Multiple platform build/check report for BioC 3.23 - INSTALL results for ProteoDisco on kunpeng2

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 24.04.4 LTS)	x86_64	4.6.0 alpha (2026-04-05 r89794)	4957
kjohnson3	macOS 13.7.7 Ventura	arm64	4.6.0 alpha (2026-04-08 r89818)	4686
kunpeng2	Linux (openEuler 24.03 LTS)	aarch64	R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences"	4627
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

INSTALL results for ProteoDisco on kunpeng2

To the developers/maintainers of the ProteoDisco package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ProteoDisco.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.
- See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host.

raw results

Summary

Package: ProteoDisco

Version: 1.17.0

Command: /home/biocbuild/R/R/bin/R CMD INSTALL ProteoDisco

StartedAt: 2026-04-16 21:01:17 -0000 (Thu, 16 Apr 2026)

EndedAt: 2026-04-16 21:01:31 -0000 (Thu, 16 Apr 2026)

EllapsedTime: 13.9 seconds

RetCode: 1

Status: ERROR

Command output

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### Running command:
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###   /home/biocbuild/R/R/bin/R CMD INSTALL ProteoDisco
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* installing to library ‘/home/biocbuild/R/R-devel_2025-02-19/site-library’
* installing *source* package ‘ProteoDisco’ ...
** this is package ‘ProteoDisco’ version ‘1.17.0’
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import ‘dplyr::rename’ by ‘plyr::rename’ when loading ‘ProteoDisco’
Warning: replacing previous import ‘dplyr::count’ by ‘plyr::count’ when loading ‘ProteoDisco’
Warning: replacing previous import ‘dplyr::failwith’ by ‘plyr::failwith’ when loading ‘ProteoDisco’
Warning: replacing previous import ‘dplyr::id’ by ‘plyr::id’ when loading ‘ProteoDisco’
Warning: replacing previous import ‘dplyr::summarize’ by ‘plyr::summarize’ when loading ‘ProteoDisco’
Warning: replacing previous import ‘dplyr::summarise’ by ‘plyr::summarise’ when loading ‘ProteoDisco’
Warning: replacing previous import ‘dplyr::mutate’ by ‘plyr::mutate’ when loading ‘ProteoDisco’
Warning: replacing previous import ‘dplyr::desc’ by ‘plyr::desc’ when loading ‘ProteoDisco’
Warning: replacing previous import ‘dplyr::arrange’ by ‘plyr::arrange’ when loading ‘ProteoDisco’
Error: package or namespace load failed for ‘GenomicFeatures’:
 class "Seqinfo" is not exported by 'namespace:GenomeInfoDb'
Error: package or namespace load failed for ‘Rsamtools’:
 class "Seqinfo" is not exported by 'namespace:GenomeInfoDb'
Failed with error:  ‘package ‘Rsamtools’ could not be loaded’
Error: package or namespace load failed for ‘rtracklayer’:
 class "Seqinfo" is not exported by 'namespace:GenomeInfoDb'
Failed with error:  ‘package ‘rtracklayer’ could not be loaded’
Error in setClassUnion("DNAStringSet_OR_BSgenome", c("DNAStringSet", "BSgenome")) : 
  the member classes must be defined: not true of "BSgenome"
Error: unable to load R code in package ‘ProteoDisco’
Execution halted
ERROR: lazy loading failed for package ‘ProteoDisco’
* removing ‘/home/biocbuild/R/R-devel_2025-02-19/site-library/ProteoDisco’
* restoring previous ‘/home/biocbuild/R/R-devel_2025-02-19/site-library/ProteoDisco’