To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BiocParallel")
In most cases, you don't need to download the package archive at all.
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This package is for version 3.1 of Bioconductor; for the stable, up-to-date release version, see BiocParallel.
Bioconductor version: 3.1
This package provides modified versions and novel implementation of functions for parallel evaluation, tailored to use with Bioconductor objects.
Author: Bioconductor Package Maintainer [cre], Martin Morgan [aut], Valerie Obenchain [aut], Michel Lang [aut], Ryan Thompson [aut]
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
Citation (from within R,
enter citation("BiocParallel")):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BiocParallel")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("BiocParallel")
| Errors, Logs and Debugging | ||
| R Script | Introduction to BiocParallel | |
| Reference Manual | ||
| Text | NEWS |
| biocViews | Infrastructure, Software |
| Version | 1.2.22 |
| In Bioconductor since | BioC 2.13 (R-3.0) (2.5 years) |
| License | GPL-2 | GPL-3 |
| Depends | methods |
| Imports | futile.logger, parallel, snow |
| LinkingTo | |
| Suggests | BiocGenerics, tools, foreach, BatchJobs, BBmisc, doParallel, Rmpi, GenomicRanges, RNAseqData.HNRNPC.bam.chr14, Rsamtools, GenomicAlignments, ShortRead, codetools, RUnit, BiocStyle, knitr |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | ClassifyR, CopywriteR, DEXSeq, GenomicFiles, hiReadsProcessor, InPAS, MBASED, metagene, MSnbase, pRoloc, Rqc, ShortRead, SigCheck |
| Imports Me | ChIPQC, cpvSNP, derfinder, DESeq2, easyRNASeq, EMDomics, flowcatchR, GenomicAlignments, gmapR, h5vc, HTSeqGenie, MethylAid, parglms, qpgraph, QuasR, RUVcorr, soGGi, synapter, TFBSTools, VariantFiltering, VariantTools |
| Suggests Me | ALDEx2, chimera, DEGreport, MethylAidData, oneChannelGUI, specL, systemPipeR |
| Build Report |
Follow Installation instructions to use this package in your R session.
| Package Source | BiocParallel_1.2.22.tar.gz |
| Windows Binary | BiocParallel_1.2.22.zip |
| Mac OS X 10.6 (Snow Leopard) | BiocParallel_1.2.22.tgz |
| Mac OS X 10.9 (Mavericks) | BiocParallel_1.2.22.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/BiocParallel/tree/release-3.1 |
| Package Short Url | http://bioconductor.org/packages/BiocParallel/ |
| Package Downloads Report | Download Stats |
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