Package	Download_score
affy	8554
Biobase	47485
BiocParallel	41814
genefilter	12973
clstutils	61
IRanges	51052
MotifDb	642
BiocCaseStudies	16
topGO	3028
BeadDataPackR	662
CMA	115
mitoODE	12
BSgenome	13590
nucleR	80
limmaGUI	72
QuasR	355
genomeIntervals	178
flowCore	2872
TDARACNE	16
frmaTools	73
seqCNA	51
sva	7145
ChAMP	545
AffyCompatible	24
metaMS	103
KCsmart	64
CAGEr	119
ArrayTV	15
illuminaio	2914
snpStats	2254
Ringo	348
cisPath	56
AffyExpress	14
BufferedMatrix	94
SNAGEE	54
MVCClass	91
ontoCAT	12
anota	85
flagme	59
CSAR	79
biocViews	4243
BicARE	134
GEOmetadb	236
mmnet	9
GeneSelectMMD	105
VariantTools	169
GenomeGraphs	19
cnvGSA	64
CoCiteStats	55
DECIPHER	2800
weaver	61
geneRecommender	55
RankProd	292
cycle	60
ADaCGH2	71
RNAither	17
GRENITS	58
AgiMicroRna	135
IsoGeneGUI	15
Rolexa	8
BufferedMatrixMethods	59
flowCL	19
hyperdraw	113
gmapR	169
ASSET	105
ENVISIONQuery	13
ProCoNA	12
lpNet	65
flowMeans	158
ampliQueso	11
pgUtils	3
OmicCircos	189
fabia	176
MSstats	508
ReactomePA	2362
deepSNV	161
PAPi	18
ensemblVEP	163
BHC	85
iSeq	51
jmosaics	7
rsbml	155
sigPathway	28
SJava	5
MEDME	54
MiChip	54
ccrepe	89
triplex	55
asmn	4
Roleswitch	14
TFBSTools	3242
prebs	70
omicade4	136
gene2pathway	4
TitanCNA	81
cosmo	3
GeneRfold	2
Seqnames	0
hexbin	20
Rqc	264
rRDP	63
RUVnormalize	66
SNPRelate	1646
GenomicInteractions	351
GenoView	2
GSReg	61
kebabs	147
netbiov	31
tracktables	116
compEpiTools	70
MBASED	54
metabomxtr	55
methylPipe	120
miRNAtap	144
CoRegNet	44
geecc	7
GeneticsBase	3
affydata	2
gff3Plotter	2
genomation	635
pairseqsim	2
arrayQCplot	2
TRONCO	72
EDASeq	1774
les	93
GenomicFeatures	20124
DEXSeq	1494
ReportingTools	717
Rgraphviz	9965
ITALICS	59
AnnotationForge	2486
affyQCReport	20
AnnotationDbi	36690
BiGGR	67
preprocessCore	14166
GlobalAncova	1090
girafe	92
GSVA	6009
wateRmelon	734
made4	239
MLInterfaces	382
ChIPpeakAnno	990
networkBMA	16
NormqPCR	173
Sushi	62
Agi4x44PreProcess	5
annaffy	276
RIPSeeker	25
ChromHeatMap	124
CNAnorm	65
spade	11
genomes	67
lol	11
flowTrans	84
flowType	16
flowUtils	40
timecourse	72
GOFunction	15
TargetSearch	70
MSnbase	3304
Rbowtie	511
DOSE	17027
synapter	93
affypdnn	15
daMA	57
clusterProfiler	17410
Gviz	3920
CGEN	64
ChemmineOB	338
ChemmineR	902
chimera	18
cleanUpdTSeq	105
Mfuzz	1166
cn.mops	264
mdqc	102
LVSmiRNA	14
ExiMiR	59
Clomial	54
GeneOverlap	435
EBImage	2670
spikeLI	48
antiProfiles	62
CNORfuzzy	67
BioMVCClass	59
iClusterPlus	336
coRNAi	12
goseq	1155
MIMOSA	31
MLSeq	157
GeneticsPed	102
BioNet	279
epigenomix	61
ddgraph	11
deltaGseg	55
keggorthology	142
COHCAP	59
PWMEnrich	162
affycomp	97
piano	468
SwimR	11
MMDiff	9
motifStack	715
BCRANK	71
metaSeq	68
CNORdt	65
HilbertVisGUI	38
ecolitk	58
tRanslatome	118
PANR	57
exomePeak	19
fastseg	758
procoil	61
rBiopaxParser	169
ReQON	46
BrainStars	15
ssize	92
mBPCR	59
GLAD	229
PSICQUIC	23
xmapcore	3
proteinProfiles	53
RTCA	59
MLP	123
UniProt.ws	423
CoGAPS	252
DMRforPairs	27
Resourcerer	5
tilingArray	144
clonotypeR	19
TurboNorm	62
unifiedWMWqPCR	53
DFP	55
GSCA	60
CNEr	3251
roar	59
snpMatrix	9
edd	3
ontoTools	3
exonmap	3
regionReport	126
Rnits	53
EnrichmentBrowser	552
SGSeq	313
FEM	22
ssviz	54
GOexpress	89
GSAR	87
hiAnnotator	108
interactiveDisplayBase	10030
proBAMr	53
mygene	345
OncoSimulR	60
PAA	69
pepStat	51
polyester	122
CFAssay	51
ASGSCA	59
gQTLstats	10
mdgsa	9
aCGH	214
eiR	67
DESeq	196
a4Base	137
codelink	75
snm	166
limma	31601
Rsamtools	23256
rfPred	56
annotate	18106
GOSim	116
Category	1913
biocGraph	162
BioSeqClass	16
cghMCR	67
Icens	461
NTW	52
minfi	2330
BayesPeak	17
pkgDepTools	22
gcrma	1374
widgetTools	1277
CoverageView	66
logicFS	87
plgem	111
seqLogo	3581
pdInfoBuilder	115
STRINGdb	1143
SplicingGraphs	91
ctc	283
SimBindProfiles	54
genoset	22
mgsa	109
bioDist	262
arrayQuality	98
bumphunter	2707
CGHbase	439
birta	17
CNTools	132
CNVtools	13
spkTools	53
BitSeq	23
AnnotationFuncs	18
HTSanalyzeR	17
messina	56
altcdfenvs	116
affycoretools	399
Vega	12
Repitools	320
easyRNASeq	180
customProDB	83
isobar	83
vbmp	74
dks	51
PING	68
macat	46
RDAVIDWebService	33
ReadqPCR	203
RbcBook1	77
spotSegmentation	12
HELP	57
msmsTests	270
SeqVarTools	444
spliceSites	15
ARRmNormalization	57
SIM	53
HTSFilter	222
iterativeBMA	59
hypergraph	161
PCpheno	15
OLIN	91
ExpressionView	16
rama	17
flowMap	46
flowPhyto	5
rqubic	83
IPPD	14
RWebServices	4
cobindR	13
sagenhaft	54
TSSi	14
BaseSpaceR	64
VariantFiltering	88
BiSeq	145
Rcpi	121
RDRToolbox	124
triform	15
Rdisop	465
paircompviz	60
OLINgui	56
PROcess	92
RefNet	13
qcmetrics	94
COMPASS	78
GeneGroupAnalysis	3
cosmoGUI	3
RMAGEML	3
GenomicTuples	50
csaw	607
derfinderHelper	574
derfinder	576
exonfindR	0
groHMM	72
Pviz	76
quantro	335
MSGFplus	13
MSnID	242
paxtoolsr	79
oposSOM	77
FourCSeq	11
Ruuid	4
riboSeq	0
nethet	52
biocDatasets	2
SAGx	18
zlibbioc	50903
a4	86
eisa	15
GeneMeta	100
SamSPECTRAL	147
bgafun	13
GWASTools	596
GGBase	17
quantsmooth	619
prada	21
NetSAM	62
ShortRead	6293
TypeInfo	50
rpx	243
iBMQ	48
beadarray	702
pickgene	51
xps	16
ggbio	2142
DeconRNASeq	222
CorMut	13
LPE	89
flowViz	1058
PLPE	57
MassSpecWavelet	1933
RchyOptimyx	14
biovizBase	5540
idiogram	59
NCIgraph	116
miRNApath	65
pcaGoPromoter	14
mzID	3159
phyloseq	5434
ArrayExpress	425
trio	99
imageHTS	23
GeneRegionScan	63
mzR	3459
ChIPseqR	85
ChIPsim	87
minet	770
metahdep	58
DESeq2	21564
splicegear	13
spliceR	15
pcaMethods	5250
beadarraySNP	54
ACME	86
fdrame	51
DynDoc	1276
copa	57
INPower	56
genefu	420
geNetClassifier	148
crlmm	238
SBMLR	67
CORREP	52
BiocCheck	1653
maanova	20
pvac	54
h5vc	82
OCplus	80
qrqc	24
rbsurv	63
segmentSeq	62
twilight	109
clst	93
multiscan	54
GEOsubmission	56
bioassayR	75
graphite	2969
gaia	26
iPAC	130
MassArray	53
BEAT	61
globaltest	1807
gCMAPWeb	14
IdMappingRetrieval	14
CRISPRseek	160
plrs	13
SeqGSEA	132
joda	13
HEM	53
HTqPCR	160
ChIPXpress	100
trackViewer	487
puma	100
r3Cseq	88
DriverNet	58
flowBeads	61
flowFlowJo	6
CAFE	71
pcot2	15
iChip	53
RNASeqPower	146
SeqArray	912
RTopper	58
REDseq	84
Rariant	15
ArrayExpressHTS	17
MiPP	54
tigre	58
domainsignatures	12
PADOG	238
webbioc	63
PECA	63
DirichletMultinomial	4566
pathifier	124
scsR	14
viper	700
CSSP	29
simulatorAPMS	3
pxr	0
pamr	5
DEGreport	582
facopy	5
shinyMethyl	106
flowCHIC	60
STATegRa	60
switchBox	121
HDTD	48
IMPCdata	48
PSEA	45
ALDEx2	1182
missMethyl	964
monocle	3047
COSNet	50
Rdbi	3
rflowcyt	3
fbat	3
FlowSOM	1077
PROPER	85
KEGGprofile	22
chipseq	610
pathRender	60
geneplotter	7181
biomaRt	23993
vsn	5302
siggenes	3344
affxparser	1583
GeneticsDesign	14
GOstats	1731
attract	73
RBGL	9466
marray	1887
multtest	12407
MmPalateMiRNA	15
Harshlight	70
safe	610
OrganismDbi	3231
hpar	273
copynumber	144
sRAP	14
frma	156
cellHTS2	204
flowPlots	58
FunciSNP	14
chipenrich	159
apComplex	65
GenomicFiles	1292
GOSemSim	16699
Streamer	60
factDesign	55
cummeRbund	230
qvalue	16914
MergeMaid	16
a4Core	162
affyPara	16
HMMcopy	261
aroma.light	1964
CGHregions	81
phenoDist	12
ppiStats	16
ABSSeq	116
occugene	49
SPIA	651
ArrayTools	18
clipper	101
flowClust	833
DSS	931
farms	46
FGNet	114
GeneExpressionSignature	68
pint	11
dagLogo	82
SCAN.UPC	163
iterativeBMAsurv	54
plethy	22
BAGS	59
hapFabia	57
diffGeneAnalysis	55
GraphAT	57
RSVSim	66
alsace	16
TransView	55
pRoloc	257
QDNAseq	383
MethylSeekR	140
stepNorm	54
SRAdb	378
affyContam	100
MANOR	56
metaArray	14
genArise	57
intansv	80
AGDEX	65
PICS	113
RCASPAR	51
htSeqTools	16
sangerseqR	898
gprege	14
betr	10
bridge	17
yaqcaffy	15
coGPS	56
msmsEDA	287
sizepower	62
EasyqpcR	16
bsseq	1425
inveRsion	16
BUS	59
SigFuge	58
SLqPCR	61
RPA	104
maDB	4
xmapbridge	55
nem	18
annmap	115
RBioinf	65
waveTiling	15
SQUADD	45
Starr	14
savR	28
PhenStat	60
NetPathMiner	61
MCRestimate	14
DBChIP	18
qusage	396
neaGUI	7
OTUbase	62
dexus	18
ChIPQC	331
CopyNumber450k	7
RRHO	98
Rtreemix	58
iFlow	3
arrayMagic	2
iSPlot	2
derfinderPlot	145
RUVSeq	935
seqTools	121
SigCheck	56
flowcatchR	59
specL	59
M3D	8
NGScopy	7
MGFM	60
mQTL.NMR	5
ClassifyR	285
mvGST	4
makePlatformDesign	2
SemSim	2
Rintact	2
rgsepd	49
gQTLBase	12
cpvSNP	57
ChromoViz	2
KEGGgraph	5604
GenomeInfoDb	57167
LBE	242
sigaR	14
GenomicRanges	42136
xcms	1860
KEGGREST	35595
affyio	8400
GEOquery	9024
GenomicAlignments	23873
rhdf5	19596
VariantAnnotation	9475
GeneAnswers	25
arrayQualityMetrics	498
Heatplus	408
gaga	103
GSEABase	8683
RNAinteract	78
methylumi	1446
sscore	31
maSigPro	254
pvca	245
NarrowPeaks	15
gaggle	46
flowMerge	138
ncdfFlow	1154
EBcoexpress	77
categoryCompare	69
AffyRNADegradation	61
CGHcall	401
metagenomeSeq	1666
snapCGH	105
SNPchip	20
RmiR	14
annotationTools	129
CAMERA	487
CNORfeeder	70
TCC	194
RCytoscape	12
NOISeq	557
ABarray	75
clusterStab	78
BAC	17
HilbertVis	183
geneRxCluster	56
GOTHiC	89
GEWIST	50
fastLiquidAssociation	55
ddCt	91
DiffBind	1047
RamiGO	11
flipflop	13
GeneNetworkBuilder	76
ConsensusClusterPlus	2963
AtlasRDF	9
tspair	16
exomeCopy	299
OutlierD	14
Rcade	20
Rchemcpp	14
qpcrNorm	62
nudge	11
a4Preproc	180
rTRMui	63
goTools	64
PAnnBuilder	13
qpgraph	182
a4Reporting	117
BiRewire	116
maskBAD	60
plw	15
PROMISE	102
goProfiles	124
matchBox	54
MeasurementError.cor	51
staRank	64
iBBiG	124
ELBOW	15
flowBin	68
flowCyBar	54
flowFit	15
gCMAP	15
CellNOptR	194
rTRM	142
agilp	91
affyILM	67
VegaMC	52
matchprobes	2
predictionet	14
Risa	58
DEGraph	68
ternarynet	56
cleaver	197
UNDO	72
RMAPPER	4
S4Vectors	54690
RTools4TB	2
DupChecker	6
SemDist	46
proteoQC	9
hiReadsProcessor	57
MAIT	60
MEIGOR	56
ToPASeq	8
pRolocGUI	85
rain	91
BridgeDbR	78
Pbase	10
Polyfit	9
MBAmethyl	41
MethylMix	95
MPFE	45
AnnBuilder	2
SAGElyzer	2
RSNPper	2
BeadExplorer	2
saps	3
AnalysisPageServer	8
QuartPAC	61
DNAcopy	5164
trigger	62
rtracklayer	21395
graph	18565
SMAP	45
BiocGenerics	55699
simpleaffy	98
DASiR	8
edgeR	22976
affyPLM	1198
GeneSelector	14
GSEAlm	80
CRImage	81
oligoClasses	1678
baySeq	416
tkWidgets	1277
netresponse	70
rnaSeqMap	16
randPack	56
seqbias	76
HybridMTest	130
HCsnip	11
lumi	1124
SPEM	72
ASEB	57
Rsubread	2246
makecdfenv	173
Rmagpie	55
flowQB	17
flowStats	523
EBSeq	412
DrugVsDisease	136
CompGO	13
npGSEA	59
DAVIDQuery	7
rols	425
SLGI	16
GENE.E	12
RedeR	334
CGHnormaliter	67
charm	15
compcodeR	86
methylMnM	75
lmdme	54
GGtools	19
clippda	62
Clonality	30
panp	58
NuPoP	71
SpacePAC	96
ROC	1027
HiTC	135
AnnotationHub	11212
RMassBank	101
CNORode	93
phenoTest	136
MineICA	75
XDE	64
casper	62
COPDSexualDimorphism	3
FRGEpistasis	57
massiR	59
metaseqR	19
bgx	65
RTN	172
HTSeqGenie	54
DEDS	14
AffyTiling	9
VanillaICE	182
BADER	63
BRAIN	110
flowMatch	69
MinimumDistance	66
motifRG	15
QUALIFIER	15
maCorrPlot	56
cn.farms	64
OrderedList	80
MEDIPS	111
RefPlus	41
Genominator	16
GraphAlignment	59
inSilicoMerging	14
MantelCorr	50
IdMappingAnalysis	12
nondetects	66
BGmix	24
PREDA	85
cancerclass	78
ibh	53
vtpnet	72
MotIV	29
R453Plus1Toolbox	65
explorase	14
flowFP	159
iASeq	52
LiquidAssociation	82
ROntoTools	215
CALIB	15
mcaGUI	14
logitT	33
MiRaGE	60
PGSEA	50
RLMM	53
ASSIGN	109
parody	100
biosvd	13
plateCore	14
sapFinder	14
RpsiXML	20
DART	62
PathNet	67
supraHex	424
CNVrd2	62
KEGGSOAP	6
RGSEA	67
DOQTL	10
EBSeqHMM	50
erccdashboard	65
seqplots	12
flowClean	204
flowDensity	264
GOsummaries	56
IdeoViz	66
systemPipeR	1187
ballgown	642
MoPS	7
MSGFgui	10
focalCall	6
GeneSpring	3
msQC	0
BiocInstaller	463
inSilicoDb	13
openCyto	675
XVector	47755
Biostrings	45403
impute	10460
adSplit	70
gpls	168
DEGseq	163
oligo	1603
bigmemoryExtras	15
rSFFreader	10
shinyTANDEM	13
splots	208
genoCN	55
nnNorm	58
chopsticks	93
flowWorkspace	1302
methyAnalysis	20
gage	802
rHVDM	13
BiocStyle	6404
flowQ	10
fmcsR	269
EBarrays	226
mosaics	137
SSPA	65
rTANDEM	17
a4Classif	115
arrayMvout	61
LPEadj	44
CexoR	63
chroGPS	14
cqn	287
SpeCond	71
manta	14
reb	13
DMRcate	836
gaucho	11
MeSHDbi	264
meshr	141
Mirsynergy	12
ffpe	71
convert	148
maPredictDSC	60
hopach	311
pathview	4338
tweeDEseq	136
affylmGUI	84
survcomp	1051
DNaseR	5
Basic4Cseq	64
oneChannelGUI	13
maigesPack	44
methVisual	14
virtualArray	6
MBCB	54
iontree	12
sSeq	175
EDDA	16
ChIPseeker	1802
AllelicImbalance	101
CancerMutationAnalysis	15
cellGrowth	13
cellHTS	11
RGalaxy	16
OSAT	66
GSRI	60
LMGene	14
interactiveDisplay	103
Mulcom	75
GeneGA	46
biomvRCNS	56
prot2D	12
DTA	86
dualKS	16
dyebias	60
epivizr	120
flowPeaks	180
GraphPAC	102
gwascat	598
lapmix	52
plier	116
Cormotif	58
ScISI	20
TargetScore	66
stepwiseCM	10
rGADEM	280
rMAT	12
microRNA	159
pdmclass	11
SomaticSignatures	179
TEQC	68
SANTA	55
SomatiCA	10
GeneTraffic	3
externalVector	3
PatientGeneSets	2
GeneR	4
riboSeqR	47
simulatorZ	9
STAN	15
pepXMLTab	59
MethylAid	90
metagene	32
MultiMed	53
blima	56
TSCAN	613
wavClusteR	61
Metab	27
cosmiq	58
AIMS	428
RdbiPgSQL	2
keggorth	2
stam	2
Rredland	2
GeneTS	2
gespeR	86
dupRadar	106
podkat	54
EnrichedHeatmap	559
DAPAR	130
lfa	292
ENCODExplorer	8
caOmicsV	8
EMDomics	68
BEclear	70
GENESIS	340
SICtools	46
RCyjs	72
goCluster	1
R4RNA	628
traseR	51
BrowserVizDemo	3
INSPEcT	68
diffHic	107
TimerQuant	0
dcGSA	51
CODEX	103
SIMAT	54
seqPattern	652
ChIPComp	62
CAnD	10
FISHalyseR	51
birte	7
Imetagene	8
RCy3	945
RareVariantVis	62
Prostar	76
erma	95
Path2PPI	59
OperaMate	4
SVM2CRM	7
AnnotationHubData	370
TIN	51
TPP	94
FlowRepositoryR	10
hierGWAS	56
GEOsearch	4
mAPKL	12
globalSeq	53
rCGH	110
systemPipeRdata	0
exprExternal	1
gdsfmt	2100
LEA	516
coMET	86
ldblock	78
gcatest	55
miRcomp	53
FindMyFriends	11
edge	99
LowMACA	17
parglms	51
Oscope	88
gtrellis	129
R3CPET	55
RTCGA	541
eudysbiome	46
CausalR	64
BrowserViz	174
InPAS	59
sidap	0
mtbls2	0
mmgmos	1
Cardinal	170
MeSHSim	3
Guitar	132
regioneR	2049
LOLA	305
OmicsMarkeR	8
DChIPRep	9
GeneBreak	64
sigsquared	51
SNPhood	58
DMRcaller	81
ProteomicsAnnotationHubData	10
HilbertCurve	88
msa	1532
TCGAbiolinks	3557
SELEX	54
ComplexHeatmap	13984
MethTargetedNGS	50
rGREAT	652
widgetInvoke	2
multiClust	86
Rhtslib	24360
sincell	59
TarSeqQC	13
SISPA	29
CNPBayes	7
rcellminer	65
motifbreakR	213
GUIDEseq	78
cogena	85
LedPred	46
mogsa	172
seq2pathway	111
ABAEnrichment	11
scde	339
variancePartition	947
pandaR	126
RTCGAToolbox	573
rnaseqcomp	59
similaRpeak	59
mirIntegrator	66
immunoClust	66
FamAgg	74
pwOmics	106
bim	1
GenomeBase	1
rfcdmin	1
ggtree	20182
muscle	321
chromDraw	55
biobroom	191
canceR	86
MEAL	80
genotypeeval	15
DNABarcodes	167
pmm	45
sbgr	2
XBSeq	9
CopywriteR	25
acde	65
soGGi	329
IONiseR	70
GoogleGenomics	6
destiny	683
NanoStringQCPro	44
HIBAG	129
normalize450K	48
SWATH2stats	59
SummarizedExperiment	38282
reposTools	1
iSNetwork	2
applera	1
lpsymphony	1143
SNAData	2
kimod	6
ProtGenerics	11757
netbenchmark	8
myvariant	84
DeMAND	51
iCheck	54
bamsignals	1119
NanoStringDiff	92
miRLAB	64
ensembldb	9947
skewr	43
iGC	51
PGA	11
OGSA	7
RnBeads	287
SEPA	6
flowVS	101
RBM	57
RnaSeqSampleSize	91
pathVar	25
iCOBRA	164
BioQC	116
biomformat	5469
profileScoreDist	48
ENmix	207
ropls	1199
RNAprobR	7
cytofkit	24
diggit	52
metagenomeFeatures	9
BBCAnalyzer	58
IVAS	79
CNVPanelizer	59
conumee	156
GreyListChIP	973
ELMER	178
metaX	3
RiboProfiling	80
RUVcorr	58
DiffLogo	64
Prize	8
synlet	49
MatrixRider	61
BubbleTree	69
fCI	52
subSeq	69
y2hStat	1
transcriptR	68
consensusSeekeR	103
scran	4708
contiBAIT	52
epivizrServer	146
splineTCDiffExpr	1
SwathXtend	62
AneuFinder	85
PanVizGenerator	10
dada2	2224
Mergeomics	63
miRNAmeConverter	57
HDF5Array	12703
ImmuneSpaceR	62
Linnorm	222
DRIMSeq	307
CrispRVariants	132
netprioR	49
covRNA	54
maftools	2561
Director	45
SNPediaR	51
MADSEQ	54
RCAS	128
SPLINTER	57
MoonlightR	71
psichomics	71
yamss	60
flowPloidy	63
fCCAC	54
CancerInSilico	18
samExploreR	8
LymphoSeq	64
DEFormats	261
debrowser	178
SMITE	56
IHW	722
doppelgangR	122
ExpressionAtlas	161
iCARE	113
pbcmc	5
MultiDataSet	1215
ggcyto	911
GSALightning	53
fgsea	16498
ASAFE	49
geneplast	93
qsea	65
ImpulseDE	6
MODA	55
CancerSubtypes	108
FunChIP	54
eegc	80
LINC	8
SIMLR	254
KEGGlincs	68
MAST	2033
StarBioTrek	53
GOpro	115
chimeraviz	105
tximport	3325
scater	6774
Glimma	1216
MMDiff2	50
cellity	62
genphen	9
CINdex	70
clustComp	62
tofsims	9
EWCE	140
ExperimentHubData	295
EGSEA	138
MethPed	52
isomiRs	123
EGAD	63
epivizrStandalone	61
CytoML	464
normr	134
alpine	45
philr	183
proFIA	13
yarn	135
anamiR	8
BiocWorkflowTools	179
CCPROMISE	62
BUMHMM	52
ramwas	125
ISoLDE	44
OncoScore	56
flowAI	561
PCAN	59
JunctionSeq	13
diffloop	29
EpiCluster	0
clusterExperiment	352
ccmap	75
ASpli	102
DeepBlueR	45
recount	405
GRmetrics	85
M3Drop	594
matter	208
TVTB	60
MetaboSignal	117
synergyfinder	184
YAPSA	80
gCrisprTools	59
bigmelon	63
gcapc	55
DelayedArray	43080
sparseDOSSA	36
coseq	113
BatchQC	107
epivizrData	129
EBSEA	49
CountClust	11
sscu	49
QUBIC	136
pqsfinder	75
pcaExplorer	473
psygenet2r	70
GenVisR	293
methylKit	640
rDGIdb	77
AMOUNTAIN	93
covEB	49
MetCirc	69
chromstaR	87
geneAttribution	52
annotatr	477
clusterSeq	42
nucleoSim	57
ROTS	207
cellTree	14
chromPlot	135
Uniquorn	56
sevenbridges	64
oppar	61
garfield	54
ExperimentHub	7471
BgeeDB	117
EmpiricalBrownsMethod	130
dSimer	7
esetVis	73
MGFR	64
CVE	6
LOBSTAHS	54
switchde	57
statTarget	96
IWTomics	52
geneXtendeR	109
phosphonormalizer	49
BaalChIP	59
uSORT	48
MutationalPatterns	334
CellMapper	62
HelloRanges	133
MWASTools	150
RJMCMCNucleosomes	55
PureCN	161
Chicago	92
GMRP	52
CHRONOS	56
ClusterSignificance	56
metaCCA	190
MultiAssayExperiment	5160
SpidermiR	79
QuaternaryProd	74
recoup	54
RImmPort	47
bacon	105
biosigner	82
MBttest	51
Harman	167
bioCancer	72
Pigengene	118
crossmeta	167
NetCRG	0
BayesKnockdown	55
IPO	120
GeneGeneInteR	55
ctsGE	58
SVAPLSseq	7
GAprediction	51
treeio	19780
meshes	149
PharmacoGx	273
readat	8
regsplice	50
DEsubs	57
FitHiC	61
Anaquin	57
RnaSeqGeneEdgeRQL	2
InteractionSet	1858
SC3	394
GenoGAM	10
splineTimeR	66
odseq	65
BadRegionFinder	56
RGraph2js	53
genbankr	120
BasicSTARRseq	56
DNAshapeR	75
GenRank	7
CONFESS	60
msPurity	77
sights	54
GEM	57
SRGnet	7
PathoStat	66
signeR	74
Pi	71
BPRMeth	91
crisprseekplus	29
scDD	139
GRridge	15
scone	109
cellscape	42
timescape	76
Organism.dplyr	427
IntEREst	67
RTNduals	81
basecallQC	66
TSRchitect	11
flowTime	63
GenomicDataCommons	1167
goSTAG	60
ideal	105
Logolas	8
MaxContrastProjection	8
pathprint	7
IntramiRExploreR	49
mfa	82
beachmat	15225
EpiDISH	586
TFARM	48
seqcombo	53
cbaf	60
ANF	51
MetaCyto	74
esATAC	91
omicsPrint	53
LineagePulse	40
gep2pep	52
heatmaps	239
branchpointer	73
DMRScan	48
metavizr	13
PPInfer	118
rqt	53
swfdr	58
banocc	73
GA4GHclient	108
geneClassifiers	50
netReg	8
coexnet	13
SingleCellExperiment	14704
SCnorm	93
CEMiTool	140
diffuStats	67
oneSENSE	19
miRsponge	6
amplican	81
seqCAT	56
biobase	1
geoquery	0
trena	39
rhvdm	0
PROPS	52
restfulSE	109
transcriptogramer	60
chromswitch	27
ivygapSE	50
affyplm	0
splatter	425
BioCor	81
motifcounter	57
STROMA4	30
ChIPexoQual	65
REMP	69
twoddpcr	55
hicrep	11
methInheritSim	62
DASC	2
motifmatchr	1335
Scale4C	45
Rhdf5lib	23474
GA4GHshiny	64
TReNA	2
BiocSklearn	72
RVS	50
ChIPanalyser	54
multiMiR	223
AUCell	2188
InterMineR	64
TFHAZ	52
methyvim	8
oncomix	49
iterClust	46
vulcan	64
EventPointer	64
semisup	48
AnnotationFilter	10437
ATACseqQC	344
methylInheritance	64
MIGSA	14
TCseq	155
miRBaseConverter	117
ndexr	70
phenopath	88
epivizrChart	57
scmap	259
openPrimeRui	62
iranges	1
biostrings	0
panelcn.mops	81
SeqSQC	86
TnT	43
ontoProc	223
rhdf5client	144
runibic	78
stageR	180
tenXplore	52
sampleClassifier	54
karyoploteR	877
GISPA	45
GenomicScores	641
discordant	83
multiOmicsViz	42
NADfinder	58
RITAN	62
RIVER	51
CATALYST	476
epiNEM	146
IMAS	58
IsoformSwitchAnalyzeR	258
HiCcompare	289
GENIE3	1178
zFPKM	111
DEP	489
cytolib	2802
apeglm	3412
openPrimeR	127
SPONGE	57
chromVAR	1104
PathwaySplice	6
pcxn	49
scPipe	134
topdownr	74
TFEA.ChIP	67
TCGAbiolinksGUI	26
RaggedExperiment	921
pgca	48
ImpulseDE2	12
MCbiclust	53
RTNsurvival	61
scoreInvHap	57
OPWeight	51
rexposome	103
Onassis	10
MSstatsQC	76
TMixClust	63
BASiCS	167
Rbowtie2	308
scfind	6
annbuilder	0
bnbc	116
DelayedMatrixStats	16244
anota2seq	75
methimpute	58
JASPAR2018	3
loci2path	49
MAGeCKFlute	370
BiocFileCache	26080
biotmle	60
cydar	86
DaMiRseq	120
mimager	64
funtooNorm	60
consensusOV	111
M3C	691
miRmine	34
shortread	0
Doscheda	60
MIRA	123
GOfuncR	283
flowclust	1
mapscape	51
BioMedR	3
BLMA	69
cellbaseR	72
msgbsR	66
POST	8
wiggleplotr	167
zinbwave	877
RProtoBufLib	2722
ClusterJudge	53
IrisSpatialFeatures	3
microbiome	1649
DMCHMM	52
bsgenome	0
slalom	103
mpra	57
progeny	410
bcSeq	60
signet	7
MetaNeighbor	91
biocinstaller	2
enrichplot	17022
CHARGE	6
MetaGxOvarian	2
srnadiff	53
mCSEA	105
RSeqAn	81
decontam	1652
InTAD	53
ipdDb	104
igvR	110
singscore	1254
CAGEfightR	158
MSstatsQCgui	45
appreci8R	99
CellTrails	55
LRBaseDbi	114
Rmmquant	48
miRSM	41
DEqMS	225
compartmap	35
MPRAnalyze	61
annotationdbi	1
dnacopy	1
rScudo	51
hipathia	124
pogos	60
dmrseq	198
singleCellTK	247
FELLA	128
SummarizedBenchmark	51
CAMTHC	4
perturbatr	7
phantasus	145
slingshot	1458
sevenC	50
methylGSA	107
scruff	66
SIMD	50
sparsenetgls	48
tRNAdbImport	113
ProteoMM	77
artMS	79
COCOA	68
RNASeqR	8
HiCBricks	151
plpe	0
rbgl	1
tkwidgets	1
genomicfeatures	1
deco	10
seqlogo	0
DelayedDataFrame	64
TissueEnrich	156
iSEE	465
rWikiPathways	390
DropletUtils	2613
omicplotR	59
iCNV	53
kissDE	59
SEPIRA	27
SparseSignatures	55
DominoEffect	57
MetID	54
onlineFDR	46
SIAMCAT	113
ccfindR	91
GeneAccord	8
hierinf	44
tximeta	1144
countsimQC	139
levi	45
PrecisionTrialDrawer	7
topgo	0
RGMQL	49
GSEABenchmarkeR	81
CytoDx	68
PowerExplorer	7
ChIPSeqSpike	9
Rgin	7
martini	55
Trendy	58
RcisTarget	838
mdp	56
kmknn	0
RNAdecay	38
GDSArray	132
coRdon	170
HPAanalyze	124
NormalyzerDE	160
OMICsPCA	61
FCBF	44
LoomExperiment	591
IsoCorrectoR	98
MTseeker	3
snpmatrix	1
powerTCR	382
roma	1
Sconify	54
DEsingle	247
diffcyt	351
hmdbQuery	71
tRNAscanImport	74
BiocVersion	58754
plyranges	1242
TCGAutils	835
maser	122
netSmooth	61
TxRegInfra	7
OUTRIDER	208
Ularcirc	63
GIGSEA	45
ACE	87
strandCheckR	52
ERSSA	49
transite	55
universalmotif	515
glmSparseNet	138
bayNorm	80
abseqR	56
KinSwingR	54
MSstatsTMT	280
genomicranges	0
scTensor	123
decompTumor2Sig	128
DNABarcodeCompatibility	45
ADAM	114
degseq	1
IsoCorrectoRGUI	60
DEScan2	65
seqsetvis	65
TFutils	75
ChIC	19
MACPET	9
vidger	97
SDAMS	54
diffcoexp	176
missRows	50
GARS	58
GateFinder	59
INDEED	46
qPLEXanalyzer	71
condcomp	3
SCBN	80
REBET	45
multiHiCcompare	181
BiocNeighbors	10285
tRNA	140
mixOmics	2831
PepsNMR	118
pkgdeptools	0
omicRexposome	56
iteremoval	8
drawProteins	185
GDCRNATools	297
MDTS	46
CTDquerier	53
DEComplexDisease	10
adaptest	6
BEARscc	54
IMMAN	49
TTMap	47
NBSplice	10
OmaDB	191
RandomWalkRestartMH	110
BiocOncoTK	75
mlm4omics	3
iasva	49
EnhancedVolcano	4249
MetNet	52
brainImageR	2
nuCpos	50
XINA	44
FoldGO	30
breakpointR	61
QSutils	64
Wrench	1649
BDMMAcorrect	35
cTRAP	61
ExCluster	44
AffiXcan	55
edger	1
cntools	0
gostats	1
bayseq	0
CellScore	51
scFeatureFilter	50
gsean	59
scmeth	69
ddPCRclust	71
ASICS	82
BiFET	57
BioNetStat	66
GeneStructureTools	77
ORFik	204
slinky	6
sigFeature	207
sesame	659
gwasurvivr	83
FastqCleaner	81
icetea	54
BUScorrect	50
celaref	71
consensus	50
plotGrouper	49
primirTSS	58
BiocPkgTools	164
cicero	212
TimeSeriesExperiment	10
consensusDE	68
gpart	16
HIREewas	49
NeighborNet	24
AssessORF	54
logitt	1
category	1
rgraphviz	1
VCFArray	59
DeMixT	98
PoTRA	7
netboost	43
CellMixS	80
batchelor	3821
scMerge	494
scRecover	57
TOAST	384
qckitfastq	57
SpatialCPie	72
CNVRanger	125
miRspongeR	40
Autotuner	7
TNBC.CMS	52
epihet	9
SMAD	48
SQLDataFrame	50
AlphaBeta	55
RNAmodR	113
deltaCaptureC	48
idr2d	52
gramm4R	4
CNVfilteR	59
ASpediaFI	8
scPCA	89
HCAExplorer	3
RCM	62
BiocSingular	11977
fishpond	281
survtype	52
metagene2	67
proBatch	32
profileplyr	229
GNET2	52
scGPS	55
ngsReports	74
DiscoRhythm	62
alevinQC	84
Rcwl	104
Structstrings	157
SubCellBarCode	53
scBFA	56
MOSim	50
gpuMagic	50
SingleR	3868
brendaDb	51
RNAmodR.AlkAnilineSeq	60
muscat	419
CrossICC	3
biscuiteer	66
DMCFB	42
MMUPHin	114
scTGIF	139
mitch	65
arrayexpress	1
geometadb	0
CHETAH	98
MOFA	6
phemd	36
VennDetail	223
evaluomeR	50
qsmooth	129
TPP2D	52
Maaslin2	1011
bigPint	37
XCIR	5
SharedObject	150
ssPATHS	43
oppti	45
MACSQuantifyR	44
selectKSigs	48
onechannelgui	0
KnowSeq	57
celda	665
PrInCE	58
Rhisat2	219
PAIRADISE	80
CoRegFlux	3
Modstrings	210
infercnv	1062
pipeFrame	167
ssrch	78
RcwlPipelines	95
SpectralTAD	78
topconfects	168
PAST	46
adductomicsR	54
GenomicOZone	57
AWFisher	58
calm	44
SigsPack	50
debCAM	61
microbiomeDASim	56
pwrEWAS	29
methylCC	71
MSstatsSampleSize	21
flowSpy	4
MethCP	8
RNAsense	44
tradeSeq	501
cliqueMS	107
rsamtools	0
MetaVolcanoR	56
GAPGOM	8
HCABrowser	5
SynMut	47
mnem	152
OmicsLonDA	22
OVESEG	48
cytofast	6
sRACIPE	62
pathwayPCA	75
DepecheR	136
atSNP	70
animalcules	109
pram	47
proDA	232
sojourner	11
SCANVIS	59
circRNAprofiler	71
SAIGEgds	61
blacksheepr	58
gscreend	46
ReactomeGSA	221
arrayqualitymetrics	0
fcoex	76
flowSpecs	68
chippeakanno	0
brainflowprobes	49
BiocSet	241
geneticsbase	0
cummerbund	1
iterativebmasurv	0
CellBench	131
BioMM	21
RepViz	106
Melissa	50
graper	49
HiLDA	69
rmelting	67
cola	126
sitePath	56
enrichTF	69
SBGNview	157
StructuralVariantAnnotation	213
hypeR	79
dcanr	123
AMARETTO	117
MMAPPR2	18
gemini	51
IgGeneUsage	48
gseabase	0
VariantExperiment	49
fcScan	53
RNAmodR.ML	52
SEtools	130
MEB	49
ALPS	5
OmnipathR	521
LinkHD	48
GmicR	67
schex	230
scDblFinder	1392
DEWSeq	55
methrix	82
MBQN	53
ceRNAnetsim	47
CluMSID	66
projectR	109
CopyNumberPlots	152
lipidr	189
mbkmeans	448
nanotatoR	101
scAlign	16
RNAmodR.RiboMethSeq	55
GladiaTOX	47
BANDITS	107
divergence	44
TreeSummarizedExperiment	1565
NBAMSeq	84
HumanTranscriptomeCompendium	49
PhyloProfile	75
ncGTW	43
BUSpaRse	194
Spaniel	77
waddR	52
BioTIP	69
pulsedSilac	6
signatureSearch	218
netboxr	9
widgettools	1
biomart	0
scds	493
PCAtools	1181
ADAMgui	89
Xeva	59
doseR	47
APAlyzer	69
ViSEAGO	124
Qtlizer	50
lionessR	52
PERFect	40
target	47
GCSscore	24
peakPantheR	58
dearseq	165
rfaRm	43
rhdf5filters	18917
AnVIL	590
eisaR	106
methylSig	73
ROSeq	47
scTHI	45
structToolbox	105
spqn	47
DIAlignR	56
hummingbird	43
FScanR	23
PeacoQC	218
wpm	54
escape	341
SCATE	77
ANCOMBC	1229
Rfastp	137
uncoverappLib	55
FilterFFPE	46
tomoda	42
tidySingleCellExperiment	196
sigpathway	0
mina	44
bnem	59
BumpyMatrix	553
mumosa	71
parallel	1
tcltk	1
ttgsea	82
PoDCall	47
dpeak	24
ctgGEM	5
BgeeCall	48
DAMEfinder	56
TBSignatureProfiler	67
CARNIVAL	141
SimFFPE	43
weitrix	50
GGPA	45
peco	48
basilisk.utils	4195
RNAAgeCalc	70
metaseqR2	54
sparseMatrixStats	15488
cytomapper	315
combi	57
SpatialExperiment	1804
transomics2cytoscape	49
multiGSEA	108
RIPAT	26
simplifyEnrichment	744
QFeatures	1507
MouseFM	100
multicrispr	57
RadioGx	63
MultiBaC	65
metabolomicsWorkbenchR	78
UMI4Cats	57
facets	0
aggregateBioVar	69
dasper	18
omicsmarker	0
prostar	0
rlang	344
UTAR	0
AnVILBilling	51
bambu	281
ExperimentSubset	55
densvis	3110
CellaRepertorium	54
GWAS.BAYES	49
calib	0
AlpsNMR	65
base	1
brew	62
RColorBrewer	15
SplicingFactory	42
simpleSingleCell	0
CNVgears	28
grDevices	1
tidybulk	196
MsCoreUtils	3623
PubScore	5
SingleCellSignalR	254
vasp	3
scry	235
packFinder	52
BiocDockerManager	20
receptLoss	42
Dune	46
FRASER	109
TADCompare	79
Nebulosa	1006
BiocIO	19399
ISAnalytics	55
zellkonverter	1068
SPsimSeq	134
RegEnrich	101
idpr	67
scDataviz	80
Rtpca	45
rsemmed	44
vcfR	1
BSgenome.Hsapiens.UCSC.hg19	6
GSgalgoR	48
ChromSCape	66
VERSO	48
MSEADbi	4
NewWave	116
ADImpute	72
SpatialDecon	176
magrittr	22
flowGraph	50
KEGG.db	1
stats	1
graphat	1
datasets	1
grid	1
CoreGx	364
HIPPO	48
dittoSeq	1407
frenchFISH	42
ribosomeProfilingQC	79
CSSQ	48
tscR	19
ribor	47
spicyR	184
ROCpAI	43
glmGamPoi	3921
distinct	214
DegNorm	57
proActiv	62
ncRNAtools	48
pageRank	53
DEXICA	0
MSstatsTMTPTM	4
biocthis	224
MSPrep	106
megadepth	119
NanoMethViz	80
marr	45
famat	58
MSstatsConvert	484
dichromat	2
sendmailR	2
RLassoCox	50
PFP	16
scMAGeCK	8
MatrixGenerics	40002
easyreporting	52
cmapR	403
scHOT	65
scClassify	75
TreeAndLeaf	129
sarks	44
SCOPE	55
TAPseq	55
BRGenomics	148
GCSConnection	5
exomePeak2	101
rrvgo	442
struct	148
SynExtend	52
CiteFuse	91
PloGO2	65
BrainSABER	7
optimalFlow	57
ggtreeExtra	1018
HPAStainR	16
flowCut	103
pipeComp	52
VplotR	54
ResidualMatrix	3429
scCB2	53
Omixer	52
SeqGate	43
MethReg	68
preciseTAD	57
MSstatsPTM	198
GCSFilesystem	6
pga	0
hicbricks	0
microbiomeExplorer	74
BayesSpace	225
AnVILPublish	52
musicatk	78
SCFA	46
MOGAMUN	50
tidySummarizedExperiment	316
string	1
GO.db	15
Homo.sapiens	5
VarCon	43
GenomicDistributions	91
degraph	1
tools	1
utils	1
methods	1
biobtreeR	51
snapcount	56
netDx	47
clustifyr	136
EnMCB	51
reconsi	51
NoRCE	52
GeneTonic	258
EpiTxDb	84
sangeranalyseR	174
fmrs	117
Spectra	1569
corral	75
ToxicoGx	66
MesKit	69
HCAMatrixBrowser	3
CytoTree	15
periodicDNA	48
ILoReg	44
GenomeInfoDbData	20
PhosR	102
org.Hs.eg.db	15
systemPipeShiny	60
customCMPdb	53
rstudio	1
labeling	140
moanin	120
geneLenDataBase	10
hgu133plus2.db	7
ReactomeContentService4R	103
splines	1
stats4	1
compiler	1
NPARC	54
ExploreModelMatrix	153
timeOmics	71
cBioPortalData	439
rSWeeP	46
OpenStats	48
LACE	110
gmoviz	52
MEAT	45
scuttle	9809
GWENA	178
infinityFlow	67
snifter	136
GSEAmining	63
padma	45
TileDBArray	55
POMA	76
TimiRGeN	61
recountmethylation	63
velociraptor	118
rnaEditr	50
lefser	576
Informeasure	39
cindex	0
spatialHeatmap	154
cfDNAPro	56
affio	0
BSgenome.Hsapiens.UCSC.hg38	11
censcyt	58
graphics	1
GEOfastq	67
nempi	58
CAEN	44
iSEEu	114
MicrobiotaProcess	501
pmp	118
randRotation	43
basilisk	4639
regutools	60
MOMA	55
CeTF	81
GPA	51
bluster	4992
rebook	171
getDEE2	48
msImpute	114
nearBynding	49
scRepertoire	387
scp	128
MOFA2	443
ga4ghclient	0
metabCombiner	56
recount3	303
Herper	158
bitops	8
metapod	4721
PFAM.db	11
TxDb.Hsapiens.UCSC.hg19.knownGene	6
shinyepico	65
RiboDiPA	51
OSCA.basic	21
drugTargetInteractions	58
barcodetrackR	54
PhIPData	97
HubPub	116
diffUTR	49
awst	50
RCSL	35
interacCircos	61
autonomics	50
veloviz	48
scAnnotatR	127
VAExprs	44
svaRetro	58
ichorCNA	0
csawBook	4
coMethDMR	55
rprimer	72
ebimage	1
BOBaFIT	56
lisaClust	135
SOMNiBUS	55
systemPipeTools	50
cosmosR	65
DelayedRandomArray	90
mia	1460
POWSC	59
Rbec	53
sechm	151
ReactomeGraph4R	44
imcRtools	186
scShapes	45
ggspavis	147
MicrobiomeProfiler	104
cageminer	58
Cepo	161
mosbi	48
rGenomeTracks	40
deconvR	66
biodbLipidmaps	42
cliProfiler	48
ODER	14
genomicInstability	48
epistack	50
TargetDecoy	44
ggmanh	113
CNVMetrics	49
crisprBase	160
VGAM	15
mulcom	0
IlluminaHumanMethylation450kmanifest	5
GeomxTools	402
hca	65
MsBackendMassbank	75
ramr	45
fobitools	48
dir.expiry	4142
memes	184
miQC	108
MQmetrics	41
XNAString	50
vissE	97
planet	182
decoupleR	978
HGC	61
cyanoFilter	51
MungeSumstats	1006
GEOexplorer	61
BioPlex	4
m6Aboost	42
mitoClone2	56
pairkat	41
scanMiR	77
MsBackendRawFileReader	60
pengls	42
FindIT2	55
GeoDiff	76
DelayedTensor	50
biodbUniprot	50
biodbKegg	66
synapsis	42
BentoBox	0
hermes	91
netZooR	60
GBScleanR	43
SCArray	78
OSCA.advanced	19
dce	66
OSCA	5
CytoGLMM	97
treekoR	57
condiments	91
cbpManager	53
PhenoGeneRanker	41
wppi	46
BloodGen3Module	119
Travel	4
KBoost	44
MSstatsLOBD	47
sparrow	107
iPath	42
ProteoDisco	51
FLAMES	76
traviz	57
scTreeViz	49
methylclock	148
NxtIRFcore	16
spatialDE	103
MsBackendMgf	459
InteractiveComplexHeatmap	380
cellmigRation	47
DExMA	62
supersigs	42
conclus	6
methylscaper	51
midasHLA	53
rawrr	202
mirTarRnaSeq	62
tricycle	212
MACSr	104
CNViz	53
epidecodeR	46
epigraHMM	55
enhancerHomologSearch	56
Dino	55
segmenter	55
transformGamPoi	69
MSstatsLiP	74
nullranges	163
biodbHmdb	59
txcutr	45
TrajectoryUtils	1867
CelliD	251
msqrob2	116
BioNERO	256
CONSTANd	49
SingleMoleculeFootprinting	52
NanoStringNCTools	391
ORFhunteR	52
MatrixQCvis	117
HiCDCPlus	77
spiky	45
fgga	48
CIMICE	51
quantiseqr	444
fedup	50
scClassifR	3
FEAST	113
TrajectoryGeometry	40
GenomicSuperSignature	56
multiSight	69
geva	43
Summix	39
orthogene	327
ggmsa	512
NeuCA	36
BUSseq	48
dStruct	46
surfaltr	44
OSCA.workflows	37
OSCA.intro	61
NanoTube	82
spatzie	47
svaNUMT	57
scanMiRApp	58
RLSeq	36
scatterHatch	41
netOmics	40
RiboCrypt	51
metapone	64
CyTOFpower	52
benchdamic	86
sccomp	95
BSgenome.Hsapiens.NCBI.GRCh38	1
clusterprofiler	1
KaryoploteR	0
TraRe	6
MAGAR	170
sitadela	47
miloR	267
MetaboCoreUtils	1337
airpart	57
immunotation	50
LRcell	50
biodb	195
satuRn	266
MsFeatures	1705
mistyR	87
plotgardener	337
easier	134
tripr	48
bugsigdbr	166
scReClassify	45
atena	110
miaSim	97
targetsearch	0
bayespeak	0
mfuzz	0
ScaledMatrix	11879
VaSP	57
InterCellar	76
IRISFGM	78
ppcseq	48
ComPrAn	43
granulator	117
miaViz	244
PDATK	83
ptairMS	49
DeepPINCS	81
epialleleR	57
tLOH	46
ModCon	42
biodbChebi	83
BindingSiteFinder	56
csdR	46
HPiP	50
MAI	55
tanggle	62
SingleRBook	3
rmspc	54
CellBarcode	63
monaLisa	131
microbiomeMarker	376
cytoKernel	45
Cogito	47
TRESS	96
OSCA.multisample	21
CompoundDb	332
PanomiR	65
ASURAT	63
single	42
mbOmic	15
MuData	56
BiocBaseUtils	5497
MASS	235
Matrix	318
memoise	16
packrat	36
rsconnect	48
plyr	132
webshot	30
BiocManager	205
gtable	145
RedisParam	43
recipes	57
ipred	32
phenomis	55
expm	17
scMET	49
evaluate	294
checkmate	147
htmltools	283
omada	40
globals	34
sparklyr	12
bookdown	38
tidytree	42
devtools	36
bench	1
bpcp	1
hdrcde	6
colorRamps	10
IlluminaHumanMethylationEPICanno.ilm10b4.hg19	5
CBPS	1
Exact	1
MCMCglmm	1
MCMCpack	2
RcppAnnoy	40
FlowSorted.CordBloodCombined.450k	10
org.Rn.eg.db	10
ccdata	10
lsa	8
susieR	20
coloc	19
JASPAR2020	6
Rsolnp	2
uwot	47
FDb.InfiniumMethylation.hg19	5
waiter	10
rpart	63
pkgload	225
FuseSOM	52
formatters	3
polysat	0
samr	6
MALDIquant	2
Markdown	0
webmockr	1
xaringanthemer	1
dittodb	1
fork	1
gamlss.dist	3
ggPMX	1
ipaddress	1
klaR	3
jsTreeR	1
interp	13
pins	34
pmtables	1
partitions	1
randtoolbox	1
paletteer	5
R.rsp	1
Rsmlx	1
reda	1
s2	51
spatialreg	1
spaMM	1
spam	5
terra	41
RAthena	12
RPostgres	23
leaps	1
geosphere	12
odbc	22
paws.security.identity	14
rematch2	1
enc	0
extraTrees	0
rJava	52
subselect	1
superpc	1
paws.cost.management	14
SparseM	6
dtw	1
ggsignif	9
here	2
PMCMRplus	2
qgam	1
qrnn	1
RNeXML	1
servr	4
SOAR	0
startupmsg	0
spatstat.utils	19
stabs	1
tclust	1
trust	0
tseriesChaos	0
visNetwork	3
xlsxjars	1
abc.data	0
admixtools	0
afex	1
AlgDesign	2
bayesm	9
BayesianTools	0
bedr	0
bigassertr	1
bigsnpr	0
Boruta	0
cgdsr	1
calibrate	1
chemometrics	1
clustree	1
collections	1
xaringanExtra	1
sticky	1
raster	31
rj.gd	1
easypar	0
ggforestplot	0
peakPick	0
signature.tools.lib	0
unbalanced	0
WGSmapp	0
aplot	35
bayesplot	12
bigrquery	17
gWidgets2tcltk	0
CompQuadForm	1
correlation	1
diagram	1
doRNG	3
diveRsity	0
EasyABC	0
elliptic	1
ergm.count	0
fdrtool	2
future.apply	112
fracdiff	3
gclus	1
gamlss.data	1
gdistance	0
GillespieSSA	0
glmmML	1
GUTS	0
GSA	1
imagerExtra	0
intervals	4
jiebaR	0
labdsv	1
mboost	2
MIIVsem	0
mltools	0
network	2
np	0
operator.tools	1
pan	1
penalized	1
curatedMetagenomicData	0
restfulr	9
purr	0
future.callr	3
keyring	6
padr	1
units	56
proj4	19
shinySelect	0
quarto	5
rvg	1
npde	1
riskRegression	1
pkgcache	10
amgen.okta.client	1
reshape	2
findpython	12
esquisse	3
dotCall64	7
brms	1
lgr	1
Runuran	1
kpmt	0
extraChIPs	68
biodbNci	45
terraTCGAdata	52
cytoMEM	91
DepInfeR	45
zenith	134
blob	90
tidyr	135
plotly	134
sfsmisc	4
HandTill2001	1
gplots	60
Voyager	100
HiContacts	105
survMisc	2
proteasy	28
hms	79
scBubbletree	50
knitr	258
highr	59
katdetectr	55
magrene	45
ggtreeDendro	60
goSorensen	52
octad	55
epistasisGA	43
shinyjs	5
assertive.properties	10
furrr	14
fansi	220
scales	101
nloptr	25
desc	112
sessioninfo	18
remotes	91
SPIAT	106
regioneReloaded	47
mice	14
ggpointdensity	6
blme	6
Illumina450ProbeVariants.db	1
readr	96
Cubist	1
truncnorm	4
NADA	6
Rfast	16
isva	6
randomcoloR	6
agricolae	8
docopt	6
sparsesvd	18
Signac	11
cardelino	61
cxAnalysis	0
Rcgmin	1
Rdpack	44
SuperLearner	1
asht	1
formatR	31
gsmoothr	5
R.devices	8
codetools	46
simpleSeg	69
perm	8
openssl	295
RcppParallel	17
bit64	11
bit	59
campsismod	1
deSolve	24
epiR	3
evd	1
forecast	5
lpSolveAPI	1
multcomp	48
precommit	1
pdftools	8
profile	0
prismatic	1
pointblank	1
rhub	3
rclipboard	5
roxygen2	98
sensitivity	1
tweenr	16
tracee	1
statmod	3
vaultr	1
RandomFields	0
RandomFieldsUtils	0
BMA	1
stringdist	21
xmlparsedata	1
mlbench	13
loo	12
r2d3	1
rcdk	12
plotmo	1
yardstick	18
paws.storage	57
FNN	72
sp	90
corpcor	2
ncdf4	10
phylobase	1
polspline	3
PoissonSeq	0
rgexf	1
rentrez	1
RMTstat	1
rle	0
rlemon	1
RUnit	8
sampling	1
shinycssloaders	1
signature.tools.lib.v2.1	0
spatstat.geom	34
subplex	1
tensorA	9
TailRank	4
timereg	1
tsna	0
ucminf	2
worrms	1
wikitaxa	1
WikipediR	2
acepack	2
BayesFactor	2
bigmemory	1
BiasedUrn	14
bezier	1
bigreadr	0
bridgesampling	1
htmlwidgets	193
qcNvs	0
rrBLUP	1
clusthaplo	0
biganalytics	1
forestplot	1
AneuFinderData	0
BSgenome.Mmusculus.UCSC.mm9	0
gada	0
leafcutter	0
mobster	0
MutationTimeR	0
signature.tools.lib.back	0
sjPlot	1
vapour	0
DiceDesign	9
DiscriMiner	0
expsmooth	0
fma	0
gamlss.tr	0
ggvis	0
gllvm	0
h2o	4
hypergeo	1
HWxtest	0
janeaustenr	3
Iso	1
interpretR	0
KODAMA	0
LaplacesDemon	1
ks	6
languageserver	1
logspline	1
medflex	0
mitml	1
ncbit	0
mvabund	1
npsurv	1
oompaData	4
tfruns	14
N2R	0
tidyjson	0
gsrc	0
ASExtras4	0
wk	55
msigdbr	3
flowworkspace	0
planttfhunter	42
clusterprofielr	0
doBy	1
huxtable	2
NMdata	1
pagedown	1
timechange	89
rngWELL	1
rxode2et	1
nlmixr2data	1
vcr	1
pkgdepends	11
mclogit	1
org.Sc.sgd.db	1
rngtools	2
stringfish	6
pkgconfig	3
shape	35
circlize	32
conquer	2
gridtext	2
memisc	1
nonmemica	1
smoothHR	0
dtwclust	1
writexl	16
PKNCA	1
pd.atdschip.tiling	0
semsim	0
JADE	1
GOplot	0
rtkore	1
COTAN	70
protGear	53
rifi	39
sSNAPPY	102
omicsViewer	52
SpotClean	89
RAREsim	43
RolDE	49
cogeqc	68
vctrs	307
Rcpp	271
biodbExpasy	48
cluster	71
ddalpha	1
broom	93
libcoin	3
randomForest	3
caret	33
ModelMetrics	2
biodbNcbi	50
data.table	196
spaSim	58
GenomicInteractionNodes	48
reticulate	62
gert	61
rvest	73
paws.compute	17
gmp	16
sass	228
callr	124
farver	40
openxlsx	26
brave	1
fds	6
IlluminaHumanMethylationEPICanno.ilm10b2.hg19	6
xgboost	52
Ckmeans.1d.dp	1
NeuralNetTools	1
rsvd	9
GWASExactHW	5
org.Mm.eg.db	13
shinypanel	7
EnsDb.Hsapiens.v75	6
WGCNA	12
BioNAR	61
RcppTOML	17
ape	24
bdsmatrix	9
BBmisc	1
Brobdingnag	1
Bioconductor	1
TxDb.Mmusculus.UCSC.mm10.knownGene	6
R.filesets	8
mutoss	9
ps	208
ALL	11
posterior	12
shinyFiles	13
minpack.lm	4
sommer	1
prettyunits	158
dendextend	28
dockerfiler	1
drake	9
workflows	13
emayili	2
gld	1
ggraph	15
ggdag	1
insight	8
mlr3	2
palmerpenguins	1
R.cache	2
qs	6
quantreg	60
sm	1
rticles	1
sf	43
ISwR	1
Rtsne	22
flexmix	1
foreign	53
km.ci	2
logistf	12
segmented	18
microbenchmark	1
optparse	37
pwr	1
rstan	13
rstanarm	1
shinythemes	2
emdbook	12
paws	14
HDInterval	12
config	23
rex	17
git2r	21
ivpack	0
scRNAseq	1
shinyhelper	6
proto	1
progressr	44
R.matlab	0
repr	2
resample	0
rms	3
shapefiles	1
signal	1
SignifReg	0
soundecology	0
SNPlocs.Hsapiens.dbSNP151.GRCh38	0
spatstat.sparse	19
survivalROC	1
topicmodels	1
tmle	1
tsne	1
akima	1
adabag	1
base64	2
BDgraph	0
BeviMed	0
BCEE	0
bigparallelr	1
brglm	1
bmp	1
mi	0
expss	6
Matching	2
adegenet	1
graphql	1
dae	1
httptest	4
ctree	0
NoiseFiltersR	0
tkrgl	0
TxDb.Hsapiens.UCSC.hg38.knownGene	1
png	37
distributional	14
conditionz	1
compositions	2
cubelyr	0
cyclocomp	20
distrEx	0
DTRreg	0
extrafontdb	1
flexclust	1
gap	1
gap.datasets	1
GenSA	2
ggstatsplot	2
grpreg	1
ica	3
influenceR	2
irace	0
kedd	0
Lmoments	1
locfdr	0
lqa	0
meta	1
MetaSKAT	0
networkDynamic	1
oddsratio	0
pbdZMQ	2
pheatmap	1
pd.hg.u133.plus.2	0
pd.mouse430.2	0
dbscan	5
shadowtext	17
BioCGenerics	0
qualifier	0
phyclust	1
org.Ce.eg.db	1
bigD	1
eha	1
modelenv	1
mrgmisc	1
nlmixr2est	1
mrgvalprep	1
RcppDE	1
slickR	0
tidyvpc	1
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osqp	2
pingr	9
maps	10
GenomeInfoDB	0
kernlab	5
lsei	1
dparser	1
mapbayr	1
ggRandomForests	0
iml	0
RefManageR	1
templater	1
crisprScore	163
MetaboAnnotation	283
RCX	94
borealis	51
standR	116
updateObject	45
factR	53
DBI	180
tinytex	266
shiny	210
dplyr	236
generics	21
renv	145
CircSeqAlignTk	52
robustbase	27
gower	15
ggplot2	251
digest	287
e1071	49
inum	3
modelr	42
iterators	7
dimRed	1
consICA	105
biodbMirbase	34
CBEA	106
minqa	81
MSstatsShiny	101
fontawesome	111
dtplyr	42
readxl	87
commonmark	137
httr	183
demuxmix	219
ATACCoGAPS	45
IlluminaHumanMethylation450kanno.ilmn12.hg19	7
Lahman	1
ParamHelpers	0
RcppZiggurat	6
RcppHNSW	20
pRolocdata	10
mixsqp	21
TSP	18
egg	6
NMF	12
reldist	9
signifinder	53
RWiener	1
aldvmm	1
C50	1
snow	11
aroma.core	8
SeuratObject	32
processx	218
admisc	22
ggfun	43
patchwork	56
nnet	64
testthat	228
NetActivity	43
purrr	136
RCurl	120
ellipsis	14
ragg	129
duckdb	2
cobalt	2
collapse	1
datawizard	5
clock	20
graphlayouts	36
ymlthis	0
fields	5
lbfgs	1
nleqslv	1
RApiSerialize	6
projpred	1
saemix	1
rgl	3
rstpm2	1
tune	14
tidygraph	25
TMB	33
tidyposterior	1
RcppProgress	1
spatial	38
lintr	49
mclust	12
pander	3
party	9
styler	67
pryr	13
pscl	1
promises	143
fastmap	90
RcppEigen	122
utf8	207
cachem	156
locfit	61
kegggraph	0
RcppRoll	1
rda	0
sem	0
SimSeq	0
spatstat.core	14
stopwords	1
uroot	0
ABSOLUTE	0
audio	1
BB	1
bartMachine	1
BayesPen	0
biom	0
bridgedist	0
ComICS	0
crrri	0
superheat	1
ggExtra	4
gaston	1
gargle	78
rj	1
aws.s3	6
ash	6
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NNLM	1
pctGCdata	0
SPACox	0
sROC	0
TCGAbiolinksGUI.data	1
conflicted	14
contfrac	1
deal	0
DiagrammeR	4
distillery	0
dummies	0
fitdistrplus	19
fossil	0
gamlss	2
GPfit	1
heatmap3	0
ineq	0
IDPmisc	3
lda	0
longmemo	0
magick	13
mediation	1
msm	6
NLP	0
Palimpsest	0
pastecs	0
pbivnorm	1
phytools	4
igraph	148
Matrix.utils	1
speckle	153
filelock	56
scam	1
lixoftConnectors.2	0
datapipeline	1
XVectorb	0
SBGNview.data	1
org.Bt.eg.db	1
org.Gg.eg.db	1
org.Cf.eg.db	1
org.Dr.eg.db	1
flowWorkspaceData	1
SingleCelLExperiment	0
DEoptim	1
jpeg	11
juicyjuice	1
GPArotation	21
nanotime	1
rmutil	0
log4r	3
XLConnect	1
nlmixr2lib	1
ggbeeswarm	4
webfakes	1
NMcalc	1
modeltools	1
apcluster	1
multidplyr	0
castor	2
hgug4112a.db	0
nanostringr	1
StanHeaders	14
DEoptimR	26
fixest	1
bayestestR	3
gsDesign	1
mlr	1
JuliaCall	0
scatterplot3d	25
vegan	5
babelgene	4
TEKRABber	100
rgoslin	63
TREG	44
MBECS	62
fastreeR	72
nnSVG	101
scDDboost	43
pareg	49
PSMatch	432
qmtools	50
comapr	58
CTSV	52
GenomAutomorphism	41
GRaNIE	140
glue	121
shinyBS	9
viridis	138
glmnet	22
cli	221
EasyCellType	54
iSEEhex	147
exactRankTests	2
TENxIO	50
crisprDesign	134
lubridate	81
yaml	137
SpliceWiz	82
crisprViz	114
car	37
maptools	19
DNAfusion	48
shinyjqui	1
future	130
latticeExtra	10
DT	191
paws.common	59
sn	13
umap	12
cpp11	201
viridisLite	103
xfun	302
credentials	39
gemma.R	57
MetaPhOR	55
rainbow	9
MatchIt	2
zCompositions	8
dqrng	38
EnsDb.Hsapiens.v86	6
qlcMatrix	14
PRROC	6
GenABEL	2
arm	1
bbmle	11
R.huge	6
metap	10
sctransform	17
venn	9
Formula	13
isoband	46
crayon	79
lifecycle	184
sys	147
hwriter	2
datamods	7
cmdstanr	1
cem	1
broom.helpers	5
clinPK	0
flexdashboard	2
Epi	1
xaringan	1
nhanesA	1
plumber	12
pkgdown	36
RMariaDB	8
systemfit	1
spData	10
tarchetypes	5
targets	6
tidymodels	15
timeDate	33
RJSONIO	15
SDMTools	1
seqminer	12
sandwich	8
inline	1
class	50
AER	1
mda	1
trimcluster	0
paws.application.integration	14
paws.networking	14
DRR	1
colourpicker	8
deldir	48
lpSolve	15
usethis	100
whisker	51
geoR	1
splancs	7
gmodels	2
glmnetUtils	10
tzdb	79
systemfonts	181
shinydashboardPlus	10
plot3Drgl	0
profileModel	1
pspline	1
RInside	0
Rserve	1
Rook	1
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lle	0
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yaImpute	1
rxode2parse	1
foghorn	1
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org.Ss.eg.db	1
scidb	1
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rapidjsonr	1
GetoptLong	2
rjson	12
gghighlight	1
matrixcalc	1
ggtext	2
mets	1
vegawidget	1
seurat	1
LinTInd	52
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UCell	1222
crisprBowtie	153
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ompBAM	102
xcore	46
tomoseqr	44
syntenet	123
nlme	190
httpuv	249
rmarkdown	261
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tidyselect	87
qap	11
lattice	161
eds	344
lazyeval	14
forcats	22
partykit	3
lava	44
DescTools	17
ATACseqTFEA	62
zoo	30
mime	25
xml2	173
clipr	20
HiCDOC	106
cellnoptr	0
deseq2	1
crisprVerse	69
BiocFHIR	46
XML	94
DMRcatedata	0
arrow	19
tibble	93
gdata	20
fda	9
BSgenome.Cfamiliaris.UCSC.canFam3	5
DBItest	1
MatrixModels	102
OncoBayes2	1
FlowSorted.Blood.EPIC	10
estimability	18
ggdendro	11
GenABEL.data	2
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AsioHeaders	4
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dm	1
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paws.machine.learning	14
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vroom	152
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tm	2
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abc	1
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TwoSampleMR	0
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distr	0
DPClust	0
feather	1
ffbase	0
ggm	1
hdf5r	6
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logcondens	1
longitudinal	0
metaplus	1
ordinal	2
ggridges	29
grr	1
RcppSpdlog	1
MsQuality	64
lixoftConnectors.1	0
scatterpie	16
pbapply	42
polyclip	73
clustermq	3
org.Dm.eg.db	1
org.At.tair.db	1
babelmixr2	1
assertr	2
badger	0
nlmixr2	1
learnr	5
pmforest	1
protolite	1
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rxode2random	1
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tensorflow	18
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irr	1
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PerformanceAnalytics	1
coda	16
GlobalOptions	1
lambda.r	1
n1qn1	1
RSEIS	7
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blockcluster	1
MSA2dist	127
lineagespot	47
MobilityTransformR	35
STdeconvolve	126
DifferentialRegulation	53
epimutacions	58
seqArchR	83
mgcv	228
RSQLite	162
rstudioapi	146
shinydashboard	3
seriation	19
geometry	1
magic	2
BH	144
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gtools	43
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scifer	53
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SpatialFeatureExperiment	152
htmlTable	22
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SUITOR	41
SimBu	61
lme4	113
waldo	153
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haven	95
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rrcov	18
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zip	140
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IlluminaHumanMethylationEPICmanifest	5
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ggseqlogo	14
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EnsDb.Hsapiens.v79	6
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ATE	1
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R.methodsS3	5
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BSgenome.Mmusculus.UCSC.mm10	7
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HERON	29
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erify	1
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pec	1
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circlesize	0
TNO	1
argusDS.DataValidation	1
sqldf	1
RLRsim	1
origami	1
spec	1
etm	1
profmem	1
GenomicDistributionsData	1
RSelenium	1
org.Pt.eg.db	1
DAISIE	1
IncidencePrevalence	1
DoEstRare	0
gsubfn	1
toOrdinal	1
settings	1
rslurm	1
msigdb	1
ICSNP	1
httput	1
pedigree	1
SOMbrero	1
RcppClassic	1
syuzhet	1
saseR	10
r	1
D0.db	0
PIPETS	9
PBSddesolve	1
ggtern	14
omnibus	1
biocroxytest	21
MonoPhy	1
TLMoments	1
tern.gee	1
GeDi	10
iSEEfier	10
Rhdf5	1
prettymapr	1
proteomixr	1
dataMaid	1
GraphGallery	1
SimDesign	1
ggraph2	1
devutils	1
rrsq	1
cyphr	1
treemapify	1
mlr3spatiotempcv	1
LinMod2	1
curatedTCGAData	1
mutationalpatterns	1
tradeseq	1
mctq	1
argusDS.data.visualisation	1
rMisbeta	1
coxphw	1
biostat3	1
daff	1
APCtools	1
Pirat	1
sdpR	1
00TABLE	1
wmtsa	1
translations	1
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R2admb	1
rearrr	1
sassy	1
angrycell	1
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protoarrayr	1
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egor	1
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radiant.data	1
CytoMDS	9
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RPresto	1
treeclimbR	10
scplot	1
ggvegan	1
hgu133plus2cdf	1
seqmagick	1
Banksy	26
tpSVG	9
pd.hta.2.0	1
BREW3R.r	8
iBreakDown	1
bcp	1
rbokeh	1
ggtreeSpace	9
ClustAll	8
cypress	9
RcppAlgos	1
PIUMA	8
UPDhmm	7
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DESEQ	1
binman	1
enrichPlot	1
redland	1
epiregulon.extra	8
ggwordcloud	1
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ips	1
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OHCA	1
base2grob	1
CMAverse	1
boomer	1
gameofthrones	1
PKreport	1
secretbase	1
configr	1
ggchicklet	1
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DataVisualizations	1
survex	1
reghelper	1
cellxgene.census	1
chromstaRData	1
ARRmData	1
decipher	1
bladderbatch	1
StatCharrms	1
EVMS	1
astsa	1
CoxPhLb	1
complexHeatmap	1
dcat	1
survClust	1
nestcolor	1
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parathyroidSE	1
genomationdata	1
gralarkivar	1
CAbiNet	1
notame	1
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sasLM	1
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BSgenome.Oaries.ENSEMBL.RambV2	1
bRacatus	1
InraeThemes	1
awsMethods	1
orderedlist	1
rrcovNA	1
errorlocate	1
easyalluvial	1
hoardr	1
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name	1
sdmpredictors	1
colMeans	1
vitae	1
textrecipes	1
tidyquant	1
namer	1
dapr	1
biocmanager	1
seqArray	1
leaflegend	1
faahKO	1
ggsankey	1
rubasic	1
GrafGen	8
methyLImp2	8
methodical	9
argusDS.database	1
santoku	1
tidypredict	1
smoothclust	9
modeltime.ensemble	1
randomcolor	1
iRanges	1
teal.reporter	1
FSA	1
kinship2	1
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olsrr	1
gdsx	1
relsurv	1
spocc	1
distory	1
54vectors	1
NetBID2	1
themeSanofi	1
digitalDLSorteR	1
monocle3	1
censored	1
argusDS.signal.dataprep	1
chanmetab	1
audited	1
ghpm	1
hydroPSO	1
logrrr	1
pspearman	1
unrtf	1
BE	1
rlistings	1
mlr3viz	1
rnaturalearthdata	1
radiant.model	1
rayimage	1
minfiData	1
genomationData	1
aneufinderdata	1
roleswitch	1
renderthis	1
sceptre	1
Boom	1
adjustedCurves	1
jskm	1
fable	1
ggdensity	1
zelusutils	1
GOdb	1
HSAUR	1
CopyhelpeR	1
coastr	1
Shinyusagelogr	1
Unicode	1
wrapr	1
d3treeR	1
BPSC	1
scImpute	1
faux	1
glmperm	1
patch	1
pdist	1
MCMCprecision	1
rmassbank	1
GastrographPackage	1
procs	1
ITKR	1
sradb	1
assertive.datetimes	1
consensusClustR	1
dynsbm	1
rgr	1
alphavantager	1
aditools	1
openeo	1
radiant	1
latentnet	1
lpridge	1
pedigreemm	1
refund	1
SurfR	8
fExtremes	4
transmogR	9
SpaceMarkers	9
knowYourCG	7
DALEX	1
ingredients	1
outliers	1
tsibbledata	1
VisiumIO	9
prompter	1
caretEnsemble	1
iNEXT	1
eulerr	1
greekLetters	1
MatrixExtra	1
zli	1
lbaQcCheck	1
HaploBlocker	1
uqot	1
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RDCOMClient	1
tibbke	1
GAMBLR.results	1
limpca	9
dwrPlus	1
argusDS.smoothers	1
DataExplorer	1
cronR	1
msatR	1
Rspectra	1
biotools	1
monkey	1
variantannotation	1
swamp	1
ggedit	1
QCvis	1
ggrap2	1
satchel	1
forestmodel	1
shinyauthr	1
argusDS.trading.optimization	1
mlr3tuningspaces	1
safeBinaryRegression	1
nestedcv	1
rayvertex	1
pasilla	1
FlowSorted.Blood.450k	1
bsts	1
ELMER.data	1
pipebind	1
ifultools	1
geeasy	1
breakpointRdata	1
SCENIC	1
oricvis	1
tidyproteomics	1
SeruatObject	1
dotplot	1
SAVER	1
SeuratWrapper	1
DiurnalMRI	1
installr	1
ipw	1
survMS	1
InformationValue	1
MKmisc	1
geojsonlint	1
SpatialEpi	1
Rcapture	1
tfse	1
poilog	1
interactomes	1
HPC.R.Utilities	1
nls2	1
basemaps	1
txdbmaker	313
kyotil	1
dar	10
mobileRNA	10
CaMutQC	8
gypsum	283
dinoR	8
UCSC.utils	3449
sketchR	10
teal.code	1
bettr	9
rbiopaxparser	1
systempiper	1
motifTestR	9
pwalign	538
MIRit	10
smartid	9
usdm	1
hypred	1
SpotSweeper	6
tidyCoverage	10
argusDS.UI	1
synapser	1
ginmappeR	8
protti	1
signac	1
ruODK	1
haplotrackR	1
ssh	1
graphiQs	1
epiregulon	8
HicAggR	8
misty	1
MendelianRandomization	1
genetics	1
date	1
mosaic	1
preprocessorCore	1
argusDS.S3	1
teal.builder.modules	1
httptest2	1
synbreed	1
shinipsum	1
bettermc	1
markovchain	1
metrumrg	1
PKPDdatasets	1
SASxport	1
dlm	1
argusDS.model.validation	1
taxonomizr	1
GSEAbase	1
fido	1
chipseeker	1
geneoverlap	1
karyoploter	1
aneufinder	1
ideoviz	1
BiplotML	1
rasterVis	1
rattle	1
riem	1
rnoaa	1
mlmm	1
clusterexperiment	1
DecisionCurve	1
snpar	1
PRISMselector	1
SCopeLoomR	1
googlesheets	1
rbioinfcookbook	1
sleuth	1
GAMBoost	1
tornado	1
simr	1
ResourceSelection	1
NACHO	1
fastqcr	1
rsparkling	1
poibin	1
VAM	1
iptmnetr	1
Synth	1
traits	1
primeviewprobe	1
teal.osprey	1
BiocFileCaches	1
fuzzySim	1
rspm	1
RProtoBuf	1
modEvA	1
shiny.fluent	1
simresults	1
TCGAplot	1
feasts	1
ergm.multi	1
tidySpatialExperiment	13
hypergate	1
vimp	1
scMultiSim	8
qicharts	1
DegCre	8
fairhub.r.client	1
spp	1
multistateQTL	8
spoon	9
dnet	1
tsoutliers	1
teal.logger	1
MAPFX	7
pinfsc50	1
findIPs	7
deeptime	1
gINTomics	6
SmartEDA	1
sctrnasform	1
microeco	1
clariomdhumancdf	1
teal.modules.sanofi	1
slopeR	1
TauStar	1
rlaR	1
battenberg	1
nanoarrow	1
rcpp	1
freetypeharfbuzz	1
pkgpub	1
ROI.plugin.glpk	1
rstanemax	1
XLConnectJars	1
patientProfilesVis	1
tern.mmrm	1
teal.slice	1
cols4all	1
SPP	1
shiny.semantic	1
BSgenome.Hsapiens.UCSC.hg38.dbSNP151.major	1
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macrophage	1
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noctua	1
BioBase	1
rmapshaper	1
beaver	1
rhtslib	2
bestglm	1
S4vectors	1
hdf4r	1
protViz	1
PathInterpolatR	1
prestor	1
scGSVA	1
nanopipeline	1
zingeR	1
oce	1
Rcmdr	1
rankprod	1
funkyheatmap	1
NanoStringNorm	1
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biomod2	1
SimInf	1
assertive.data.us	1
assertive.code	1
dblplyr	1
enmSdmX	1
mma	1
MeTPeak	1
CoordinateCleaner	1
oncomarkerbase	1
decoupler	1
tldrm	1
ore	1
crisprShiny	11
Rlabkey	1
rawDiag	5
metpath	1
OptiLCMS	1
rusinglecell	1
tidyomics	10
gmthemes	1
gamlss.add	1
l2p	1
utilsStuff	1
teal.data	2
RISCA	1
mycor	1
tiledb	1
ptw	1
mhsmm	1
regress	1
broomExtra	1
BayesPostEst	1
presser	1
tabulizerjars	1
pkglite	1
pbv	1
argusDS.gamboostLSS	1
fastmatrix	1
hdf5	1
structuralvariantannotation	1
gageData	1
adductData	1
ITALICSData	1
tester	1
parquetize	1
tidyHeatmap	1
EMVS	1
RNAmodR.Data	1
NCmisc	1
loupeR	1
immunarch	1
deconfectHelpers	1
V.PhyloMaker2	1
NORMT3	1
modetest	1
kutils	1
fANCOVA	1
aricode	1
ACTIONet	1
assertive.data	1
assertive.data.uk	1
reader	1
hugene10sttranscriptcluster.db	1
frictionless	0
bib2df	1
SSDM	1
ENMTools	1
mixture	1
VariantWarehouseBMS	1
powsimR	1
PLNmodels	1
iatlasGraphQLClient	1
bkbutils	1
WorldFlora	1
MGnifyR	10
schoolmath	1
scMitoMut	9
simPIC	8
velocyto.R	1
SeuratData	1
rvertnet	1
Pedixplorer	8
Rfast2	1
ROSE	1
tsibble	1
DeProViR	9
faers	10
SingleCellAlleleExperiment	10
berryFunctions	1
tidydr	1
HybridExpress	9
genomicRanges	1
ComplexUpset	1
refinr	1
readJDX	1
PupillometryR	1
ProgMan	1
mosaicData	1
envalysis	1
tuneRanger	1
paquet	1
nlmeODE	1
taskscheduleR	1
eq5d	1
excelR	1
maditr	1
od	1
godmode	1
XIFF	1
rsatscan	1
parcats	1
neo2R	1
rayrender	1
coverageview	1
JBrowseR	1
TimeProjection	1
MBESS	1
BoomSpikeSlab	1
altair	1
valr	1
tidyFlowCore	1
job	1
IlluminaHumanMethylationEPICv2manifest	1
QuantPsyc	1
dismo	1
gausscov	1
DECENT	1
spdata	1
OlinkAnalyze	1
R2GUESS	1
svMisc	1
Biostring	1
tabulizer	1
SCtools	1
mvpart	1
choroplethr	1
stdmchecks	1
assertive.reflection	1
primeviewcdf	1
rgnparser	1
wallace	1
ufs	1
spatsurv	1
text2vec	1
ecospat	1
rangeModelMetadata	1
ROCit	1
textfeatures	1