Kuan-Hao Chao
| Snapshot Date: 2023-04-11 07:30:01 -0400 (Tue, 11 Apr 2023) |
| git_url: https://git.bioconductor.org/packages/RNASeqRData |
| git_branch: RELEASE_3_16 |
| git_last_commit: ffe437a |
| git_last_commit_date: 2022-11-01 11:20:00 -0400 (Tue, 01 Nov 2022) |
| Back to Build/check report for BioC 3.16 experimental data |
|
This page was generated on 2023-04-11 14:50:27 -0400 (Tue, 11 Apr 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) | x86_64 | 4.2.3 (2023-03-15) -- "Shortstop Beagle" | 4502 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the RNASeqRData package: Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 319/416 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||||
Kuan-Hao Chao
| nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) / x86_64 | OK | OK | WARNINGS | | |||||||
| Package: RNASeqRData |
| Version: 1.16.0 |
| Command: /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD check --install=check:RNASeqRData.install-out.txt --library=/home/biocbuild/bbs-3.16-bioc/R/site-library --timings RNASeqRData_1.16.0.tar.gz |
| StartedAt: 2023-04-11 12:12:58 -0400 (Tue, 11 Apr 2023) |
| EndedAt: 2023-04-11 12:13:10 -0400 (Tue, 11 Apr 2023) |
| EllapsedTime: 11.7 seconds |
| RetCode: 0 |
| Status: WARNINGS |
| CheckDir: RNASeqRData.Rcheck |
| Warnings: 1 |
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### Running command:
###
### /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD check --install=check:RNASeqRData.install-out.txt --library=/home/biocbuild/bbs-3.16-bioc/R/site-library --timings RNASeqRData_1.16.0.tar.gz
###
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* using log directory ‘/home/biocbuild/bbs-3.16-data-experiment/meat/RNASeqRData.Rcheck’
* using R version 4.2.3 (2023-03-15)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* checking for file ‘RNASeqRData/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘RNASeqRData’ version ‘1.16.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘RNASeqRData’ can be installed ... WARNING
Found the following significant warnings:
Warning: Package 'RNASeqRData' is deprecated and will be removed from
See ‘/home/biocbuild/bbs-3.16-data-experiment/meat/RNASeqRData.Rcheck/00install.out’ for details.
* checking installed package size ... NOTE
installed size is 69.4Mb
sub-directories of 1Mb or more:
extdata 68.5Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking for missing documentation entries ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... NOTE
Package has no Sweave vignette sources and no VignetteBuilder field.
* checking examples ... NONE
* checking PDF version of manual ... OK
* DONE
Status: 1 WARNING, 2 NOTEs
See
‘/home/biocbuild/bbs-3.16-data-experiment/meat/RNASeqRData.Rcheck/00check.log’
for details.
RNASeqRData.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD INSTALL RNASeqRData ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.16-bioc/R/site-library’ * installing *source* package ‘RNASeqRData’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help No man pages found in package ‘RNASeqRData’ *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning: Package 'RNASeqRData' is deprecated and will be removed from Bioconductor version 3.17 ** testing if installed package can be loaded from final location Warning: Package 'RNASeqRData' is deprecated and will be removed from Bioconductor version 3.17 ** testing if installed package keeps a record of temporary installation path * DONE (RNASeqRData)