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BUILD report for illuminaio on tokay2

This page was generated on 2020-04-15 03:20:12 -0400 (Wed, 15 Apr 2020).

These builds are using Rtools40 and R-testing by Jeroen Ooms (available at https://cran.r-project.org/bin/windows/testing/rtools40.html)
TO THE DEVELOPERS/MAINTAINERS OF THE illuminaio PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 48/89HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
illuminaio 0.29.0
Kasper Daniel Hansen
Snapshot Date: 2020-04-14 17:00:05 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/illuminaio
Branch: master
Last Commit: 3e99732
Last Changed Date: 2019-10-29 13:36:26 -0400 (Tue, 29 Oct 2019)
tokay2 Windows Server 2012 R2 Standard / x64  OK [ ERROR ] skipped  skipped 

Summary

Package: illuminaio
Version: 0.29.0
Command: chmod a+r illuminaio -R && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data illuminaio
StartedAt: 2020-04-14 19:22:02 -0400 (Tue, 14 Apr 2020)
EndedAt: 2020-04-14 19:22:26 -0400 (Tue, 14 Apr 2020)
EllapsedTime: 23.8 seconds
RetCode: 1
Status:  ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   chmod a+r illuminaio -R && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data illuminaio
###
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* checking for file 'illuminaio/DESCRIPTION' ... OK
* preparing 'illuminaio':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'EncryptedFormat.Rnw' using Sweave
Warning in system(paste(shQuote(texi2dvi), if (quiet) "--quiet" else "",  :
  running command '"C:\PROGRA~1\MIKTEX~1.9\miktex\bin\x64\texify.exe" --quiet --pdf "EncryptedFormat.tex" --max-iterations=20 -I "C:/Users/bioctesting/bbs-3.11-bioc-testing/R/share/texmf/tex/latex" -I "C:/Users/bioctesting/bbs-3.11-bioc-testing/R/share/texmf/bibtex/bst"' had status 1
Error: processing vignette 'EncryptedFormat.Rnw' failed with diagnostics:
Failed to locate 'texi2pdf' output file 'EncryptedFormat.pdf' for vignette with name 'EncryptedFormat' and engine 'utils::Sweave'. The following files exist in working directory 'C:\Users\bioctesting\bbs-3.11-bioc-testing\tmpdir\RtmpkbcPAQ\Rbuild17e83e077673\illuminaio\vignettes': 'EncryptedFormat.Rnw' (5387 bytes), 'EncryptedFormat.tex' (5496 bytes), 'illuminaio.Rnw' (8217 bytes), 'illuminaio.bib' (397 bytes)
--- failed re-building 'EncryptedFormat.Rnw'

--- re-building 'illuminaio.Rnw' using Sweave
Warning in readChar(con, nchars = n) :
  truncating string with embedded nuls
Warning in system(paste(shQuote(texi2dvi), if (quiet) "--quiet" else "",  :
  running command '"C:\PROGRA~1\MIKTEX~1.9\miktex\bin\x64\texify.exe" --quiet --pdf "illuminaio.tex" --max-iterations=20 -I "C:/Users/bioctesting/bbs-3.11-bioc-testing/R/share/texmf/tex/latex" -I "C:/Users/bioctesting/bbs-3.11-bioc-testing/R/share/texmf/bibtex/bst"' had status 1
Error: processing vignette 'illuminaio.Rnw' failed with diagnostics:
Failed to locate 'texi2pdf' output file 'illuminaio.pdf' for vignette with name 'illuminaio' and engine 'utils::Sweave'. The following files exist in working directory 'C:\Users\bioctesting\bbs-3.11-bioc-testing\tmpdir\RtmpkbcPAQ\Rbuild17e83e077673\illuminaio\vignettes': 'EncryptedFormat.R' (57 bytes), 'EncryptedFormat.Rnw' (5387 bytes), 'EncryptedFormat.tex' (5496 bytes), 'illuminaio-figureComparingValues.png' (38372 bytes), 'illuminaio.Rnw' (8217 bytes), 'illuminaio.bib' (397 bytes), 'illuminaio.tex' (11460 bytes)
--- failed re-building 'illuminaio.Rnw'

SUMMARY: processing the following files failed:
  'EncryptedFormat.Rnw' 'illuminaio.Rnw'

Error: Vignette re-building failed.
Execution halted