name.milesparker.epi.region
Class EpidemicPeriods

java.lang.Object
  extended by org.ascape.model.AscapeObject
      extended by org.ascape.model.Agent
          extended by org.ascape.model.LocatedAgent
              extended by org.ascape.model.Cell
                  extended by org.ascape.model.CellOccupant
                      extended by org.ascape.model.Scape
                          extended by name.milesparker.epi.region.Region
                              extended by name.milesparker.epi.region.EpidemicPeriods
All Implemented Interfaces:
java.io.Serializable, java.lang.Cloneable, java.lang.Iterable, java.util.Collection, java.util.EventListener, ControlListener, ScapeListener, Location, Node, SpaceContext, HasName, RandomFunctions, IGraphicsAdapted

public class EpidemicPeriods
extends Region

See Also:
Serialized Form

Nested Class Summary
 
Nested classes/interfaces inherited from class org.ascape.model.Scape
Scape.ConditionalIterator, Scape.DrawFeatureObservable
 
Field Summary
 
Fields inherited from class org.ascape.model.Scape
AGENT_ORDER, agentsPerIteration, ALL_AGENTS, CLEAR_STATS_RULE, COLLECT_STATS_RULE, COMPARE_ORDERED_QUALIFIERS, COMPLETE_TOUR, copyrightAndCredits, CREATE_GRAPHIC_VIEW_RULE, CREATE_RULE, CREATE_SCAPE_RULE, CREATE_VIEW_RULE, EXECUTE_RULES_RULE, INITIAL_RULES_RULE, initialRules, prototypeAgent, REPEATED_DRAW, RULE_ORDER, version
 
Fields inherited from class org.ascape.model.CellOccupant
PLAY_HOST_RULE, RANDOM_WALK_AVAILABLE_RULE
 
Fields inherited from class org.ascape.model.Cell
CALCULATE_NEIGHBORS_RULE, neighbors, PLAY_NEIGHBORS_RULE, PLAY_RANDOM_NEIGHBOR_RULE
 
Fields inherited from class org.ascape.model.LocatedAgent
agentSize, coordinate, MOVE_RANDOM_LOCATION_RULE, RANDOM_WALK_RULE, thisUpdate
 
Fields inherited from class org.ascape.model.Agent
DEATH_RULE, FISSIONING_RULE, FORCE_DIE_RULE, FORCE_FISSION_RULE, FORCE_MOVE_RULE, INITIALIZE_RULE, ITERATE_AND_UPDATE_RULE, ITERATE_RULE, METABOLISM_RULE, MOVEMENT_RULE, PLAY_OTHER, UPDATE_RULE
 
Fields inherited from class org.ascape.model.AscapeObject
ARBITRARY_SEED, name, PLATFORM_DEFAULT_COLOR, scape
 
Constructor Summary
EpidemicPeriods()
           
 
Method Summary
protected  City createCityPrototype()
          Create an instance of City that will be used to populate the cityScape.
 void createScape()
          Creates the members of Region.
 void createViews()
          Constructs the views for this scape.
 
Methods inherited from class name.milesparker.epi.region.Region
calculateTimeStep, clone, create2DViews, createChartViews, createGraphicViews, createGraphViews, getCaseMortalityRate, getChildren, getCityCount, getCityScape, getGraphicsAdapter, getInitialInfectionProbability, getMaxContactTransmissionProbability, getMaxPeriodAsymptomInfection, getMaxPeriodExposure, getMaxPeriodSymptomInfection, getMigrationProbability, getMinContactTransmissionProbability, getMinPeriodAsymptomInfection, getMinPeriodExposure, getMinPeriodSymptomInfection, getMovementProbability, getName, getRegionalLocationCount, getRegionalMap, getRegionalMapDimensions, getRegionalMapHeight, getRegionalMapWidth, getUID, isInitialCityAssigned, main, scapeSetup, setCaseMortalityRate, setCityCount, setInitialCityAssigned, setInitialInfectionProbability, setMaxContactTransmissionProbability, setMaxPeriodAsymptomInfection, setMaxPeriodExposure, setMaxPeriodSymptomInfection, setMigrationProbability, setMinContactTransmissionProbability, setMinPeriodAsymptomInfection, setMinPeriodExposure, setMinPeriodSymptomInfection, setMovementProbability, setRegionalLocationCount, setRegionalMap, setRegionalMapDimensions, setRegionalMapHeight, setRegionalMapWidth, startSimulationAgentChild
 
Methods inherited from class org.ascape.model.Scape
add, add, add, add, addAll, addDrawFeature, addInitialRule, addInitialRule, addRule, addRule, addScapeListener, addScapeListenerFirst, addStatCollector, addStatCollectorIfNew, addStatCollectors, addView, addView, addView, addViews, addViews, addViews, assignParameters, assignParameters, calculateDistance, calculateDistance, clear, construct, contains, containsAll, contentsToString, countWithin, createNonGraphicViews, createSelfView, createViews, environmentQuiting, execute, execute, executeOnMembers, executeOnMembers, executeOnMembers, executeOnMembers, executeOnRoot, executeOnRoot, find, findMaximum, findMaximum, findMaximumWithin, findMinimum, findMinimum, findMinimumWithin, findNearest, findRandom, findRandom, findRandom, findRandomCoordinate, findWithin, get, get, getAgentsPerIteration, getAllScapes, getCollectStats, getData, getDescription, getDrawFeatures, getDrawFeaturesObservable, getEnvironment, getExecutionOrder, getExecutionStyle, getExtent, getHome, getHTMLDescription, getInitialRules, getIteration, getIterationsPerRedraw, getModel, getPausePeriod, getPeriod, getPeriodDescription, getPeriodName, getPrototype, getPrototypeAgent, getRoot, getRules, getRunner, getScapeListeners, getSize, getSpace, getStartPeriod, getStatCollectors, getStopPeriod, getSuperScape, getThreadCount, getUIEnvironment, getUserEnvironment, hasWithin, initialize, isAllViewsUpdated, isAutoCreate, isCellsRequestUpdates, isEmpty, isGraphic, isHome, isLifeOfScape, isListenersAndMembersCurrent, isMembersActive, isMutable, isPaused, isPeriodic, isPopulateOnCreate, isRoot, isRunning, isScapeListener, isSerializable, isStartOnOpen, isUpdateNeeded, isValidPeriod, isViewSelf, iterator, listenerOrMemberUpdated, listenerUpdated, memberUpdated, moveAway, moveToward, newAgent, newAgent, notifyViews, notifyViews, populate, remove, remove, removeAll, removeDrawFeature, removeScapeListener, respondControl, respondDrawFeature, retainAll, retrieveAllAccessors, retrieveAllAccessorsOrdered, retrieveModelAccessorsOrdered, save, save, scapeAdded, scapeClosing, scapeDeserialized, scapeInitialized, scapeIterated, scapeIterator, scapeIterator, scapeIterators, scapeNotification, scapeRandomIterator, scapeRemoved, scapeStarted, scapeStopped, search, searchMax, searchMin, set, set, set, set, setAgentsPerIteration, setAutoCreate, setAutoRestart, setCellsRequestUpdates, setCollectStats, setCollectStats, setDescription, setEarliestPeriod, setExecutionOrder, setExecutionStyle, setExtent, setExtent, setExtent, setHome, setHTMLDescription, setInitialRules, setIterationsPerRedraw, setIterationsPerRedraw, setLatestPeriod, setMembersActive, setPaused, setPausePeriod, setPeriodic, setPeriodName, setPopulateOnCreate, setPrototypeAgent, setRunner, setRunning, setSerializable, setSize, setSpace, setStartOnOpen, setStartPeriod, setStopPeriod, setSuperScape, setThreadCount, setViewSelf, size, toArray, toArray, toString, withinIterator
 
Methods inherited from class org.ascape.model.CellOccupant
die, findAvailableNeighbors, findNearest, findNearest, findNearest, findNearest, findNearest, findNeighbors, findNeighborsOnHost, findRandomAvailableNeighbor, findRandomNeighbor, findRandomNeighborOnHost, findWithin, findWithin, findWithin, getCoordinate, getHostCell, getHostScape, leave, moveAway, moveTo, moveToRandomLocation, moveToward, playNeighbors, playRandomNeighbor, randomWalk, randomWalkAvailable, setHostCell, setHostScape
 
Methods inherited from class org.ascape.model.Cell
calculateNeighbors, countNeighbors, findOccupants, findRelative, getDistance, getNeighbors, getNeighbors, getNetwork, getOccupant, hostedCondition, isAvailable, removeOccupant, setNeighbors, setNeighborsList, setNetwork, setOccupant
 
Methods inherited from class org.ascape.model.LocatedAgent
calculateDistance, calculateDistance, countWithin, countWithin, countWithin, findMaximumWithin, findWithin, getAgentSize, hasWithin, hasWithin, hasWithin, isUpdateNeeded, moveAway, moveAway, moveTo, moveToward, moveToward, requestUpdate, requestUpdateNext, setAgentSize, setCoordinate
 
Methods inherited from class org.ascape.model.Agent
clearDeleteMarker, death, deathCondition, execute, execute, fission, fissionCondition, fissioning, getColor, getColor, getImage, getImage, getPlatformColor, isDelete, isInitialized, iterate, markForDeletion, metabolism, move, movement, movementCondition, play, scapeCreated, setInitialized, setScape, update
 
Methods inherited from class org.ascape.model.AscapeObject
diffDeep, diffDeep, diffDeepBFS, diffDeepDFS, diffDeepValidate, diffDeepVisit, equalsDeep, equalsDeep, equalsDeep, getComparisonStream, getRandom, getRandomSeed, getScape, randomInRange, randomInRange, randomIs, randomToLimit, reseed, setComparisonStream, setName, setRandom, setRandomSeed
 
Methods inherited from class java.lang.Object
equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
 
Methods inherited from interface java.util.Collection
equals, hashCode
 
Methods inherited from interface org.ascape.model.event.ScapeListener
getScape
 
Methods inherited from interface org.ascape.model.space.Location
clearDeleteMarker, isDelete, markForDeletion, setCoordinate
 

Constructor Detail

EpidemicPeriods

public EpidemicPeriods()
Method Detail

createCityPrototype

protected City createCityPrototype()
Description copied from class: Region
Create an instance of City that will be used to populate the cityScape. Overide to customize the prototype, for example to change the views created for a member scape.

Overrides:
createCityPrototype in class Region
Returns:
See Also:
name.milesparker.epi.region.Region#createCity()

createScape

public void createScape()
Description copied from class: Region
Creates the members of Region.

Overrides:
createScape in class Region
See Also:
Scape.setPopulateOnCreate(boolean)

createViews

public void createViews()
Description copied from class: Scape
Constructs the views for this scape. If display graphics is set to true, calls create graphic views. Calls create nongraphic views in either case. Override to create views for the scape. Alternativly, override the createGraphicsViews and createNonGraphicViews methods to create views appropriate for the current operating mode. This method does NOT get called when a model is deserialized, but createGraphicViews does.

Overrides:
createViews in class Scape