484
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.595
ELB improved by 0.1848
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.4
ELB improved by 0.195052
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.195
ELB improved by 0.204493
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.983
ELB improved by 0.212238
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.765
ELB improved by 0.217393
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.546
ELB improved by 0.219197
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.329
ELB improved by 0.217124
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.118
ELB improved by 0.210956
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.917
ELB improved by 0.200859
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.73
ELB improved by 0.187415
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.558
ELB improved by 0.171549
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.404
ELB improved by 0.154368
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.267
ELB improved by 0.137052
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.146
ELB improved by 0.120846
iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.039
ELB improved by 0.107101
iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.942
ELB improved by 0.0973059
iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.848
ELB improved by 0.0931464
iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.752
ELB improved by 0.0964629
iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.644
ELB improved by 0.10839
iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.517
ELB improved by 0.126169
iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.379
ELB improved by 0.13874
iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.247
ELB improved by 0.131928
iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.14
ELB improved by 0.106343
iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.063
ELB improved by 0.0773758
iteration 143
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.008
ELB improved by 0.055196
iteration 144
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.968
ELB improved by 0.0401685
iteration 145
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.938
ELB improved by 0.0298977
iteration 146
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.915
ELB improved by 0.0226248
iteration 147
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.898
ELB improved by 0.0173599
iteration 148
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.884
ELB improved by 0.0135147
iteration 149
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.874
ELB improved by 0.0106971
iteration 150
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.865
ELB improved by 0.00862801
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-843.267
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-557.311
ELB improved by 285.956
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-499.418
ELB improved by 57.893
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.276
ELB improved by 33.1418
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.088
ELB improved by 14.1888
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.422
ELB improved by 7.66523
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.467
ELB improved by 5.95545
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.469
ELB improved by 5.99764
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.897
ELB improved by 6.57231
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.891
ELB improved by 7.00596
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.243
ELB improved by 6.64773
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.861
ELB improved by 5.38199
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.999
ELB improved by 3.862
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.323
ELB improved by 2.67619
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.399
ELB improved by 1.92449
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.917
ELB improved by 1.48183
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.716
ELB improved by 1.20119
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.741
ELB improved by 0.97496
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.97
ELB improved by 0.770713
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.36
ELB improved by 0.610138
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.858
ELB improved by 0.501891
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.427
ELB improved by 0.43045
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.048
ELB improved by 0.379443
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.707
ELB improved by 0.340921
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.394
ELB improved by 0.313293
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.097
ELB improved by 0.296547
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.807
ELB improved by 0.289836
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.516
ELB improved by 0.291779
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.214
ELB improved by 0.301208
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.897
ELB improved by 0.317399
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.557
ELB improved by 0.340005
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.188
ELB improved by 0.36896
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.784
ELB improved by 0.404421
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.337
ELB improved by 0.446734
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.841
ELB improved by 0.496341
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.287
ELB improved by 0.553531
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.669
ELB improved by 0.617954
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.981
ELB improved by 0.687874
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.222
ELB improved by 0.759278
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.397
ELB improved by 0.825216
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.521
ELB improved by 0.876021
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.619
ELB improved by 0.901286
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.725
ELB improved by 0.894287
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.867
ELB improved by 0.858386
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.054
ELB improved by 0.812761
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.263
ELB improved by 0.791011
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.463
ELB improved by 0.79958
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.75
ELB improved by 0.713685
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.261
ELB improved by 0.488412
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.947
ELB improved by 0.31439
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.729
ELB improved by 0.217993
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.57
ELB improved by 0.158967
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.45
ELB improved by 0.119588
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.358
ELB improved by 0.0921925
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.286
ELB improved by 0.0725923
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.227
ELB improved by 0.0582515
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.18
ELB improved by 0.0475611
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.14
ELB improved by 0.0394653
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.107
ELB improved by 0.033251
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.079
ELB improved by 0.0284253
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.054
ELB improved by 0.0246403
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.032
ELB improved by 0.0216464
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.013
ELB improved by 0.0192612
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.996
ELB improved by 0.0173494
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.98
ELB improved by 0.0158081
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.965
ELB improved by 0.0145568
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.952
ELB improved by 0.0135299
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.939
ELB improved by 0.0126713
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.927
ELB improved by 0.0119309
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.916
ELB improved by 0.0112626
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.905
ELB improved by 0.0106248
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.895
ELB improved by 0.00998275
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-854.37
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-587.732
ELB improved by 266.638
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-529.223
ELB improved by 58.5094
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-483.67
ELB improved by 45.5532
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.88
ELB improved by 22.7894
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.431
ELB improved by 10.4491
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.271
ELB improved by 6.15972
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.147
ELB improved by 5.12443
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.193
ELB improved by 4.95409
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.318
ELB improved by 4.8743
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.819
ELB improved by 4.49968
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.131
ELB improved by 3.68774
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.485
ELB improved by 2.64578
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.76
ELB improved by 1.72491
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.665
ELB improved by 1.09583
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.943
ELB improved by 0.721478
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.435
ELB improved by 0.508225
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.05
ELB improved by 0.384906
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.74
ELB improved by 0.309807
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.479
ELB improved by 0.260833
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.253
ELB improved by 0.226702
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.051
ELB improved by 0.201548
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.869
ELB improved by 0.182144
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.702
ELB improved by 0.166595
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.549
ELB improved by 0.153721
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.406
ELB improved by 0.142754
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.273
ELB improved by 0.133182
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.148
ELB improved by 0.124652
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.031
ELB improved by 0.116927
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.921
ELB improved by 0.109841
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.818
ELB improved by 0.103286
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.721
ELB improved by 0.0971899
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.629
ELB improved by 0.0915059
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.543
ELB improved by 0.0862056
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.462
ELB improved by 0.0812709
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.385
ELB improved by 0.0766894
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.313
ELB improved by 0.0724513
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.244
ELB improved by 0.0685469
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.179
ELB improved by 0.0649657
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.117
ELB improved by 0.0616958
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.059
ELB improved by 0.0587244
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.003
ELB improved by 0.056038
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.949
ELB improved by 0.0536233
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.898
ELB improved by 0.0514685
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.848
ELB improved by 0.0495637
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.8
ELB improved by 0.0479022
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.754
ELB improved by 0.0464816
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.708
ELB improved by 0.0453045
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.664
ELB improved by 0.0443801
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.62
ELB improved by 0.0437253
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.577
ELB improved by 0.0433671
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.533
ELB improved by 0.0433454
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.49
ELB improved by 0.0437169
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.445
ELB improved by 0.0445622
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.399
ELB improved by 0.0459965
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.351
ELB improved by 0.0481871
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.3
ELB improved by 0.0513834
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.244
ELB improved by 0.0559645
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.181
ELB improved by 0.0625138
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.109
ELB improved by 0.0719234
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.024
ELB improved by 0.0855066
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.919
ELB improved by 0.105013
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.786
ELB improved by 0.132218
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.619
ELB improved by 0.16735
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.413
ELB improved by 0.205834
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.177
ELB improved by 0.236442
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.928
ELB improved by 0.248718
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.684
ELB improved by 0.244483
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.449
ELB improved by 0.234158
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.224
ELB improved by 0.225356
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.004
ELB improved by 0.219721
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.79
ELB improved by 0.214365
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.586
ELB improved by 0.204412
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.398
ELB improved by 0.187489
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.232
ELB improved by 0.166216
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.087
ELB improved by 0.145061
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.96
ELB improved by 0.126626
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.849
ELB improved by 0.11141
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.75
ELB improved by 0.099031
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.661
ELB improved by 0.0889514
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.58
ELB improved by 0.0806754
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.506
ELB improved by 0.0737643
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.439
ELB improved by 0.0678317
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.376
ELB improved by 0.0625554
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.318
ELB improved by 0.0577013
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.265
ELB improved by 0.0531369
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.216
ELB improved by 0.0488238
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.172
ELB improved by 0.0447863
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.131
ELB improved by 0.0410737
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.093
ELB improved by 0.0377289
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.058
ELB improved by 0.0347727
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.026
ELB improved by 0.0322008
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.996
ELB improved by 0.0299881
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.968
ELB improved by 0.0280958
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.941
ELB improved by 0.0264769
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.916
ELB improved by 0.0250816
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.892
ELB improved by 0.0238608
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.87
ELB improved by 0.0227689
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.848
ELB improved by 0.0217654
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.827
ELB improved by 0.0208154
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.807
ELB improved by 0.0198901
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.788
ELB improved by 0.0189667
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.77
ELB improved by 0.0180285
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.753
ELB improved by 0.0170651
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.737
ELB improved by 0.0160732
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.722
ELB improved by 0.0150565
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.708
ELB improved by 0.0140252
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.695
ELB improved by 0.0129943
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.683
ELB improved by 0.0119814
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.672
ELB improved by 0.0110041
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.662
ELB improved by 0.0100776
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.653
ELB improved by 0.00921353
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.119 0.204 2.310
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.049 | 0.015 | 0.065 | |
| getPIPs | 0.051 | 0.001 | 0.052 | |
| graper | 0.081 | 0.004 | 0.085 | |
| makeExampleData | 0.009 | 0.002 | 0.010 | |
| makeExampleDataWithUnequalGroups | 0.012 | 0.000 | 0.013 | |
| plotELBO | 0.321 | 0.027 | 0.348 | |
| plotGroupPenalties | 1.083 | 0.060 | 1.142 | |
| plotPosterior | 0.639 | 0.013 | 0.652 | |
| predict.graper | 2.068 | 0.013 | 2.082 | |
| print.graper | 0.048 | 0.004 | 0.052 | |