| Back to Build/check report for BioC 3.23: simplified long |
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This page was generated on 2025-11-05 11:32 -0500 (Wed, 05 Nov 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2025-10-20 r88955) -- "Unsuffered Consequences" | 4818 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the VariantAnnotation package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/VariantAnnotation.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package 2267/2323 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| VariantAnnotation 1.57.0 (landing page) Bioconductor Package Maintainer
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | WARNINGS | |||||||||
| QUICK STATS | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||||||||
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 |
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| Package 1/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| alabaster.vcf 1.11.0 (landing page) Aaron Lun
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 2/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| AllelicImbalance 1.49.0 (landing page) Jesper R Gadin
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 3/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| APAlyzer 1.25.0 (landing page) Ruijia Wang
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | ERROR | ||||||||||||||
| Package 4/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| appreci8R 1.29.0 (landing page) Sarah Sandmann
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 5/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| BadRegionFinder 1.39.0 (landing page) Sarah Sandmann
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 6/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| BBCAnalyzer 1.41.0 (landing page) Sarah Sandmann
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 7/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| biovizBase 1.59.0 (landing page) Michael Lawrence
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | WARNINGS | ||||||||||||||
| Package 8/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| biscuiteer 1.25.0 (landing page) Jacob Morrison
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | WARNINGS | ||||||||||||||
| Package 9/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| cardelino 1.13.0 (landing page) Davis McCarthy
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 10/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| CCAFE 1.3.0 (landing page) Hayley Wolff
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 11/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| CNVfilteR 1.25.0 (landing page) Jose Marcos Moreno-Cabrera
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 12/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| CNVrd2 1.49.0 (landing page) Hoang Tan Nguyen
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 13/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| CopyNumberPlots 1.27.0 (landing page) Bernat Gel
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 14/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| crisprDesign 1.13.0 (landing page) Jean-Philippe Fortin
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 15/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| customProDB 1.51.0 (landing page) Xiaojing Wang
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | ERROR | ||||||||||||||
| Package 16/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| DAMEfinder 1.23.0 (landing page) Stephany Orjuela
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 17/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| decompTumor2Sig 2.27.0 (landing page) Rosario M. Piro
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 18/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| deepSNV 1.57.0 (landing page) Moritz Gerstung
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 19/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| demuxSNP 1.9.0 (landing page) Michael Lynch
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 20/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| DominoEffect 1.31.0 (landing page) Marija Buljan
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 21/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| fcScan 1.25.0 (landing page) Pierre Khoueiry
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 22/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| G4SNVHunter 1.3.0 (landing page) Rongxin Zhang
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | WARNINGS | ||||||||||||||
| Package 23/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| GA4GHclient 1.35.0 (landing page) Welliton Souza
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 24/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| GenomicFiles 1.47.0 (landing page) Bioconductor Package Maintainer
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 25/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| GenVisR 1.43.0 (landing page) Zachary Skidmore
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | ERROR | ||||||||||||||
| Package 26/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| ggbio 1.59.0 (landing page) Michael Lawrence
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | WARNINGS | ||||||||||||||
| Package 27/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| gmapR 1.53.0 (landing page) Michael Lawrence
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | ERROR | skipped | ||||||||||||||
| Package 28/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| gwascat 2.43.0 (landing page) VJ Carey
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 29/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| gwasurvivr 1.29.0 (landing page) Abbas Rizvi
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 30/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| HelloRanges 1.37.0 (landing page) Michael Lawrence
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 31/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| icetea 1.29.0 (landing page) Vivek Bhardwaj
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | WARNINGS | ||||||||||||||
| Package 32/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| igvR 1.31.0 (landing page) Arkadiusz Gladki
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 33/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| karyoploteR 1.37.0 (landing page) Bernat Gel
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 34/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| katdetectr 1.13.0 (landing page) Daan Hazelaar
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 35/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| lineagespot 1.15.0 (landing page) Nikolaos Pechlivanis
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 36/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| motifbreakR 2.25.0 (landing page) Simon Gert Coetzee
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | ERROR | skipped | ||||||||||||||
| Package 37/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| MungeSumstats 1.19.0 (landing page) Alan Murphy
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 38/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| musicatk 2.5.0 (landing page) Joshua D. Campbell
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 39/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| MutationalPatterns 3.21.0 (landing page) Mark van Roosmalen
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | ERROR | ||||||||||||||
| Package 40/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| myvariant 1.41.0 (landing page) Adam Mark, Chunlei Wu
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | ERROR | skipped | ||||||||||||||
| Package 41/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| ProteoDisco 1.17.0 (landing page) Job van Riet
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | WARNINGS | ||||||||||||||
| Package 42/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| PureCN 2.17.0 (landing page) Markus Riester
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 43/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| R453Plus1Toolbox 1.61.0 (landing page) Hans-Ulrich Klein
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | ERROR | skipped | ||||||||||||||
| Package 44/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| RAIDS 1.9.0 (landing page) Pascal Belleau
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 45/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| RareVariantVis 2.39.0 (landing page) Tomasz Stokowy
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 46/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| scoreInvHap 1.33.0 (landing page) Dolors Pelegri-Siso
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 47/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| seqCAT 1.33.0 (landing page) Erik Fasterius
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 48/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| signeR 2.13.0 (landing page) Renan Valieris
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 49/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| SigsPack 1.25.0 (landing page) Franziska Schumann
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 50/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| SNPhood 1.41.0 (landing page) Christian Arnold
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 51/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| SomaticSignatures 2.47.0 (landing page) Julian Gehring
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 52/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| StructuralVariantAnnotation 1.27.0 (landing page) Daniel Cameron
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 53/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| svaNUMT 1.17.0 (landing page) Ruining Dong
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 54/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| svaRetro 1.17.0 (landing page) Ruining Dong
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | ERROR | skipped | ||||||||||||||
| Package 55/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| tadar 1.9.0 (landing page) Lachlan Baer
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 56/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| tLOH 1.19.0 (landing page) Michelle Webb
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 57/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| transmogR 1.7.0 (landing page) Stevie Pederson
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 58/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| TVTB 1.37.0 (landing page) Kevin Rue-Albrecht
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 59/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| Uniquorn 2.31.0 (landing page) Raik Otto
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 60/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| UPDhmm 1.7.0 (landing page) Marta Sevilla
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 61/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| VariantFiltering 1.47.0 (landing page) Robert Castelo
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 62/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| VariantTools 1.53.0 (landing page) Michael Lawrence
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | ERROR | skipped | ||||||||||||||
| Package 63/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| VCFArray 1.27.0 (landing page) Qian Liu
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 64/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| YAPSA 1.37.0 (landing page) Zuguang Gu
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||
| Package 65/65 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||||||||
| ZygosityPredictor 1.11.0 (landing page) Marco Rheinnecker
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||||||||