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This page was generated on 2026-04-22 11:57 -0400 (Wed, 22 Apr 2026).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.4 LTS)x86_644.6.0 RC (2026-04-17 r89917) -- "Because it was There" 4796
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

All results for package ShortRead


To the developers/maintainers of the ShortRead package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ShortRead.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Package 1993/2351HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ShortRead 1.69.4  (landing page)
Bioconductor Package Maintainer
Snapshot Date: 2026-04-21 14:59 -0400 (Tue, 21 Apr 2026)
git_url: https://git.bioconductor.org/packages/ShortRead
git_branch: devel
git_last_commit: 43f8fc8
git_last_commit_date: 2026-04-16 13:25:27 -0400 (Thu, 16 Apr 2026)
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
See other builds for ShortRead in R Universe.


Results for Bioconductor software packages that depend directly on package ShortRead

QUICK STATSOS / ArchINSTALLBUILDCHECKBUILD BIN
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64
0027
0126
00620
Package 1/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
amplican 1.33.7  (landing page)
Eivind Valen
git_last_commit: b983282
git_last_commit_date: 2026-04-14 04:45:57 -0400
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
See other builds for amplican in R Universe.
Package 2/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BEAT 1.49.0  (landing page)
Kemal Akman
git_last_commit: 3a301bb
git_last_commit_date: 2025-10-29 10:17:47 -0400
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
See other builds for BEAT in R Universe.
Package 3/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CellBarcode 1.17.0  (landing page)
Wenjie Sun
git_last_commit: bc09e4a
git_last_commit_date: 2025-10-29 11:13:43 -0400
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
See other builds for CellBarcode in R Universe.
Package 4/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
chipseq 1.61.0  (landing page)
Bioconductor Package Maintainer
git_last_commit: f81d061
git_last_commit_date: 2025-10-29 10:02:59 -0400
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
See other builds for chipseq in R Universe.
Package 5/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ChIPseqR 1.65.0  (landing page)
Peter Humburg
git_last_commit: 7948588
git_last_commit_date: 2025-10-29 10:03:52 -0400
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
See other builds for ChIPseqR in R Universe.
Package 6/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ChIPsim 1.65.0  (landing page)
Peter Humburg
git_last_commit: 5fed093
git_last_commit_date: 2025-10-29 10:03:24 -0400
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
See other builds for ChIPsim in R Universe.
Package 7/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CircSeqAlignTk 1.13.0  (landing page)
Jianqiang Sun
git_last_commit: 4415fca
git_last_commit_date: 2025-10-29 11:19:05 -0400
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    OK  NO, package depends on 'Rhisat2' which is not available
See other builds for CircSeqAlignTk in R Universe.
Package 8/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
dada2 1.39.0  (landing page)
Benjamin Callahan
git_last_commit: 29f93c2
git_last_commit_date: 2025-10-29 10:30:17 -0400
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
See other builds for dada2 in R Universe.
Package 9/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
easyRNASeq 2.47.0  (landing page)
Nicolas Delhomme
git_last_commit: 1cb9a73
git_last_commit_date: 2025-10-29 10:10:00 -0400
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
See other builds for easyRNASeq in R Universe.
Package 10/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
EDASeq 2.45.0  (landing page)
Davide Risso
git_last_commit: 1f147bc
git_last_commit_date: 2025-10-29 10:08:53 -0400
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
See other builds for EDASeq in R Universe.
Package 11/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
esATAC 1.33.1  (landing page)
Zheng Wei
git_last_commit: f884d0f
git_last_commit_date: 2026-03-22 02:26:00 -0400
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
See other builds for esATAC in R Universe.
Package 12/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
FastqCleaner 1.29.0  (landing page)
Leandro Roser
git_last_commit: 464323c
git_last_commit_date: 2025-10-29 10:45:40 -0400
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
See other builds for FastqCleaner in R Universe.
Package 13/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
FLAMES 2.5.5  (landing page)
Changqing Wang
git_last_commit: 445c76f
git_last_commit_date: 2026-04-14 09:33:40 -0400
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    ERROR  skipped
See other builds for FLAMES in R Universe.
Package 14/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
fraq 0.99.2  (landing page)
Travers Ching
git_last_commit: d2f1ab3
git_last_commit_date: 2026-02-12 21:25:53 -0400
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
See other builds for fraq in R Universe.
Package 15/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GOTHiC 1.47.0  (landing page)
Borbala Mifsud
git_last_commit: 7af2557
git_last_commit_date: 2025-10-29 10:52:56 -0400
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
See other builds for GOTHiC in R Universe.
Package 16/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
icetea 1.29.0  (landing page)
Vivek Bhardwaj
git_last_commit: 2bfbdfd
git_last_commit_date: 2025-10-29 10:45:57 -0400
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
See other builds for icetea in R Universe.
Package 17/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
nucleR 2.43.0  (landing page)
Alba Sala
git_last_commit: 3db28f8
git_last_commit_date: 2025-10-29 10:08:16 -0400
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
See other builds for nucleR in R Universe.
Package 18/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
OTUbase 1.61.0  (landing page)
Daniel Beck
git_last_commit: 42c921c
git_last_commit_date: 2025-10-29 10:05:45 -0400
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
See other builds for OTUbase in R Universe.
Package 19/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
posDemux 0.99.11  (landing page)
Jakob Peder Pettersen
git_last_commit: 55e19b6
git_last_commit_date: 2026-02-02 04:15:39 -0400
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
See other builds for posDemux in R Universe.
Package 20/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
QuasR 1.51.0  (landing page)
Michael Stadler
git_last_commit: 331f3b2
git_last_commit_date: 2025-10-29 10:13:16 -0400
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    WARNINGS  NO, package depends on 'txdbmaker' which is not available
See other builds for QuasR in R Universe.
Package 21/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
R453Plus1Toolbox 1.61.1  (landing page)
Hans-Ulrich Klein
git_last_commit: 8022a29
git_last_commit_date: 2026-04-05 11:55:23 -0400
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
See other builds for R453Plus1Toolbox in R Universe.
Package 22/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Rqc 1.45.0  (landing page)
Welliton Souza
git_last_commit: 81cf3fd
git_last_commit_date: 2025-10-29 10:22:46 -0400
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
See other builds for Rqc in R Universe.
Package 23/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RSVSim 1.51.0  (landing page)
Christoph Bartenhagen
git_last_commit: d131b77
git_last_commit_date: 2025-10-29 10:13:10 -0400
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
See other builds for RSVSim in R Universe.
Package 24/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
scruff 1.29.0  (landing page)
Zhe Wang
git_last_commit: e5f29bf
git_last_commit_date: 2025-10-29 10:46:27 -0400
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    OK  NO, package depends on 'txdbmaker' which is not available
See other builds for scruff in R Universe.
Package 25/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
segmentSeq 2.45.0  (landing page)
Samuel Granjeaud
git_last_commit: a33a34a
git_last_commit_date: 2025-10-29 10:04:32 -0400
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
See other builds for segmentSeq in R Universe.
Package 26/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
systemPipeR 2.17.2  (landing page)
Thomas Girke
git_last_commit: e354aff
git_last_commit_date: 2026-03-05 22:18:41 -0400
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
See other builds for systemPipeR in R Universe.
Package 27/27HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
UMI4Cats 1.21.0  (landing page)
Mireia Ramos-Rodriguez
git_last_commit: f049a0a
git_last_commit_date: 2025-10-29 11:01:19 -0400
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
See other builds for UMI4Cats in R Universe.