Britta Velten
| Snapshot Date: 2026-05-06 13:40 -0400 (Wed, 06 May 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_23 |
| git_last_commit: 7354ec6 |
| git_last_commit_date: 2026-04-28 08:49:19 -0400 (Tue, 28 Apr 2026) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-05-07 11:36 -0400 (Thu, 07 May 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.4 LTS) | x86_64 | 4.6.0 RC (2026-04-17 r89917) -- "Because it was There" | 4990 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.6.0 Patched (2026-04-24 r89963) -- "Because it was There" | 4723 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 944/2418 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.28.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| See other builds for graper in R Universe. | ||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.28.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.28.0.tar.gz |
| StartedAt: 2026-05-06 20:34:32 -0400 (Wed, 06 May 2026) |
| EndedAt: 2026-05-06 20:35:01 -0400 (Wed, 06 May 2026) |
| EllapsedTime: 29.5 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.28.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R version 4.6.0 Patched (2026-04-24 r89963)
* using platform: aarch64-apple-darwin23
* R was compiled by
Apple clang version 17.0.0 (clang-1700.3.19.1)
GNU Fortran (GCC) 14.2.0
* running under: macOS Tahoe 26.3.1
* using session charset: UTF-8
* current time: 2026-05-07 00:34:32 UTC
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.28.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 17.0.0 (clang-1700.6.4.2)’
* used SDK: ‘MacOSX26.2.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.6/Resources/library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.28.0’ ** using staged installation ** libs using C++ compiler: ‘Apple clang version 17.0.0 (clang-1700.6.4.2)’ using SDK: ‘MacOSX26.2.sdk’ clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o clang++ -arch arm64 -std=gnu++20 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R installing to /Library/Frameworks/R.framework/Versions/4.6/Resources/library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.6.0 Patched (2026-04-24 r89963) -- "Because it was There"
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin23
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-917.29
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-585.722
ELB improved by 331.568
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-523.42
ELB improved by 62.3019
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-486.697
ELB improved by 36.723
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.851
ELB improved by 15.8459
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.559
ELB improved by 8.29235
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.413
ELB improved by 6.14639
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.627
ELB improved by 5.78562
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.67
ELB improved by 5.95703
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.691
ELB improved by 5.97848
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.196
ELB improved by 5.49557
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.682
ELB improved by 4.51376
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.302
ELB improved by 3.37991
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.86
ELB improved by 2.44169
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.052
ELB improved by 1.80894
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.627
ELB improved by 1.42471
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.443
ELB improved by 1.18366
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.455
ELB improved by 0.988518
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.67
ELB improved by 0.784259
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.079
ELB improved by 0.590924
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.633
ELB improved by 0.44668
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.283
ELB improved by 0.350217
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.998
ELB improved by 0.284547
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.761
ELB improved by 0.237164
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.56
ELB improved by 0.20118
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.387
ELB improved by 0.172852
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.237
ELB improved by 0.149989
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.106
ELB improved by 0.131198
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.99
ELB improved by 0.115527
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.888
ELB improved by 0.102294
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.797
ELB improved by 0.0909969
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.716
ELB improved by 0.0812559
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.643
ELB improved by 0.0727819
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.577
ELB improved by 0.0653536
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.519
ELB improved by 0.0588015
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.466
ELB improved by 0.0529952
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.418
ELB improved by 0.0478341
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.375
ELB improved by 0.0432388
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.335
ELB improved by 0.039145
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.3
ELB improved by 0.0354984
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.268
ELB improved by 0.0322512
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.238
ELB improved by 0.0293601
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.212
ELB improved by 0.0267856
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.187
ELB improved by 0.0244914
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.165
ELB improved by 0.0224442
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.144
ELB improved by 0.0206142
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.125
ELB improved by 0.018975
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.107
ELB improved by 0.0175031
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.091
ELB improved by 0.0161783
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.076
ELB improved by 0.014983
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.062
ELB improved by 0.0139018
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.05
ELB improved by 0.0129217
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.037
ELB improved by 0.0120312
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.026
ELB improved by 0.0112205
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.016
ELB improved by 0.0104812
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.006
ELB improved by 0.00980559
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-802.082
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-576.733
ELB improved by 225.35
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-516.813
ELB improved by 59.92
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-472.028
ELB improved by 44.7843
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.728
ELB improved by 23.3006
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.107
ELB improved by 9.62038
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.989
ELB improved by 5.11845
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.971
ELB improved by 4.01796
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.956
ELB improved by 4.01473
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.569
ELB improved by 4.3869
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.7
ELB improved by 4.86935
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.472
ELB improved by 5.22752
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.305
ELB improved by 5.16733
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.724
ELB improved by 4.581
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.957
ELB improved by 3.76735
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.951
ELB improved by 3.00564
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.719
ELB improved by 2.23212
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.202
ELB improved by 1.51732
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.187
ELB improved by 1.01512
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.478
ELB improved by 0.708766
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.954
ELB improved by 0.524255
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.545
ELB improved by 0.408329
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.214
ELB improved by 0.331139
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.937
ELB improved by 0.276774
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.701
ELB improved by 0.236636
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.495
ELB improved by 0.205884
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.313
ELB improved by 0.181629
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.151
ELB improved by 0.162046
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.005
ELB improved by 0.14592
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.873
ELB improved by 0.132406
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.752
ELB improved by 0.120901
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.641
ELB improved by 0.110963
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.539
ELB improved by 0.102264
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.444
ELB improved by 0.0945588
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.356
ELB improved by 0.0876615
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.275
ELB improved by 0.0814311
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.199
ELB improved by 0.0757602
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.129
ELB improved by 0.0705663
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.063
ELB improved by 0.0657862
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.002
ELB improved by 0.0613705
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.944
ELB improved by 0.0572806
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.891
ELB improved by 0.0534858
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.841
ELB improved by 0.049961
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.794
ELB improved by 0.0466855
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.751
ELB improved by 0.0436417
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.71
ELB improved by 0.040814
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.672
ELB improved by 0.0381889
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.636
ELB improved by 0.0357536
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.602
ELB improved by 0.0334966
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.571
ELB improved by 0.031407
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.541
ELB improved by 0.0294745
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.514
ELB improved by 0.0276894
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.488
ELB improved by 0.0260423
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.463
ELB improved by 0.0245246
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.44
ELB improved by 0.0231278
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.418
ELB improved by 0.0218439
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.397
ELB improved by 0.0206655
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.378
ELB improved by 0.0195855
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.359
ELB improved by 0.0185972
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.342
ELB improved by 0.0176945
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.325
ELB improved by 0.0168714
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.309
ELB improved by 0.0161227
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.293
ELB improved by 0.0154432
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.278
ELB improved by 0.0148284
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.264
ELB improved by 0.014274
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.25
ELB improved by 0.0137763
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.237
ELB improved by 0.0133315
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.224
ELB improved by 0.0129367
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.211
ELB improved by 0.0125888
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.199
ELB improved by 0.0122855
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.187
ELB improved by 0.0120244
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.175
ELB improved by 0.0118036
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.164
ELB improved by 0.0116214
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.152
ELB improved by 0.0114766
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.141
ELB improved by 0.0113678
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.13
ELB improved by 0.0112944
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.118
ELB improved by 0.0112556
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.107
ELB improved by 0.011251
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.096
ELB improved by 0.0112806
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.084
ELB improved by 0.0113444
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.073
ELB improved by 0.0114427
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.061
ELB improved by 0.0115761
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.05
ELB improved by 0.0117454
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.038
ELB improved by 0.0119515
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.026
ELB improved by 0.0121956
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.013
ELB improved by 0.0124793
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385
ELB improved by 0.0128041
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.987
ELB improved by 0.0131718
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.973
ELB improved by 0.0135844
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.959
ELB improved by 0.0140442
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.945
ELB improved by 0.0145534
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.93
ELB improved by 0.0151144
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.914
ELB improved by 0.0157297
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.898
ELB improved by 0.0164017
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.88
ELB improved by 0.0171329
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.863
ELB improved by 0.0179256
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.844
ELB improved by 0.0187816
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.824
ELB improved by 0.0197026
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.803
ELB improved by 0.0206898
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.782
ELB improved by 0.0217436
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.759
ELB improved by 0.0228634
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.735
ELB improved by 0.0240477
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.709
ELB improved by 0.0252937
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.683
ELB improved by 0.0265968
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.655
ELB improved by 0.0279507
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.626
ELB improved by 0.029347
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.595
ELB improved by 0.030775
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.563
ELB improved by 0.0322212
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.529
ELB improved by 0.0336696
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.494
ELB improved by 0.035101
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.457
ELB improved by 0.0364936
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.419
ELB improved by 0.0378224
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.38
ELB improved by 0.0390598
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.34
ELB improved by 0.040176
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.299
ELB improved by 0.0411393
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.257
ELB improved by 0.0419173
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.215
ELB improved by 0.0424776
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.172
ELB improved by 0.0427897
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.129
ELB improved by 0.0428266
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.087
ELB improved by 0.0425667
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.045
ELB improved by 0.0419959
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.003
ELB improved by 0.0411099
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.963
ELB improved by 0.0399153
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.925
ELB improved by 0.0384306
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.888
ELB improved by 0.036686
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.854
ELB improved by 0.0347221
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.821
ELB improved by 0.0325873
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.791
ELB improved by 0.0303354
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.763
ELB improved by 0.0280214
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.737
ELB improved by 0.025699
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.714
ELB improved by 0.0234168
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.692
ELB improved by 0.0212173
iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.673
ELB improved by 0.0191349
iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.656
ELB improved by 0.017196
iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.641
ELB improved by 0.0154196
iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.627
ELB improved by 0.0138183
iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.614
ELB improved by 0.0123999
iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.603
ELB improved by 0.0111692
iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.593
ELB improved by 0.01013
iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.584
ELB improved by 0.00928721
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-881.295
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-589.005
ELB improved by 292.291
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-529.621
ELB improved by 59.3835
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-486.217
ELB improved by 43.4044
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.171
ELB improved by 21.0458
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.065
ELB improved by 8.10639
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.461
ELB improved by 4.60377
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.488
ELB improved by 3.97234
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.489
ELB improved by 3.99907
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.157
ELB improved by 4.3323
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.39
ELB improved by 4.76659
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.388
ELB improved by 5.00293
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.66
ELB improved by 4.72754
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.742
ELB improved by 3.91815
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.812
ELB improved by 2.93016
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.64
ELB improved by 2.17128
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.96
ELB improved by 1.68043
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.717
ELB improved by 1.24335
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.841
ELB improved by 0.876082
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.192
ELB improved by 0.648449
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.668
ELB improved by 0.524362
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.21
ELB improved by 0.457365
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.789
ELB improved by 0.421827
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.383
ELB improved by 0.405947
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.978
ELB improved by 0.404693
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.562
ELB improved by 0.416379
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.12
ELB improved by 0.441167
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.64
ELB improved by 0.480286
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.105
ELB improved by 0.53547
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.496
ELB improved by 0.608726
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.793
ELB improved by 0.70253
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.974
ELB improved by 0.819392
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.015
ELB improved by 0.959318
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.899
ELB improved by 1.11597
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.624
ELB improved by 1.27463
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.211
ELB improved by 1.413
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.709
ELB improved by 1.50222
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.198
ELB improved by 1.51056
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.778
ELB improved by 1.42035
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.526
ELB improved by 1.25232
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.459
ELB improved by 1.06687
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.517
ELB improved by 0.941825
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.54
ELB improved by 0.976885
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.302
ELB improved by 1.23764
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.999
ELB improved by 1.30365
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.98
ELB improved by 1.01907
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.212
ELB improved by 0.767356
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.666
ELB improved by 0.545976
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.313
ELB improved by 0.353208
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.09
ELB improved by 0.222886
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.942
ELB improved by 0.148615
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.833
ELB improved by 0.108463
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.747
ELB improved by 0.0865524
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.672
ELB improved by 0.074216
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.605
ELB improved by 0.0668801
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.543
ELB improved by 0.0619696
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.485
ELB improved by 0.0580382
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.431
ELB improved by 0.0545355
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.379
ELB improved by 0.0516562
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.329
ELB improved by 0.0500465
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.279
ELB improved by 0.0505062
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.225
ELB improved by 0.0538139
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.164
ELB improved by 0.0604563
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.095
ELB improved by 0.069786
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.016
ELB improved by 0.0787023
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.934
ELB improved by 0.0821449
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.856
ELB improved by 0.0775884
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.788
ELB improved by 0.0679813
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.731
ELB improved by 0.0576567
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.682
ELB improved by 0.0482829
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.643
ELB improved by 0.039658
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.611
ELB improved by 0.0316491
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.586
ELB improved by 0.0246522
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.567
ELB improved by 0.019068
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.552
ELB improved by 0.0149263
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.54
ELB improved by 0.0119662
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.531
ELB improved by 0.00985973
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-853.872
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-591.736
ELB improved by 262.136
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-531.869
ELB improved by 59.8665
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-487.148
ELB improved by 44.7214
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.611
ELB improved by 23.5371
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.78
ELB improved by 8.83105
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.274
ELB improved by 4.506
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.773
ELB improved by 3.50016
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.53
ELB improved by 3.2436
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.273
ELB improved by 3.25687
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.925
ELB improved by 3.34773
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.559
ELB improved by 3.36602
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.394
ELB improved by 3.16497
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.698
ELB improved by 2.69595
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.608
ELB improved by 2.08996
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.052
ELB improved by 1.55625
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.853
ELB improved by 1.19889
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.892
ELB improved by 0.960755
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.135
ELB improved by 0.757029
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.546
ELB improved by 0.588903
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.075
ELB improved by 0.471001
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.682
ELB improved by 0.393555
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.337
ELB improved by 0.344455
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.022
ELB improved by 0.315605
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.721
ELB improved by 0.300881
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.425
ELB improved by 0.295598
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.129
ELB improved by 0.29657
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.827
ELB improved by 0.301808
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.517
ELB improved by 0.310111
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.196
ELB improved by 0.320752
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.863
ELB improved by 0.333301
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.515
ELB improved by 0.347532
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.152
ELB improved by 0.363347
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.771
ELB improved by 0.380704
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.372
ELB improved by 0.399521
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.952
ELB improved by 0.419562
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.512
ELB improved by 0.440307
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.051
ELB improved by 0.460822
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.571
ELB improved by 0.479661
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.077
ELB improved by 0.49483
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.573
ELB improved by 0.503885
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.068
ELB improved by 0.504285
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.574
ELB improved by 0.493996
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.102
ELB improved by 0.472178
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.663
ELB improved by 0.439588
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.264
ELB improved by 0.398447
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.912
ELB improved by 0.351876
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.609
ELB improved by 0.303247
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.353
ELB improved by 0.255643
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.142
ELB improved by 0.211527
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.969
ELB improved by 0.172569
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.83
ELB improved by 0.139567
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.717
ELB improved by 0.112526
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.626
ELB improved by 0.0908856
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.552
ELB improved by 0.07381
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.492
ELB improved by 0.0604176
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.442
ELB improved by 0.0499142
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.4
ELB improved by 0.041643
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.365
ELB improved by 0.0350883
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.336
ELB improved by 0.0298563
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.31
ELB improved by 0.0256498
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.288
ELB improved by 0.0222443
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.268
ELB improved by 0.0194684
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.251
ELB improved by 0.01719
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.236
ELB improved by 0.015306
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.222
ELB improved by 0.0137361
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.21
ELB improved by 0.0124171
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.198
ELB improved by 0.0112996
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.188
ELB improved by 0.0103448
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.178
ELB improved by 0.00952243
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
1.017 0.081 1.094
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.029 | 0.005 | 0.035 | |
| getPIPs | 0.026 | 0.005 | 0.031 | |
| graper | 0.043 | 0.007 | 0.052 | |
| makeExampleData | 0.004 | 0.001 | 0.004 | |
| makeExampleDataWithUnequalGroups | 0.005 | 0.000 | 0.004 | |
| plotELBO | 0.121 | 0.006 | 0.129 | |
| plotGroupPenalties | 0.409 | 0.008 | 0.424 | |
| plotPosterior | 0.210 | 0.007 | 0.221 | |
| predict.graper | 1.014 | 0.032 | 1.073 | |
| print.graper | 0.027 | 0.007 | 0.034 | |