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This page was generated on 2025-10-27 12:45 -0400 (Mon, 27 Oct 2025).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson3macOS 13.7.7 Venturaarm644.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" 4637
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 623/2361HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DOtools 0.99.11  (landing page)
Mariano Ruz Jurado
Snapshot Date: 2025-10-26 13:45 -0400 (Sun, 26 Oct 2025)
git_url: https://git.bioconductor.org/packages/DOtools
git_branch: devel
git_last_commit: 95e75ee
git_last_commit_date: 2025-10-09 05:46:33 -0400 (Thu, 09 Oct 2025)
kjohnson3macOS 13.7.7 Ventura / arm64  OK    ERROR  skippedskipped

BUILD results for DOtools on kjohnson3

To the developers/maintainers of the DOtools package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/DOtools.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: DOtools
Version: 0.99.11
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data DOtools
StartedAt: 2025-10-26 16:18:40 -0400 (Sun, 26 Oct 2025)
EndedAt: 2025-10-26 16:19:32 -0400 (Sun, 26 Oct 2025)
EllapsedTime: 52.5 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data DOtools
###
##############################################################################
##############################################################################


* checking for file ‘DOtools/DESCRIPTION’ ... OK
* preparing ‘DOtools’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘DOtools.Rmd’ using rmarkdown

Quitting from DOtools.Rmd:68-81 [load_library]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! package or namespace load failed for 'enrichR':
 .onAttach failed in attachNamespace() for 'enrichR', details:
  call: curl::curl_fetch_memory(url, handle = handle)
  error: Timeout was reached [maayanlab.cloud]:
Resolving timed out after 10002 milliseconds
---
Backtrace:
    ▆
 1. └─base::library(enrichR)
 2.   └─base::tryCatch(...)
 3.     └─base (local) tryCatchList(expr, classes, parentenv, handlers)
 4.       └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
 5.         └─value[[3L]](cond)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'DOtools.Rmd' failed with diagnostics:
package or namespace load failed for 'enrichR':
 .onAttach failed in attachNamespace() for 'enrichR', details:
  call: curl::curl_fetch_memory(url, handle = handle)
  error: Timeout was reached [maayanlab.cloud]:
Resolving timed out after 10002 milliseconds
--- failed re-building ‘DOtools.Rmd’

SUMMARY: processing the following file failed:
  ‘DOtools.Rmd’

Error: Vignette re-building failed.
Execution halted