Britta Velten
| Snapshot Date: 2026-05-07 13:40 -0400 (Thu, 07 May 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_23 |
| git_last_commit: 7354ec6 |
| git_last_commit_date: 2026-04-28 08:49:19 -0400 (Tue, 28 Apr 2026) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-05-08 11:33 -0400 (Fri, 08 May 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.4 LTS) | x86_64 | 4.6.0 RC (2026-04-17 r89917) -- "Because it was There" | 4992 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.6.0 Patched (2026-04-24 r89963) -- "Because it was There" | 4725 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 944/2418 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.28.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | ERROR | skipped | skipped | |||||||||
| See other builds for graper in R Universe. | ||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.28.0 |
| Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.28.0.tar.gz |
| StartedAt: 2026-05-08 00:39:50 -0400 (Fri, 08 May 2026) |
| EndedAt: 2026-05-08 00:41:22 -0400 (Fri, 08 May 2026) |
| EllapsedTime: 92.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.28.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R version 4.6.0 RC (2026-04-17 r89917)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
* running under: Ubuntu 24.04.4 LTS
* using session charset: UTF-8
* current time: 2026-05-08 04:39:50 UTC
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.28.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.23-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.28.0’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’ g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++20 -shared -L/home/biocbuild/bbs-3.23-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.23-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.23-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.23-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.6.0 RC (2026-04-17 r89917) -- "Because it was There"
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-895.386
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-582.312
ELB improved by 313.074
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-525.311
ELB improved by 57.0005
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-482.915
ELB improved by 42.3964
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.695
ELB improved by 21.2195
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.207
ELB improved by 8.48856
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.324
ELB improved by 4.88254
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.521
ELB improved by 3.80287
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.069
ELB improved by 3.45237
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.624
ELB improved by 3.44536
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.053
ELB improved by 3.57028
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.402
ELB improved by 3.65151
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.906
ELB improved by 3.49591
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.909
ELB improved by 2.99692
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.637
ELB improved by 2.27226
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.065
ELB improved by 1.57181
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.01
ELB improved by 1.0547
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.281
ELB improved by 0.7289
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.747
ELB improved by 0.534351
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.334
ELB improved by 0.413203
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.004
ELB improved by 0.329888
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.736
ELB improved by 0.268132
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.514
ELB improved by 0.221908
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.326
ELB improved by 0.187951
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.163
ELB improved by 0.163139
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.018
ELB improved by 0.144696
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.888
ELB improved by 0.130597
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.768
ELB improved by 0.119534
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.657
ELB improved by 0.110699
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.554
ELB improved by 0.103589
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.456
ELB improved by 0.0978842
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.362
ELB improved by 0.0933797
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.273
ELB improved by 0.0899536
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.185
ELB improved by 0.0875531
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.099
ELB improved by 0.0861979
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.013
ELB improved by 0.0859958
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.926
ELB improved by 0.0871757
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.835
ELB improved by 0.090142
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.74
ELB improved by 0.0955487
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.636
ELB improved by 0.104363
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.518
ELB improved by 0.117791
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.381
ELB improved by 0.136767
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.22
ELB improved by 0.160686
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.034
ELB improved by 0.186135
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.826
ELB improved by 0.208359
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.6
ELB improved by 0.226017
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.357
ELB improved by 0.243087
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.091
ELB improved by 0.265522
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.793
ELB improved by 0.298643
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.446
ELB improved by 0.346411
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.037
ELB improved by 0.40912
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.553
ELB improved by 0.483807
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.977
ELB improved by 0.576506
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.277
ELB improved by 0.69963
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.46
ELB improved by 0.81715
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.593
ELB improved by 0.866421
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.717
ELB improved by 0.876181
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.831
ELB improved by 0.886456
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.945
ELB improved by 0.886009
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.098
ELB improved by 0.846944
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.34
ELB improved by 0.758025
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.7
ELB improved by 0.639715
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.173
ELB improved by 0.526773
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.732
ELB improved by 0.440906
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.354
ELB improved by 0.378076
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.037
ELB improved by 0.316957
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.79
ELB improved by 0.247114
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.611
ELB improved by 0.179695
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.484
ELB improved by 0.126849
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.393
ELB improved by 0.0903319
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.327
ELB improved by 0.0662901
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.277
ELB improved by 0.0504999
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.237
ELB improved by 0.0399281
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.204
ELB improved by 0.0326332
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.177
ELB improved by 0.027409
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.153
ELB improved by 0.0235145
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.133
ELB improved by 0.0204984
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.115
ELB improved by 0.0180851
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.098
ELB improved by 0.0161044
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.084
ELB improved by 0.0144478
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.071
ELB improved by 0.0130433
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.059
ELB improved by 0.0118409
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.048
ELB improved by 0.0108039
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.038
ELB improved by 0.00990449
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-905.937
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-594.876
ELB improved by 311.061
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-536.269
ELB improved by 58.6076
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-494.439
ELB improved by 41.8299
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.938
ELB improved by 22.5006
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.958
ELB improved by 9.9796
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.655
ELB improved by 5.30309
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.759
ELB improved by 3.89615
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.357
ELB improved by 3.40242
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.162
ELB improved by 3.19475
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.14
ELB improved by 3.02157
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.369
ELB improved by 2.77183
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.951
ELB improved by 2.41769
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.958
ELB improved by 1.99278
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.395
ELB improved by 1.56349
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.211
ELB improved by 1.18375
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.338
ELB improved by 0.872838
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.706
ELB improved by 0.632474
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.246
ELB improved by 0.459675
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.902
ELB improved by 0.343705
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.634
ELB improved by 0.268715
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.413
ELB improved by 0.220275
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.225
ELB improved by 0.188181
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.059
ELB improved by 0.166082
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.909
ELB improved by 0.150247
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.77
ELB improved by 0.138508
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.641
ELB improved by 0.129587
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.518
ELB improved by 0.12271
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.401
ELB improved by 0.117385
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.287
ELB improved by 0.113289
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.177
ELB improved by 0.110195
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.069
ELB improved by 0.107939
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.963
ELB improved by 0.106398
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.857
ELB improved by 0.105477
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.752
ELB improved by 0.105101
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.647
ELB improved by 0.105211
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.541
ELB improved by 0.105767
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.434
ELB improved by 0.10674
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.326
ELB improved by 0.108118
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.216
ELB improved by 0.109904
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.104
ELB improved by 0.112118
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.989
ELB improved by 0.114798
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.871
ELB improved by 0.117997
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.75
ELB improved by 0.121786
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.623
ELB improved by 0.126246
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.492
ELB improved by 0.131467
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.354
ELB improved by 0.137539
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.21
ELB improved by 0.144538
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.057
ELB improved by 0.152515
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.896
ELB improved by 0.161466
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.725
ELB improved by 0.171314
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.543
ELB improved by 0.181873
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.35
ELB improved by 0.192815
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.146
ELB improved by 0.203652
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.933
ELB improved by 0.213733
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.71
ELB improved by 0.222278
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.482
ELB improved by 0.228457
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.25
ELB improved by 0.231513
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.019
ELB improved by 0.230884
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.793
ELB improved by 0.226298
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.575
ELB improved by 0.217783
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.37
ELB improved by 0.205622
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.179
ELB improved by 0.190304
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.007
ELB improved by 0.17254
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.854
ELB improved by 0.153286
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.72
ELB improved by 0.133671
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.605
ELB improved by 0.114782
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.508
ELB improved by 0.0974393
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.426
ELB improved by 0.0820944
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.357
ELB improved by 0.0688753
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.299
ELB improved by 0.057694
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.251
ELB improved by 0.0483511
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.21
ELB improved by 0.0406074
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.176
ELB improved by 0.0342232
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.147
ELB improved by 0.028977
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.122
ELB improved by 0.0246731
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.101
ELB improved by 0.021143
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.083
ELB improved by 0.0182445
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.067
ELB improved by 0.0158587
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.053
ELB improved by 0.0138881
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.041
ELB improved by 0.0122527
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.03
ELB improved by 0.010888
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.02
ELB improved by 0.00974178
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-885.052
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-579.057
ELB improved by 305.995
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-519.079
ELB improved by 59.9777
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-479.429
ELB improved by 39.6502
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.012
ELB improved by 16.417
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.573
ELB improved by 6.439
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.792
ELB improved by 3.78055
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.638
ELB improved by 3.15401
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.627
ELB improved by 3.01182
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.603
ELB improved by 3.02376
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.485
ELB improved by 3.11792
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.23
ELB improved by 3.25472
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.874
ELB improved by 3.35666
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.594
ELB improved by 3.27948
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.7
ELB improved by 2.89434
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.457
ELB improved by 2.24268
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.912
ELB improved by 1.54507
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.91
ELB improved by 1.00158
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.258
ELB improved by 0.652152
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.817
ELB improved by 0.441139
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.506
ELB improved by 0.311606
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.275
ELB improved by 0.230133
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.097
ELB improved by 0.178124
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.953
ELB improved by 0.144041
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.833
ELB improved by 0.120649
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.729
ELB improved by 0.103674
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.638
ELB improved by 0.0907056
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.558
ELB improved by 0.0803879
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.486
ELB improved by 0.0719348
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.421
ELB improved by 0.0648663
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.362
ELB improved by 0.0588708
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.308
ELB improved by 0.0537337
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.259
ELB improved by 0.0492996
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.214
ELB improved by 0.0454509
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.172
ELB improved by 0.042096
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.132
ELB improved by 0.0391617
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.096
ELB improved by 0.0365888
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.061
ELB improved by 0.0343282
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.029
ELB improved by 0.0323393
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.999
ELB improved by 0.0305882
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.97
ELB improved by 0.0290459
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.942
ELB improved by 0.0276881
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.915
ELB improved by 0.0264941
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.89
ELB improved by 0.0254461
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.865
ELB improved by 0.0245288
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.842
ELB improved by 0.023729
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.819
ELB improved by 0.0230355
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.796
ELB improved by 0.0224385
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.774
ELB improved by 0.0219295
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.753
ELB improved by 0.0215012
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.732
ELB improved by 0.0211474
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.711
ELB improved by 0.0208626
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.69
ELB improved by 0.0206422
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.67
ELB improved by 0.0204823
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.649
ELB improved by 0.0203795
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.629
ELB improved by 0.0203312
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.609
ELB improved by 0.0203352
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.588
ELB improved by 0.0203899
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.568
ELB improved by 0.0204944
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.547
ELB improved by 0.0206481
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.526
ELB improved by 0.0208511
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.505
ELB improved by 0.0211043
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.484
ELB improved by 0.0214092
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.462
ELB improved by 0.021768
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.44
ELB improved by 0.0221841
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.417
ELB improved by 0.0226617
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.394
ELB improved by 0.0232065
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.37
ELB improved by 0.0238258
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.345
ELB improved by 0.0245285
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.32
ELB improved by 0.025326
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.294
ELB improved by 0.0262326
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.267
ELB improved by 0.0272661
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.238
ELB improved by 0.0284486
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.208
ELB improved by 0.0298083
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.177
ELB improved by 0.0313806
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.144
ELB improved by 0.0332107
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.108
ELB improved by 0.0353566
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.071
ELB improved by 0.0378933
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.03
ELB improved by 0.040919
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.985
ELB improved by 0.0445631
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.936
ELB improved by 0.0489978
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.882
ELB improved by 0.0544543
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.82
ELB improved by 0.0612445
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.751
ELB improved by 0.0697901
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.67
ELB improved by 0.0806586
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.575
ELB improved by 0.0946021
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.463
ELB improved by 0.112588
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.327
ELB improved by 0.135795
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.161
ELB improved by 0.165557
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.958
ELB improved by 0.20325
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.708
ELB improved by 0.250237
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.4
ELB improved by 0.308076
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.021
ELB improved by 0.378994
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.555
ELB improved by 0.466235
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.981
ELB improved by 0.573448
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.28
ELB improved by 0.70119
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.444
ELB improved by 0.83596
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.508
ELB improved by 0.935649
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.562
ELB improved by 0.945977
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.707
ELB improved by 0.855672
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.994
ELB improved by 0.713058
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.42
ELB improved by 0.573186
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.957
ELB improved by 0.463549
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.572
ELB improved by 0.384855
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.252
ELB improved by 0.319604
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.996
ELB improved by 0.256206
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.796
ELB improved by 0.199965
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.64
ELB improved by 0.156361
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.515
ELB improved by 0.125271
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.409
ELB improved by 0.105163
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.315
ELB improved by 0.0946124
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.222
ELB improved by 0.0926398
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.124
ELB improved by 0.0982146
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.016
ELB improved by 0.10814
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.901
ELB improved by 0.114708
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.792
ELB improved by 0.108845
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.703
ELB improved by 0.0897265
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.637
ELB improved by 0.0660585
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.591
ELB improved by 0.04597
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.559
ELB improved by 0.0318796
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.536
ELB improved by 0.022805
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.519
ELB improved by 0.0171013
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.505
ELB improved by 0.0134804
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.494
ELB improved by 0.0111143
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.485
ELB improved by 0.009507
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-842.164
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-568.037
ELB improved by 274.127
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-507.306
ELB improved by 60.731
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.852
ELB improved by 38.4541
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.373
ELB improved by 17.4795
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.164
ELB improved by 7.20867
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.337
ELB improved by 3.82677
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.614
ELB improved by 2.72343
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.356
ELB improved by 2.25777
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.363
ELB improved by 1.99294
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.573
ELB improved by 1.79061
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.961
ELB improved by 1.61142
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.518
ELB improved by 1.44302
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.238
ELB improved by 1.28015
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.116
ELB improved by 1.12185
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.145
ELB improved by 0.971206
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.312
ELB improved by 0.832786
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.603
ELB improved by 0.709421
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423
ELB improved by 0.602271
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.487
ELB improved by 0.513162
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.043
ELB improved by 0.443844
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.65
ELB improved by 0.39317
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.293
ELB improved by 0.357488
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.959
ELB improved by 0.333269
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.641
ELB improved by 0.318282
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.33
ELB improved by 0.31097
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.021
ELB improved by 0.309672
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.708
ELB improved by 0.312523
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.39
ELB improved by 0.317722
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.066
ELB improved by 0.323803
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.737
ELB improved by 0.329791
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.401
ELB improved by 0.33527
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.061
ELB improved by 0.340383
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.715
ELB improved by 0.345772
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.363
ELB improved by 0.352487
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.001
ELB improved by 0.361917
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.625
ELB improved by 0.375736
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.229
ELB improved by 0.395786
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.806
ELB improved by 0.423462
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.348
ELB improved by 0.458058
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.853
ELB improved by 0.494992
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.325
ELB improved by 0.528157
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.769
ELB improved by 0.556121
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.19
ELB improved by 0.57829
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.61
ELB improved by 0.580546
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.066
ELB improved by 0.544106
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.59
ELB improved by 0.475901
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.191
ELB improved by 0.398329
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.867
ELB improved by 0.323955
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.61
ELB improved by 0.257229
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.41
ELB improved by 0.200463
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.255
ELB improved by 0.15466
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.136
ELB improved by 0.119294
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.043
ELB improved by 0.0927659
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.97
ELB improved by 0.0731371
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.911
ELB improved by 0.0586384
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.863
ELB improved by 0.0478603
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.824
ELB improved by 0.0397552
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.79
ELB improved by 0.0335697
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.761
ELB improved by 0.0287694
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.736
ELB improved by 0.0249772
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.714
ELB improved by 0.0219279
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.695
ELB improved by 0.0194344
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.678
ELB improved by 0.0173641
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.662
ELB improved by 0.0156221
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.648
ELB improved by 0.0141395
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.635
ELB improved by 0.0128653
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.623
ELB improved by 0.0117611
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.612
ELB improved by 0.0107976
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.602
ELB improved by 0.00995144
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.383 0.222 2.591
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.053 | 0.023 | 0.076 | |
| getPIPs | 0.075 | 0.029 | 0.104 | |
| graper | 0.081 | 0.019 | 0.100 | |
| makeExampleData | 0.009 | 0.001 | 0.010 | |
| makeExampleDataWithUnequalGroups | 0.011 | 0.000 | 0.011 | |
| plotELBO | 0.301 | 0.026 | 0.325 | |
| plotGroupPenalties | 0.937 | 0.009 | 0.946 | |
| plotPosterior | 0.656 | 0.010 | 0.667 | |
| predict.graper | 2.073 | 0.071 | 2.144 | |
| print.graper | 0.050 | 0.014 | 0.066 | |