Back to Multiple platform build/check report for BioC 3.23:   simplified   long
ABCDEFGHIJKLMNOPQ[R]STUVWXYZ

This page was generated on 2025-11-17 11:39 -0500 (Mon, 17 Nov 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.3 LTS)x86_64R Under development (unstable) (2025-10-20 r88955) -- "Unsuffered Consequences" 4826
lconwaymacOS 12.7.6 Montereyx86_64R Under development (unstable) (2025-10-21 r88958) -- "Unsuffered Consequences" 4491
kjohnson3macOS 13.7.7 Venturaarm64R Under development (unstable) (2025-11-04 r88984) -- "Unsuffered Consequences" 4562
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1777/2325HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
rigvf 1.3.1  (landing page)
Michael Love
Snapshot Date: 2025-11-16 13:40 -0500 (Sun, 16 Nov 2025)
git_url: https://git.bioconductor.org/packages/rigvf
git_branch: devel
git_last_commit: d491bcc
git_last_commit_date: 2025-11-13 10:53:32 -0500 (Thu, 13 Nov 2025)
nebbiolo1Linux (Ubuntu 24.04.3 LTS) / x86_64  OK    ERROR  skipped
lconwaymacOS 12.7.6 Monterey / x86_64  OK    ERROR  skippedskipped
kjohnson3macOS 13.7.7 Ventura / arm64  OK    ERROR  skippedskipped

BUILD results for rigvf on nebbiolo1

To the developers/maintainers of the rigvf package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/rigvf.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: rigvf
Version: 1.3.1
Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data rigvf
StartedAt: 2025-11-16 19:44:00 -0500 (Sun, 16 Nov 2025)
EndedAt: 2025-11-16 19:44:23 -0500 (Sun, 16 Nov 2025)
EllapsedTime: 23.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data rigvf
###
##############################################################################
##############################################################################


* checking for file ‘rigvf/DESCRIPTION’ ... OK
* preparing ‘rigvf’:
* checking DESCRIPTION meta-information ... OK
* installing the package (it is needed to build vignettes)
* creating vignettes ... ERROR
--- re-building ‘rigvf.Rmd’ using rmarkdown

Quitting from rigvf.Rmd:152-160 [unnamed-chunk-8]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! 'filter' is not an exported object from 'namespace:plyranges'
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'rigvf.Rmd' failed with diagnostics:
'filter' is not an exported object from 'namespace:plyranges'
--- failed re-building ‘rigvf.Rmd’

SUMMARY: processing the following file failed:
  ‘rigvf.Rmd’

Error: Vignette re-building failed.
Execution halted