flowViz

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see flowViz.

Visualization for flow cytometry


Bioconductor version: 3.9

Provides visualization tools for flow cytometry data.

Author: B. Ellis, R. Gentleman, F. Hahne, N. Le Meur, D. Sarkar, M. Jiang

Maintainer: Mike Jiang <wjiang2 at fhcrc.org>

Citation (from within R, enter citation("flowViz")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("flowViz")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowViz")
Visualizing Gates with Flow Cytometry Data HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews CellBasedAssays, FlowCytometry, ImmunoOncology, Infrastructure, Software, Visualization
Version 1.48.0
In Bioconductor since BioC 2.0 (R-2.5) (17 years)
License Artistic-2.0
Depends R (>= 2.7.0), flowCore(>= 1.41.9), lattice
Imports stats4, Biobase, flowCore, graphics, grDevices, grid, KernSmooth, lattice, latticeExtra, MASS, methods, RColorBrewer, stats, utils, hexbin, IDPmisc
System Requirements
URL
See More
Suggests colorspace, flowStats, knitr
Linking To
Enhances
Depends On Me flowFP, flowQ, flowTrans, flowVS, highthroughputassays, plateCore, QUALIFIER
Imports Me flowClust, flowFit, flowQ, flowStats, flowTrans, flowWorkspace, ncdfFlow, openCyto, QUALIFIER
Suggests Me flowBeads, flowClean, flowCore, flowTime, ggcyto
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package flowViz_1.48.0.tar.gz
Windows Binary flowViz_1.48.0.zip
Mac OS X 10.11 (El Capitan) flowViz_1.48.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/flowViz
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/flowViz
Bioc Package Browser https://code.bioconductor.org/browse/flowViz/
Package Short Url https://bioconductor.org/packages/flowViz/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.9 Source Archive