| Back to Build/check report for BioC 3.24: simplified long |
|
This page was generated on 2026-04-22 11:57 -0400 (Wed, 22 Apr 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.4 LTS) | x86_64 | 4.6.0 RC (2026-04-17 r89917) -- "Because it was There" | 4796 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 101/2351 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| arrayQualityMetrics 3.67.3 (landing page) Hugo Gruson
| nebbiolo2 | Linux (Ubuntu 24.04.4 LTS) / x86_64 | OK | OK | ERROR | |||||||||
| See other builds for arrayQualityMetrics in R Universe. | ||||||||||||||
|
To the developers/maintainers of the arrayQualityMetrics package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/arrayQualityMetrics.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: arrayQualityMetrics |
| Version: 3.67.3 |
| Command: /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD check --install=check:arrayQualityMetrics.install-out.txt --library=/home/biocbuild/bbs-3.24-bioc/R/site-library --timings arrayQualityMetrics_3.67.3.tar.gz |
| StartedAt: 2026-04-21 21:54:37 -0400 (Tue, 21 Apr 2026) |
| EndedAt: 2026-04-21 21:54:42 -0400 (Tue, 21 Apr 2026) |
| EllapsedTime: 5.0 seconds |
| RetCode: 1 |
| Status: ERROR |
| CheckDir: arrayQualityMetrics.Rcheck |
| Warnings: NA |
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### Running command:
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### /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD check --install=check:arrayQualityMetrics.install-out.txt --library=/home/biocbuild/bbs-3.24-bioc/R/site-library --timings arrayQualityMetrics_3.67.3.tar.gz
###
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* using log directory ‘/home/biocbuild/bbs-3.24-bioc/meat/arrayQualityMetrics.Rcheck’
* using R version 4.6.0 RC (2026-04-17 r89917)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
* running under: Ubuntu 24.04.4 LTS
* using session charset: UTF-8
* current time: 2026-04-22 01:54:37 UTC
* checking for file ‘arrayQualityMetrics/DESCRIPTION’ ... OK
* this is package ‘arrayQualityMetrics’ version ‘3.67.3’
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Namespace dependency missing from DESCRIPTION Imports/Depends entries: ‘XML’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
See
‘/home/biocbuild/bbs-3.24-bioc/meat/arrayQualityMetrics.Rcheck/00check.log’
for details.