Package: NCIgraphData

Version: 0.99.4

Command: /home/biocbuild/bbs-2.10-bioc/R/bin/R CMD check --no-vignettes --timings NCIgraphData_0.99.4.tar.gz

StartedAt: 2012-09-23 13:33:10 -0700 (Sun, 23 Sep 2012)

EndedAt: 2012-09-23 13:35:14 -0700 (Sun, 23 Sep 2012)

EllapsedTime: 123.9 seconds

RetCode: 0

Status:  WARNINGS

CheckDir: NCIgraphData.Rcheck

Warnings: 1

* using log directory ‘/loc/home/biocbuild/bbs-2.10-data-experiment/meat/NCIgraphData.Rcheck’
* using R version 2.15.1 (2012-06-22)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘NCIgraphData/DESCRIPTION’ ... OK
* this is package ‘NCIgraphData’ version ‘0.99.4’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package ‘NCIgraphData’ can be installed ... OK
* checking installed package size ... NOTE
  installed size is  5.4Mb
  sub-directories of 1Mb or more:
    data   5.4Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
  
  Note: significantly better compression could be obtained
        by using R CMD build --resave-data
                        old_size new_size compress
  NCI-cyList.RData         4.3Mb    2.0Mb       xz
  reactome-cyList.RData    1.1Mb    558Kb       xz
* checking examples ... OK
* checking PDF version of manual ... OK

WARNING: There was 1 warning.
NOTE: There was 1 note.
See
  ‘/loc/home/biocbuild/bbs-2.10-data-experiment/meat/NCIgraphData.Rcheck/00check.log’
for details.

* installing *source* package ‘NCIgraphData’ ...
** data
**  moving datasets to lazyload DB
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded

* DONE (NCIgraphData)

name	user	system	elapsed
NCI.cyList	6.352	0.264	7.303
reactome.cyList	0.584	0.040	0.623