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This page was generated on 2025-04-08 15:35 -0400 (Tue, 08 Apr 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.1 LTS)x86_644.5.0 beta (2025-04-02 r88102) -- "How About a Twenty-Six" 4723
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 24/432HostnameOS / ArchINSTALLBUILDCHECK
benchmarkfdrData2019 1.21.1  (landing page)
Stephanie Hicks
Snapshot Date: 2025-04-08 07:30 -0400 (Tue, 08 Apr 2025)
git_url: https://git.bioconductor.org/packages/benchmarkfdrData2019
git_branch: devel
git_last_commit: 0b8c964
git_last_commit_date: 2025-03-04 20:50:51 -0400 (Tue, 04 Mar 2025)
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    ERROR  skipped

BUILD results for benchmarkfdrData2019 on nebbiolo2

To the developers/maintainers of the benchmarkfdrData2019 package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: benchmarkfdrData2019
Version: 1.21.1
Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data benchmarkfdrData2019
StartedAt: 2025-04-08 11:08:49 -0400 (Tue, 08 Apr 2025)
EndedAt: 2025-04-08 11:09:32 -0400 (Tue, 08 Apr 2025)
EllapsedTime: 43.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
###
###   /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data benchmarkfdrData2019
###
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* checking for file ‘benchmarkfdrData2019/DESCRIPTION’ ... OK
* preparing ‘benchmarkfdrData2019’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘benchmarkfdrData2019.Rmd’ using rmarkdown

Quitting from benchmarkfdrData2019.Rmd:53-62 [load-pkgs]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `library()`:
! there is no package called 'SummarizedBenchmark'
---
Backtrace:
    ▆
 1. ├─base::suppressPackageStartupMessages(...)
 2. │ └─base::withCallingHandlers(expr, packageStartupMessage = function(c) tryInvokeRestart("muffleMessage"))
 3. └─base::library(SummarizedBenchmark)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'benchmarkfdrData2019.Rmd' failed with diagnostics:
there is no package called 'SummarizedBenchmark'
--- failed re-building ‘benchmarkfdrData2019.Rmd’

SUMMARY: processing the following file failed:
  ‘benchmarkfdrData2019.Rmd’

Error: Vignette re-building failed.
Execution halted