ScISI

This package is for version 3.9 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see ScISI.

In Silico Interactome


Bioconductor version: 3.9

Package to create In Silico Interactomes

Author: Tony Chiang <tchiang at fhcrc.org>

Maintainer: Tony Chiang <tchiang at fhcrc.org>

Citation (from within R, enter citation("ScISI")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ScISI")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ScISI")
ScISI Vignette PDF R Script
Reference Manual PDF

Details

biocViews DecisionTree, GraphAndNetwork, NetworkInference, Proteomics, Software
Version 1.56.0
In Bioconductor since BioC 1.8 (R-2.3) (18 years)
License LGPL
Depends R (>= 2.10), GO.db, RpsiXML, annotate, apComplex
Imports AnnotationDbi, GO.db, RpsiXML, annotate, methods, org.Sc.sgd.db, utils
System Requirements
URL
See More
Suggests ppiData, xtable
Linking To
Enhances
Depends On Me PCpheno, ppiStats, SLGI
Imports Me PCpheno, SLGI
Suggests Me RpsiXML
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ScISI_1.56.0.tar.gz
Windows Binary ScISI_1.56.0.zip
Mac OS X 10.11 (El Capitan) ScISI_1.56.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/ScISI
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ScISI
Bioc Package Browser https://code.bioconductor.org/browse/ScISI/
Package Short Url https://bioconductor.org/packages/ScISI/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.9 Source Archive