| Back to Multiple platform build/check report for BioC 3.22: simplified long |
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This page was generated on 2025-09-17 12:03 -0400 (Wed, 17 Sep 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" | 4764 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4586 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4529 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4554 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 237/2330 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| BOBaFIT 1.13.0 (landing page) Gaia Mazzocchetti
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | ERROR | skipped | skipped | |||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | ERROR | skipped | skipped | |||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | ERROR | skipped | ||||||||||
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To the developers/maintainers of the BOBaFIT package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/BOBaFIT.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: BOBaFIT |
| Version: 1.13.0 |
| Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 BOBaFIT |
| StartedAt: 2025-09-16 16:29:05 -0400 (Tue, 16 Sep 2025) |
| EndedAt: 2025-09-16 16:30:21 -0400 (Tue, 16 Sep 2025) |
| EllapsedTime: 76.1 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 BOBaFIT ### ############################################################################## ############################################################################## * checking for file ‘BOBaFIT/DESCRIPTION’ ... OK * preparing ‘BOBaFIT’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘BOBaFIT.Rmd’ using rmarkdown Quitting from BOBaFIT.Rmd:149-155 [DRrefit_plot 1] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NULL ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'BOBaFIT.Rmd' failed with diagnostics: The `facets` argument of `facet_grid()` was deprecated in ggplot2 2.2.0 and is now defunct. ℹ Please use the `rows` argument instead. --- failed re-building ‘BOBaFIT.Rmd’ --- re-building ‘Data-Preparation.Rmd’ using rmarkdown --- finished re-building ‘Data-Preparation.Rmd’ SUMMARY: processing the following file failed: ‘BOBaFIT.Rmd’ Error: Vignette re-building failed. Execution halted