Britta Velten
| Snapshot Date: 2026-03-04 13:40 -0500 (Wed, 04 Mar 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 95474d7 |
| git_last_commit_date: 2025-10-29 10:49:21 -0500 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-03-05 11:35 -0500 (Thu, 05 Mar 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2026-01-15 r89304) -- "Unsuffered Consequences" | 4891 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | R Under development (unstable) (2026-01-15 r89304) -- "Unsuffered Consequences" | 4583 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 926/2357 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.27.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| See other builds for graper in R Universe. | ||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.27.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz |
| StartedAt: 2026-03-04 20:11:50 -0500 (Wed, 04 Mar 2026) |
| EndedAt: 2026-03-04 20:12:23 -0500 (Wed, 04 Mar 2026) |
| EllapsedTime: 32.4 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R Under development (unstable) (2026-01-15 r89304)
* using platform: aarch64-apple-darwin20
* R was compiled by
Apple clang version 16.0.0 (clang-1600.0.26.6)
GNU Fortran (GCC) 14.2.0
* running under: macOS Sonoma 14.8.3
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’
* used SDK: ‘MacOSX11.3.1.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.27.0’ ** using staged installation ** libs using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’ using SDK: ‘MacOSX11.3.1.sdk’ clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R installing to /Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R Under development (unstable) (2026-01-15 r89304) -- "Unsuffered Consequences"
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin20
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-887.74
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-560.007
ELB improved by 327.734
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-505.984
ELB improved by 54.0226
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-478.631
ELB improved by 27.3531
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.092
ELB improved by 10.5385
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.567
ELB improved by 5.52489
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.119
ELB improved by 4.44844
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.557
ELB improved by 4.56169
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.307
ELB improved by 5.24996
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.92
ELB improved by 6.38787
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.326
ELB improved by 7.59394
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.576
ELB improved by 7.74948
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.301
ELB improved by 6.27511
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.113
ELB improved by 4.18838
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.532
ELB improved by 2.58017
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.899
ELB improved by 1.63333
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.785
ELB improved by 1.11381
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.978
ELB improved by 0.806974
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.378
ELB improved by 0.600342
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.914
ELB improved by 0.463912
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.531
ELB improved by 0.382891
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.193
ELB improved by 0.338036
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.88
ELB improved by 0.312981
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.585
ELB improved by 0.294919
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.311
ELB improved by 0.274585
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.061
ELB improved by 0.249914
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.836
ELB improved by 0.225187
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.631
ELB improved by 0.204409
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.442
ELB improved by 0.188684
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.265
ELB improved by 0.177755
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.093
ELB improved by 0.171583
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.921
ELB improved by 0.171989
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.737
ELB improved by 0.184413
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.519
ELB improved by 0.217586
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.245
ELB improved by 0.273994
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.92
ELB improved by 0.325182
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.598
ELB improved by 0.32182
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.328
ELB improved by 0.269904
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.115
ELB improved by 0.213032
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.949
ELB improved by 0.166371
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.821
ELB improved by 0.128126
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.723
ELB improved by 0.0974794
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.649
ELB improved by 0.0746007
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.59
ELB improved by 0.0585777
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.542
ELB improved by 0.0476654
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.502
ELB improved by 0.0401393
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.468
ELB improved by 0.0347201
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.437
ELB improved by 0.0305968
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.41
ELB improved by 0.0272968
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.385
ELB improved by 0.0245535
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.363
ELB improved by 0.0222139
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.343
ELB improved by 0.0201855
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.324
ELB improved by 0.0184083
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.307
ELB improved by 0.0168401
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.292
ELB improved by 0.0154492
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.278
ELB improved by 0.0142106
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.265
ELB improved by 0.0131042
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.253
ELB improved by 0.012113
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.241
ELB improved by 0.011223
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.231
ELB improved by 0.010422
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.221
ELB improved by 0.00969968
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-902.2
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-557.232
ELB improved by 344.968
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-498.619
ELB improved by 58.6126
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.784
ELB improved by 29.8352
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.393
ELB improved by 12.3906
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.521
ELB improved by 5.87183
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.638
ELB improved by 3.88309
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.53
ELB improved by 3.10785
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.765
ELB improved by 2.76585
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.168
ELB improved by 2.59623
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.677
ELB improved by 2.49116
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.282
ELB improved by 2.39529
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.024
ELB improved by 2.25747
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.995
ELB improved by 2.0293
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.297
ELB improved by 1.69786
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.987
ELB improved by 1.31
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.042
ELB improved by 0.944835
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.382
ELB improved by 0.660778
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.912
ELB improved by 0.469592
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.561
ELB improved by 0.35121
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.281
ELB improved by 0.279739
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.045
ELB improved by 0.235955
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.837
ELB improved by 0.208204
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.647
ELB improved by 0.189909
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.47
ELB improved by 0.177382
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.301
ELB improved by 0.168496
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.139
ELB improved by 0.16197
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.982
ELB improved by 0.15699
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.829
ELB improved by 0.153012
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.68
ELB improved by 0.149652
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.533
ELB improved by 0.146632
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.389
ELB improved by 0.143748
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.248
ELB improved by 0.140856
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.11
ELB improved by 0.13786
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.976
ELB improved by 0.134711
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.844
ELB improved by 0.1314
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.716
ELB improved by 0.127945
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.592
ELB improved by 0.124393
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.471
ELB improved by 0.120802
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.354
ELB improved by 0.117237
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.24
ELB improved by 0.113761
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.13
ELB improved by 0.110428
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.023
ELB improved by 0.10728
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.918
ELB improved by 0.104346
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.817
ELB improved by 0.101639
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.717
ELB improved by 0.0991599
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.62
ELB improved by 0.0968969
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.526
ELB improved by 0.0948289
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.433
ELB improved by 0.0929275
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.342
ELB improved by 0.0911588
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.252
ELB improved by 0.0894855
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.164
ELB improved by 0.0878694
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.078
ELB improved by 0.0862724
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.993
ELB improved by 0.0846588
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.91
ELB improved by 0.0829968
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.829
ELB improved by 0.0812597
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.75
ELB improved by 0.0794277
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.672
ELB improved by 0.0774884
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.597
ELB improved by 0.0754379
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.523
ELB improved by 0.0732814
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.452
ELB improved by 0.0710324
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.384
ELB improved by 0.0687127
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.317
ELB improved by 0.0663515
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.253
ELB improved by 0.0639833
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.192
ELB improved by 0.0616467
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.132
ELB improved by 0.0593815
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.075
ELB improved by 0.0572263
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.02
ELB improved by 0.0552153
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.966
ELB improved by 0.0533751
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.915
ELB improved by 0.0517219
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.864
ELB improved by 0.0502622
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.815
ELB improved by 0.0489967
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.768
ELB improved by 0.0479324
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.72
ELB improved by 0.0471027
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.674
ELB improved by 0.0465915
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.627
ELB improved by 0.0465565
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.58
ELB improved by 0.0472472
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.531
ELB improved by 0.0490222
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.479
ELB improved by 0.0523817
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.421
ELB improved by 0.058038
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.354
ELB improved by 0.0670441
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.273
ELB improved by 0.0809983
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.17
ELB improved by 0.102297
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.036
ELB improved by 0.134162
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.857
ELB improved by 0.179192
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.624
ELB improved by 0.233346
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.347
ELB improved by 0.276605
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.063
ELB improved by 0.283757
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.804
ELB improved by 0.259441
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.574
ELB improved by 0.229881
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.368
ELB improved by 0.205667
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.191
ELB improved by 0.177115
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.056
ELB improved by 0.135339
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.966
ELB improved by 0.0896163
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.912
ELB improved by 0.0540751
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.88
ELB improved by 0.0320828
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.86
ELB improved by 0.0198442
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.847
ELB improved by 0.0131778
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.838
ELB improved by 0.00946836
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-849.054
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-572.363
ELB improved by 276.691
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-511.814
ELB improved by 60.5495
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-473.75
ELB improved by 38.0642
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.141
ELB improved by 15.6087
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.259
ELB improved by 5.88205
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.31
ELB improved by 2.94852
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.357
ELB improved by 1.95311
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.76
ELB improved by 1.59746
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.327
ELB improved by 1.43286
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.003
ELB improved by 1.32421
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.771
ELB improved by 1.23201
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.63
ELB improved by 1.1411
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.586
ELB improved by 1.04384
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.648
ELB improved by 0.937522
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.824
ELB improved by 0.82458
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.112
ELB improved by 0.711718
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.505
ELB improved by 0.606999
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.988
ELB improved by 0.516756
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.544
ELB improved by 0.444232
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.154
ELB improved by 0.38986
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.802
ELB improved by 0.352125
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.474
ELB improved by 0.328457
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.158
ELB improved by 0.315988
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.846
ELB improved by 0.312056
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.531
ELB improved by 0.314419
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.21
ELB improved by 0.321243
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.879
ELB improved by 0.330981
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.537
ELB improved by 0.342245
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.183
ELB improved by 0.353761
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.819
ELB improved by 0.364452
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.445
ELB improved by 0.373623
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.064
ELB improved by 0.381077
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.677
ELB improved by 0.387047
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.285
ELB improved by 0.391954
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.889
ELB improved by 0.396114
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.489
ELB improved by 0.399562
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.087
ELB improved by 0.402062
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.684
ELB improved by 0.403375
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.28
ELB improved by 0.403763
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.875
ELB improved by 0.404632
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.466
ELB improved by 0.409296
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.042
ELB improved by 0.424064
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.582
ELB improved by 0.460056
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.047
ELB improved by 0.534605
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.382
ELB improved by 0.665588
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.533
ELB improved by 0.848998
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.52
ELB improved by 1.01268
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.475
ELB improved by 1.04483
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.493
ELB improved by 0.981953
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.613
ELB improved by 0.879859
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.887
ELB improved by 0.72631
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.32
ELB improved by 0.567546
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.868
ELB improved by 0.451949
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.482
ELB improved by 0.385456
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.122
ELB improved by 0.359767
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.775
ELB improved by 0.347801
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.472
ELB improved by 0.302606
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.253
ELB improved by 0.219236
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.111
ELB improved by 0.14205
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.018
ELB improved by 0.0925965
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.953
ELB improved by 0.0648126
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.904
ELB improved by 0.0491804
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.864
ELB improved by 0.0398336
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.83
ELB improved by 0.0337816
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.801
ELB improved by 0.0295494
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.775
ELB improved by 0.0263943
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.751
ELB improved by 0.0239281
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.729
ELB improved by 0.0219397
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.708
ELB improved by 0.0203111
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.689
ELB improved by 0.0189758
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.671
ELB improved by 0.017899
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.654
ELB improved by 0.0170681
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.638
ELB improved by 0.0164908
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.622
ELB improved by 0.0161968
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.605
ELB improved by 0.0162462
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.589
ELB improved by 0.0167441
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.571
ELB improved by 0.0178681
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.551
ELB improved by 0.0199144
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.528
ELB improved by 0.0233769
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.498
ELB improved by 0.029072
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.46
ELB improved by 0.038312
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.407
ELB improved by 0.0530536
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.331
ELB improved by 0.0757154
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.224
ELB improved by 0.107834
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.077
ELB improved by 0.146222
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.9
ELB improved by 0.177144
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.722
ELB improved by 0.17852
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.579
ELB improved by 0.143138
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.485
ELB improved by 0.093191
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.432
ELB improved by 0.0532519
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.403
ELB improved by 0.0293831
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.386
ELB improved by 0.0170304
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.375
ELB improved by 0.0109617
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.367
ELB improved by 0.00796103
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-884.87
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-579.718
ELB improved by 305.152
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-521.299
ELB improved by 58.4186
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-484.907
ELB improved by 36.3917
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-469.567
ELB improved by 15.34
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.58
ELB improved by 6.98727
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.085
ELB improved by 4.49493
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.375
ELB improved by 3.71036
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.929
ELB improved by 3.44583
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.573
ELB improved by 3.35625
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.282
ELB improved by 3.29088
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.148
ELB improved by 3.1336
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.35
ELB improved by 2.79794
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.062
ELB improved by 2.28867
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.342
ELB improved by 1.71905
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.121
ELB improved by 1.22153
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.264
ELB improved by 0.857277
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.647
ELB improved by 0.616911
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.181
ELB improved by 0.465338
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.811
ELB improved by 0.370371
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.501
ELB improved by 0.309857
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.231
ELB improved by 0.270168
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.988
ELB improved by 0.243329
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.763
ELB improved by 0.224773
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.551
ELB improved by 0.211884
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.348
ELB improved by 0.203139
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.15
ELB improved by 0.197616
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.956
ELB improved by 0.19473
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.761
ELB improved by 0.194075
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.566
ELB improved by 0.195336
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.368
ELB improved by 0.198238
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.165
ELB improved by 0.20251
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.957
ELB improved by 0.207879
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.743
ELB improved by 0.214083
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.522
ELB improved by 0.220921
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.294
ELB improved by 0.228345
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.058
ELB improved by 0.236586
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.811
ELB improved by 0.246346
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.552
ELB improved by 0.259091
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.275
ELB improved by 0.27754
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.968
ELB improved by 0.306423
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.615
ELB improved by 0.352712
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.194
ELB improved by 0.421157
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.695
ELB improved by 0.499321
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.14
ELB improved by 0.554874
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.563
ELB improved by 0.577245
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.978
ELB improved by 0.58517
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.388
ELB improved by 0.589627
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.799
ELB improved by 0.588935
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.221
ELB improved by 0.578021
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.668
ELB improved by 0.55339
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.152
ELB improved by 0.515252
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.685
ELB improved by 0.46755
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.269
ELB improved by 0.416309
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.901
ELB improved by 0.367478
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.576
ELB improved by 0.325429
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.283
ELB improved by 0.292574
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.013
ELB improved by 0.269749
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.757
ELB improved by 0.256778
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.503
ELB improved by 0.253471
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.24
ELB improved by 0.263133
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.938
ELB improved by 0.301568
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.538
ELB improved by 0.400366
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.004
ELB improved by 0.534183
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.459
ELB improved by 0.545312
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.029
ELB improved by 0.429209
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.702
ELB improved by 0.32727
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.422
ELB improved by 0.279915
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.156
ELB improved by 0.266586
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.896
ELB improved by 0.259812
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.647
ELB improved by 0.248817
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.411
ELB improved by 0.23621
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.196
ELB improved by 0.21489
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.018
ELB improved by 0.178206
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.874
ELB improved by 0.143884
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.742
ELB improved by 0.131674
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.598
ELB improved by 0.144166
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.428
ELB improved by 0.170117
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.242
ELB improved by 0.185573
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.071
ELB improved by 0.17095
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.935
ELB improved by 0.136343
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.829
ELB improved by 0.106398
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.738
ELB improved by 0.0902216
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.657
ELB improved by 0.0809382
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.587
ELB improved by 0.0704776
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.528
ELB improved by 0.0584949
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.48
ELB improved by 0.0487502
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.437
ELB improved by 0.0427254
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.398
ELB improved by 0.0389888
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.363
ELB improved by 0.0353596
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.332
ELB improved by 0.0305548
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.307
ELB improved by 0.0247116
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.288
ELB improved by 0.0188445
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.275
ELB improved by 0.0138975
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.264
ELB improved by 0.0102444
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.257
ELB improved by 0.00777646
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
1.073 0.096 1.196
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.012 | 0.008 | 0.022 | |
| getPIPs | 0.011 | 0.009 | 0.020 | |
| graper | 0.017 | 0.011 | 0.028 | |
| makeExampleData | 0.002 | 0.000 | 0.002 | |
| makeExampleDataWithUnequalGroups | 0.002 | 0.001 | 0.003 | |
| plotELBO | 0.114 | 0.009 | 0.126 | |
| plotGroupPenalties | 0.340 | 0.008 | 0.356 | |
| plotPosterior | 0.310 | 0.013 | 0.339 | |
| predict.graper | 0.221 | 0.038 | 0.277 | |
| print.graper | 0.010 | 0.005 | 0.016 | |