plateCore

This package is for version 3.9 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see plateCore.

Statistical tools and data structures for plate-based flow cytometry


Bioconductor version: 3.9

Provides basic S4 data structures and routines for analyzing plate based flow cytometry data.

Author: Errol Strain, Florian Hahne, and Perry Haaland

Maintainer: Errol Strain <estrain at gmail.com>

Citation (from within R, enter citation("plateCore")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("plateCore")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("plateCore")
An R Package for Analysis of High Throughput Flow Cytometry Data PDF R Script
Reference Manual PDF

Details

biocViews CellBasedAssays, FlowCytometry, ImmunoOncology, Infrastructure, Software
Version 1.41.1
In Bioconductor since BioC 2.5 (R-2.10) (14.5 years)
License Artistic-2.0
Depends R (>= 2.10), flowCore, flowViz, lattice, latticeExtra
Imports Biobase, flowCore, graphics, grDevices, lattice, MASS, methods, robustbase, stats, utils, flowStats
System Requirements
URL http://www.bioconductor.org
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Suggests gplots
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package plateCore_1.41.1.tar.gz
Windows Binary plateCore_1.41.1.zip
Mac OS X 10.11 (El Capitan) plateCore_1.41.1.tgz
Source Repository git clone https://git.bioconductor.org/packages/plateCore
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/plateCore
Bioc Package Browser https://code.bioconductor.org/browse/plateCore/
Package Short Url https://bioconductor.org/packages/plateCore/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.9 Source Archive