| Back to "Blame Jeroen" build/check report for BioC 3.11 |
This page was generated on 2020-04-15 03:20:10 -0400 (Wed, 15 Apr 2020).
| These builds are using Rtools40 and R-testing by Jeroen Ooms (available at https://cran.r-project.org/bin/windows/testing/rtools40.html) |
| TO THE DEVELOPERS/MAINTAINERS OF THE DelayedMatrixStats PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 27/89 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||
| DelayedMatrixStats 1.9.1 Peter Hickey
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | ERROR | skipped | skipped |
| Package: DelayedMatrixStats |
| Version: 1.9.1 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc-testing/src/contrib/DelayedMatrixStats_1.9.1.tar.gz && rm -rf DelayedMatrixStats.buildbin-libdir && mkdir DelayedMatrixStats.buildbin-libdir && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DelayedMatrixStats.buildbin-libdir DelayedMatrixStats_1.9.1.tar.gz && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL DelayedMatrixStats_1.9.1.zip && rm DelayedMatrixStats_1.9.1.tar.gz DelayedMatrixStats_1.9.1.zip |
| StartedAt: 2020-04-14 18:08:20 -0400 (Tue, 14 Apr 2020) |
| EndedAt: 2020-04-14 18:08:51 -0400 (Tue, 14 Apr 2020) |
| EllapsedTime: 31.2 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc-testing/src/contrib/DelayedMatrixStats_1.9.1.tar.gz && rm -rf DelayedMatrixStats.buildbin-libdir && mkdir DelayedMatrixStats.buildbin-libdir && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DelayedMatrixStats.buildbin-libdir DelayedMatrixStats_1.9.1.tar.gz && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL DelayedMatrixStats_1.9.1.zip && rm DelayedMatrixStats_1.9.1.tar.gz DelayedMatrixStats_1.9.1.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 53578 100 53578 0 0 723k 0 --:--:-- --:--:-- --:--:-- 792k
install for i386
* installing *source* package 'DelayedMatrixStats' ...
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'DelayedMatrixStats'
finding HTML links ... done
DelayedMatrixStats html
colAlls html
finding level-2 HTML links ... done
colAnyNAs html
colAvgsPerRowSet html
colCollapse html
Rd warning: C:/Users/bioctesting/bbs-3.11-bioc-testing/tmpdir/Rtmpis1ZjE/R.INSTALLc306ac92fd5/DelayedMatrixStats/man/colCollapse.Rd:94: file link '[' in package 'base' does not exist and so has been treated as a topic
colCounts html
colCummaxs html
Rd warning: C:/Users/bioctesting/bbs-3.11-bioc-testing/tmpdir/Rtmpis1ZjE/R.INSTALLc306ac92fd5/DelayedMatrixStats/man/colCummaxs.Rd:180: file link 'cumprod' in package 'base' does not exist and so has been treated as a topic
Rd warning: C:/Users/bioctesting/bbs-3.11-bioc-testing/tmpdir/Rtmpis1ZjE/R.INSTALLc306ac92fd5/DelayedMatrixStats/man/colCummaxs.Rd:181: file link 'cummin' in package 'base' does not exist and so has been treated as a topic
Rd warning: C:/Users/bioctesting/bbs-3.11-bioc-testing/tmpdir/Rtmpis1ZjE/R.INSTALLc306ac92fd5/DelayedMatrixStats/man/colCummaxs.Rd:181: file link 'cummax' in package 'base' does not exist and so has been treated as a topic
colDiffs html
colIQRDiffs html
Rd warning: C:/Users/bioctesting/bbs-3.11-bioc-testing/tmpdir/Rtmpis1ZjE/R.INSTALLc306ac92fd5/DelayedMatrixStats/man/colIQRDiffs.Rd:228: file link 'var' in package 'stats' does not exist and so has been treated as a topic
Rd warning: C:/Users/bioctesting/bbs-3.11-bioc-testing/tmpdir/Rtmpis1ZjE/R.INSTALLc306ac92fd5/DelayedMatrixStats/man/colIQRDiffs.Rd:283: file link 'var' in package 'stats' does not exist and so has been treated as a topic
colIQRs html
colLogSumExps html
colMads html
colMeans2 html
colMedians html
colOrderStats html
colProds html
Rd warning: C:/Users/bioctesting/bbs-3.11-bioc-testing/tmpdir/Rtmpis1ZjE/R.INSTALLc306ac92fd5/DelayedMatrixStats/man/colProds.Rd:92: file link 'product' in package 'matrixStats' does not exist and so has been treated as a topic
Rd warning: C:/Users/bioctesting/bbs-3.11-bioc-testing/tmpdir/Rtmpis1ZjE/R.INSTALLc306ac92fd5/DelayedMatrixStats/man/colProds.Rd:107: file link 'is.nan' in package 'base' does not exist and so has been treated as a topic
colQuantiles html
colRanks html
colSums2 html
colTabulates html
colVars html
colWeightedMads html
colWeightedMeans html
colWeightedMedians html
colWeightedVars html
Rd warning: C:/Users/bioctesting/bbs-3.11-bioc-testing/tmpdir/Rtmpis1ZjE/R.INSTALLc306ac92fd5/DelayedMatrixStats/man/colWeightedVars.Rd:138: file link 'var' in package 'stats' does not exist and so has been treated as a topic
from_DelayedArray_to_simple_seed_class
html
rowblock_APPLY html
seedClass html
subset_by_Nindex html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'DelayedMatrixStats' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'DelayedMatrixStats' as DelayedMatrixStats_1.9.1.zip
* DONE (DelayedMatrixStats)
* installing to library 'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library'
package 'DelayedMatrixStats' successfully unpacked and MD5 sums checked