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This page was generated on 2026-04-22 11:57 -0400 (Wed, 22 Apr 2026).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.4 LTS)x86_644.6.0 RC (2026-04-17 r89917) -- "Because it was There" 4796
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 917/2351HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
graper 1.27.0  (landing page)
Britta Velten
Snapshot Date: 2026-04-21 14:59 -0400 (Tue, 21 Apr 2026)
git_url: https://git.bioconductor.org/packages/graper
git_branch: devel
git_last_commit: 95474d7
git_last_commit_date: 2025-10-29 10:49:21 -0400 (Wed, 29 Oct 2025)
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
See other builds for graper in R Universe.

CHECK results for graper on nebbiolo2

To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: graper
Version: 1.27.0
Command: /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.24-bioc/R/site-library --timings graper_1.27.0.tar.gz
StartedAt: 2026-04-22 00:54:37 -0400 (Wed, 22 Apr 2026)
EndedAt: 2026-04-22 00:56:13 -0400 (Wed, 22 Apr 2026)
EllapsedTime: 96.1 seconds
RetCode: 0
Status:   OK  
CheckDir: graper.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.24-bioc/R/site-library --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.24-bioc/meat/graper.Rcheck’
* using R version 4.6.0 RC (2026-04-17 r89917)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
    GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
* running under: Ubuntu 24.04.4 LTS
* using session charset: UTF-8
* current time: 2026-04-22 04:54:37 UTC
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’
* checking installed package size ... INFO
  installed size is  6.2Mb
  sub-directories of 1Mb or more:
    libs   6.0Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  ‘/home/biocbuild/bbs-3.24-bioc/meat/graper.Rcheck/00check.log’
for details.

Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.24-bioc/R/site-library’
* installing *source* package ‘graper’ ...
** this is package ‘graper’ version ‘1.27.0’
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’
g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.24-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/BH/include' -I/usr/local/include    -fpic  -g -O2  -Wall -Werror=format-security  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.24-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/BH/include' -I/usr/local/include    -fpic  -g -O2  -Wall -Werror=format-security  -c fit_graper.cpp -o fit_graper.o
g++ -std=gnu++20 -shared -L/home/biocbuild/bbs-3.24-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.24-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.24-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.24-bioc/R/site-library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R version 4.6.0 RC (2026-04-17 r89917) -- "Because it was There"
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-892.433
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-569.178
ELB improved by 323.255

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-510.721
ELB improved by 58.4571

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-478.559
ELB improved by 32.1619

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.533
ELB improved by 12.026

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.517
ELB improved by 5.01573

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.34
ELB improved by 3.17694

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.685
ELB improved by 2.65541

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.184
ELB improved by 2.50125

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.715
ELB improved by 2.46834

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.25
ELB improved by 2.46518

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.828
ELB improved by 2.42219

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.551
ELB improved by 2.27725

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.55
ELB improved by 2.0011

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.923
ELB improved by 1.6267

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.688
ELB improved by 1.23502

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.787
ELB improved by 0.901016

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.131
ELB improved by 0.655663

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.64
ELB improved by 0.491023

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.256
ELB improved by 0.384379

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.941
ELB improved by 0.314804

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.673
ELB improved by 0.267937

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.438
ELB improved by 0.23507

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.227
ELB improved by 0.21114

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.034
ELB improved by 0.1932

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.854
ELB improved by 0.179483

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.685
ELB improved by 0.168888

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.525
ELB improved by 0.160695

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.37
ELB improved by 0.154409

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.22
ELB improved by 0.149671

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.074
ELB improved by 0.146202

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.931
ELB improved by 0.143775

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.788
ELB improved by 0.142195

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.647
ELB improved by 0.141285

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.506
ELB improved by 0.14088

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.365
ELB improved by 0.140826

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.224
ELB improved by 0.140979

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.083
ELB improved by 0.14121

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.942
ELB improved by 0.141409

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.8
ELB improved by 0.141491

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.659
ELB improved by 0.141407

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.518
ELB improved by 0.141148

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.377
ELB improved by 0.140752

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.237
ELB improved by 0.140308

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.097
ELB improved by 0.139952

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.957
ELB improved by 0.139857

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.817
ELB improved by 0.140209

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.675
ELB improved by 0.141154

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.533
ELB improved by 0.142707

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.388
ELB improved by 0.144642

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.242
ELB improved by 0.146419

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.094
ELB improved by 0.147294

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.948
ELB improved by 0.146664

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.803
ELB improved by 0.144454

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.662
ELB improved by 0.141155

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.525
ELB improved by 0.137479

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.391
ELB improved by 0.133997

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.26
ELB improved by 0.131024

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.131
ELB improved by 0.128677

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.004
ELB improved by 0.126979

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.878
ELB improved by 0.125925

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.752
ELB improved by 0.125539

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.627
ELB improved by 0.12592

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.499
ELB improved by 0.127333

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.369
ELB improved by 0.130378

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.232
ELB improved by 0.136399

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.084
ELB improved by 0.148487

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.91
ELB improved by 0.174071

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.679
ELB improved by 0.230793

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.328
ELB improved by 0.350733

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.794
ELB improved by 0.534469

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.143
ELB improved by 0.650547

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.526
ELB improved by 0.617821

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.986
ELB improved by 0.539432

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.515
ELB improved by 0.471421

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.101
ELB improved by 0.413738

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.738
ELB improved by 0.362518

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.421
ELB improved by 0.317529

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.14
ELB improved by 0.281203

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.88
ELB improved by 0.259792

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.611
ELB improved by 0.268469

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.275
ELB improved by 0.336878

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.805
ELB improved by 0.469549

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.26
ELB improved by 0.545238

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.76
ELB improved by 0.499836

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.331
ELB improved by 0.428468

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.943
ELB improved by 0.388748

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.574
ELB improved by 0.36823

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.24
ELB improved by 0.334432

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.937
ELB improved by 0.302599

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.65
ELB improved by 0.287562

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.361
ELB improved by 0.289184

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.057
ELB improved by 0.303667

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.749
ELB improved by 0.308095

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.481
ELB improved by 0.26759

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.287
ELB improved by 0.194861

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.157
ELB improved by 0.129742

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.072
ELB improved by 0.0849563

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.015
ELB improved by 0.0563229

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.977
ELB improved by 0.0385441

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.949
ELB improved by 0.0278754

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.927
ELB improved by 0.0217647

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.909
ELB improved by 0.0185098

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.892
ELB improved by 0.0169937

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.875
ELB improved by 0.0164562

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.859
ELB improved by 0.0163318

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.843
ELB improved by 0.0161779

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.827
ELB improved by 0.0156882

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.812
ELB improved by 0.0147375

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.799
ELB improved by 0.013388

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.787
ELB improved by 0.0118249

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.777
ELB improved by 0.0102549

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.768
ELB improved by 0.00883135

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-881.467
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-581.375
ELB improved by 300.093

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-520.963
ELB improved by 60.4119

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-478.996
ELB improved by 41.967

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.875
ELB improved by 17.1211

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.189
ELB improved by 6.68596

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.084
ELB improved by 4.10495

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.788
ELB improved by 3.29563

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.759
ELB improved by 3.02941

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.811
ELB improved by 2.94755

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.906
ELB improved by 2.90542

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.085
ELB improved by 2.82115

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.439
ELB improved by 2.64595

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.08
ELB improved by 2.35868

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.133
ELB improved by 1.94682

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.667
ELB improved by 1.46594

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.625
ELB improved by 1.04253

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.88
ELB improved by 0.744717

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.31
ELB improved by 0.570208

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.814
ELB improved by 0.495573

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.321
ELB improved by 0.493395

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.816
ELB improved by 0.504916

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.373
ELB improved by 0.443172

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.049
ELB improved by 0.32325

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.822
ELB improved by 0.227961

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.646
ELB improved by 0.175198

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.498
ELB improved by 0.148456

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.363
ELB improved by 0.134515

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.237
ELB improved by 0.126855

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.114
ELB improved by 0.12258

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.994
ELB improved by 0.1204

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.874
ELB improved by 0.119713

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.754
ELB improved by 0.120225

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.632
ELB improved by 0.121786

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.507
ELB improved by 0.124321

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.38
ELB improved by 0.127798

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.247
ELB improved by 0.13221

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.11
ELB improved by 0.137563

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.966
ELB improved by 0.143871

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.815
ELB improved by 0.151151

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.655
ELB improved by 0.159422

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.487
ELB improved by 0.168713

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.308
ELB improved by 0.179089

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.117
ELB improved by 0.190675

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.913
ELB improved by 0.203702

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.695
ELB improved by 0.218538

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.459
ELB improved by 0.235717

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.203
ELB improved by 0.255933

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.923
ELB improved by 0.280016

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.614
ELB improved by 0.308859

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.271
ELB improved by 0.343278

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.887
ELB improved by 0.383781

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.457
ELB improved by 0.430195

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.976
ELB improved by 0.481146

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.442
ELB improved by 0.533469

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.861
ELB improved by 0.581818

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.242
ELB improved by 0.618888

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.605
ELB improved by 0.636729

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.976
ELB improved by 0.629175

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.381
ELB improved by 0.594601

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.844
ELB improved by 0.537431

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.377
ELB improved by 0.467004

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.983
ELB improved by 0.394091

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.655
ELB improved by 0.327227

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.384
ELB improved by 0.270932

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.158
ELB improved by 0.22608

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.967
ELB improved by 0.191334

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.802
ELB improved by 0.164619

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.658
ELB improved by 0.144128

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.53
ELB improved by 0.128729

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.412
ELB improved by 0.117742

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.302
ELB improved by 0.110189

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.198
ELB improved by 0.103953

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.102
ELB improved by 0.0959596

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.017
ELB improved by 0.0842734

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.947
ELB improved by 0.0700484

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.891
ELB improved by 0.0562238

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.846
ELB improved by 0.044778

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.81
ELB improved by 0.0360137

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.781
ELB improved by 0.0294203

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.757
ELB improved by 0.0244093

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.736
ELB improved by 0.0205412

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.719
ELB improved by 0.0175157

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.703
ELB improved by 0.0151219

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.69
ELB improved by 0.0132053

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.679
ELB improved by 0.0116511

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.668
ELB improved by 0.0103744

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.659
ELB improved by 0.00931322

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-841.796
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-581.477
ELB improved by 260.319

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-520.173
ELB improved by 61.3041

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-475.101
ELB improved by 45.0713

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.329
ELB improved by 20.7727

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.247
ELB improved by 7.08184

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.092
ELB improved by 3.15488

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.866
ELB improved by 2.22642

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.986
ELB improved by 1.87987

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.286
ELB improved by 1.69991

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.703
ELB improved by 1.58328

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.202
ELB improved by 1.50014

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.758
ELB improved by 1.44406

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.341
ELB improved by 1.41702

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.917
ELB improved by 1.42431

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.446
ELB improved by 1.47128

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.887
ELB improved by 1.55866

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.213
ELB improved by 1.67383

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.433
ELB improved by 1.78065

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.611
ELB improved by 1.82194

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.86
ELB improved by 1.75033

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.288
ELB improved by 1.5726

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.932
ELB improved by 1.35606

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.756
ELB improved by 1.17624

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.691
ELB improved by 1.06436

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.685
ELB improved by 1.00646

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.713
ELB improved by 0.971898

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.777
ELB improved by 0.935338

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.893
ELB improved by 0.884791

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.072
ELB improved by 0.820728

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.321
ELB improved by 0.750592

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.639
ELB improved by 0.682811

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.015
ELB improved by 0.62337

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.44
ELB improved by 0.575308

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.9
ELB improved by 0.53981

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.382
ELB improved by 0.51758

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.873
ELB improved by 0.509934

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.353
ELB improved by 0.519368

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.804
ELB improved by 0.549192

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.202
ELB improved by 0.601564

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.533
ELB improved by 0.669494

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.821
ELB improved by 0.71144

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.156
ELB improved by 0.665559

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.605
ELB improved by 0.550591

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.176
ELB improved by 0.429487

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.847
ELB improved by 0.328415

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.597
ELB improved by 0.250242

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.405
ELB improved by 0.192123

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.255
ELB improved by 0.149996

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.135
ELB improved by 0.119816

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.037
ELB improved by 0.0981516

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.955
ELB improved by 0.0824256

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.884
ELB improved by 0.0708609

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.821
ELB improved by 0.0623074

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.765
ELB improved by 0.0560835

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.714
ELB improved by 0.0518626

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.664
ELB improved by 0.0495578

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.615
ELB improved by 0.0491554

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.564
ELB improved by 0.0504904

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.511
ELB improved by 0.0530026

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.456
ELB improved by 0.0555976

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.399
ELB improved by 0.0568251

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.343
ELB improved by 0.0554825

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.292
ELB improved by 0.0512885

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.247
ELB improved by 0.0450053

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.209
ELB improved by 0.0379034

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.178
ELB improved by 0.0311033

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.153
ELB improved by 0.0252559

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.132
ELB improved by 0.0205665

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.115
ELB improved by 0.0169624

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.101
ELB improved by 0.0142518

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.089
ELB improved by 0.012224

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.078
ELB improved by 0.0106961

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.069
ELB improved by 0.00952615

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-878.137
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-595.244
ELB improved by 282.893

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-533.914
ELB improved by 61.3301

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-487.771
ELB improved by 46.1426

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.52
ELB improved by 23.2511

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.369
ELB improved by 10.1512

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.551
ELB improved by 5.818

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.873
ELB improved by 4.67813

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.371
ELB improved by 4.50209

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.709
ELB improved by 4.66207

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.963
ELB improved by 4.74565

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.573
ELB improved by 4.38981

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.047
ELB improved by 3.52589

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.539
ELB improved by 2.50814

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.845
ELB improved by 1.69382

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.69
ELB improved by 1.15488

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.878
ELB improved by 0.812052

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.287
ELB improved by 0.591604

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.837
ELB improved by 0.450004

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.478
ELB improved by 0.358677

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.18
ELB improved by 0.298201

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.923
ELB improved by 0.256535

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.697
ELB improved by 0.226756

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.492
ELB improved by 0.204999

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.302
ELB improved by 0.189136

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.124
ELB improved by 0.178072

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.953
ELB improved by 0.171399

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.784
ELB improved by 0.16922

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.612
ELB improved by 0.17193

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.432
ELB improved by 0.179633

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.241
ELB improved by 0.190911

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.04
ELB improved by 0.201724

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.833
ELB improved by 0.206932

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.628
ELB improved by 0.204438

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.432
ELB improved by 0.196266

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.247
ELB improved by 0.185295

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.073
ELB improved by 0.173159

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.913
ELB improved by 0.160568

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.765
ELB improved by 0.147951

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.629
ELB improved by 0.135666

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.505
ELB improved by 0.123999

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.392
ELB improved by 0.113146

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.289
ELB improved by 0.103216

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.195
ELB improved by 0.0942464

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.108
ELB improved by 0.0862263

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.029
ELB improved by 0.0791144

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.956
ELB improved by 0.0728563

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.889
ELB improved by 0.0673952

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.826
ELB improved by 0.0626813

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.768
ELB improved by 0.0586783

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.712
ELB improved by 0.0553693

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.66
ELB improved by 0.0527643

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.609
ELB improved by 0.0509087

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.559
ELB improved by 0.0498944

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.509
ELB improved by 0.0498716

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.458
ELB improved by 0.0510521

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.404
ELB improved by 0.0536825

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.346
ELB improved by 0.0579379

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.283
ELB improved by 0.0636757

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.213
ELB improved by 0.0700863

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.137
ELB improved by 0.0755844

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.058
ELB improved by 0.078482

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.98
ELB improved by 0.0781959

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.905
ELB improved by 0.0755978

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.833
ELB improved by 0.0720535

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.764
ELB improved by 0.0684847

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.699
ELB improved by 0.065251

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.636
ELB improved by 0.0624199

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.576
ELB improved by 0.0599708

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.519
ELB improved by 0.0578712

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.462
ELB improved by 0.056093

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.408
ELB improved by 0.0546115

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.354
ELB improved by 0.0534041

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.302
ELB improved by 0.0524494

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.25
ELB improved by 0.0517289

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.199
ELB improved by 0.0512274

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.148
ELB improved by 0.0509362

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.097
ELB improved by 0.0508554

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.046
ELB improved by 0.0509988

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.995
ELB improved by 0.0514012

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.943
ELB improved by 0.0521303

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.889
ELB improved by 0.0533103

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.834
ELB improved by 0.0551644

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.776
ELB improved by 0.0581033

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.713
ELB improved by 0.0629116

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.642
ELB improved by 0.071156

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.556
ELB improved by 0.0860505

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.442
ELB improved by 0.113896

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.278
ELB improved by 0.163761

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.045
ELB improved by 0.233151

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.767
ELB improved by 0.277771

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.51
ELB improved by 0.257229

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.301
ELB improved by 0.209066

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.13
ELB improved by 0.171345

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.982
ELB improved by 0.148038

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.847
ELB improved by 0.134703

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.719
ELB improved by 0.127701

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.595
ELB improved by 0.124228

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.473
ELB improved by 0.121713

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.356
ELB improved by 0.117835

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.245
ELB improved by 0.111027

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.144
ELB improved by 0.101014

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.055
ELB improved by 0.0888069

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.979
ELB improved by 0.0760229

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.915
ELB improved by 0.0640423

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.861
ELB improved by 0.0535907

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.816
ELB improved by 0.0448039

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.779
ELB improved by 0.0374924

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.747
ELB improved by 0.0313733

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.721
ELB improved by 0.0261989

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.699
ELB improved by 0.0217997

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.681
ELB improved by 0.0180747

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.666
ELB improved by 0.0149602

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.654
ELB improved by 0.0124021

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.644
ELB improved by 0.0103407

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.635
ELB improved by 0.00870884

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  2.390   0.165   2.543

Example timings

graper.Rcheck/graper-Ex.timings

nameusersystemelapsed
coef.graper0.0540.0020.057
getPIPs0.0710.0230.095
graper0.0810.0040.085
makeExampleData0.0100.0010.011
makeExampleDataWithUnequalGroups0.0120.0000.011
plotELBO0.2820.0240.307
plotGroupPenalties0.9090.0010.912
plotPosterior0.6310.0040.636
predict.graper2.0620.0132.075
print.graper0.0480.0040.052