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This page was generated on 2023-04-11 14:50:27 -0400 (Tue, 11 Apr 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.5 LTS)x86_644.2.3 (2023-03-15) -- "Shortstop Beagle" 4502
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for TCGAWorkflowData on nebbiolo2


To the developers/maintainers of the TCGAWorkflowData package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 387/416HostnameOS / ArchINSTALLBUILDCHECK
TCGAWorkflowData 1.22.0  (landing page)
Tiago Chedraoui Silva
Snapshot Date: 2023-04-11 07:30:01 -0400 (Tue, 11 Apr 2023)
git_url: https://git.bioconductor.org/packages/TCGAWorkflowData
git_branch: RELEASE_3_16
git_last_commit: f44df94
git_last_commit_date: 2022-11-01 11:16:28 -0400 (Tue, 01 Nov 2022)
nebbiolo2Linux (Ubuntu 20.04.5 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published

Summary

Package: TCGAWorkflowData
Version: 1.22.0
Command: /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data TCGAWorkflowData
StartedAt: 2023-04-11 10:55:59 -0400 (Tue, 11 Apr 2023)
EndedAt: 2023-04-11 10:58:01 -0400 (Tue, 11 Apr 2023)
EllapsedTime: 122.2 seconds
RetCode: 0
Status:   OK  
PackageFile: TCGAWorkflowData_1.22.0.tar.gz
PackageFileSize: 77.56 MiB

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data TCGAWorkflowData
###
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* checking for file ‘TCGAWorkflowData/DESCRIPTION’ ... OK
* preparing ‘TCGAWorkflowData’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* looking to see if a ‘data/datalist’ file should be added
  NB: this package now depends on R (>= 3.5.0)
  WARNING: Added dependency on R >= 3.5.0 because serialized objects in
  serialize/load version 3 cannot be read in older versions of R.
  File(s) containing such objects:
    ‘TCGAWorkflowData/data/CNV.hg19.bypos.111213.rda’
    ‘TCGAWorkflowData/data/GBMIllumina_HiSeq.rda’
    ‘TCGAWorkflowData/data/LGGIllumina_HiSeq.rda’
    ‘TCGAWorkflowData/data/elmerExample.rda’
    ‘TCGAWorkflowData/data/genes_GR.rda’
    ‘TCGAWorkflowData/data/histoneMarks.rda’
    ‘TCGAWorkflowData/data/met20SamplesGBMLGGchr9.rda’
* building ‘TCGAWorkflowData_1.22.0.tar.gz’