pappso::FastaOutputStream Class Reference

#include <fastaoutputstream.h>

Inheritance diagram for pappso::FastaOutputStream:

Public Member Functions
	FastaOutputStream (QTextStream &otxtstream)
	~FastaOutputStream ()
void	writeProtein (const Protein &protein) override

Private Attributes
QTextStream &	m_ofastastream

Detailed Description

Definition at line 28 of file fastaoutputstream.h.

Constructor & Destructor Documentation

FastaOutputStream()

pappso::FastaOutputStream::FastaOutputStream

(

QTextStream &

otxtstream

)

Definition at line 28 of file fastaoutputstream.cpp.

                                                            : m_ofastastream(otxtstream)
{
}

References m_ofastastream.

~FastaOutputStream()

pappso::FastaOutputStream::~FastaOutputStream

(

)

Definition at line 32 of file fastaoutputstream.cpp.

{
}

Member Function Documentation

writeProtein()

void pappso::FastaOutputStream::writeProtein ( const Protein & protein )

overridevirtual

Implements pappso::FastaWriterInterface.

Definition at line 37 of file fastaoutputstream.cpp.

{
 
  m_ofastastream << ">" << protein.getAccession() << " " << protein.getDescription() << Qt::endl;
  m_ofastastream << protein.getSequence() << Qt::endl;
}

References pappso::Protein::getAccession(), pappso::Protein::getDescription(), pappso::Protein::getSequence(), and m_ofastastream.

Member Data Documentation

m_ofastastream

QTextStream& pappso::FastaOutputStream::m_ofastastream

private

Definition at line 37 of file fastaoutputstream.h.

Referenced by FastaOutputStream(), and writeProtein().

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The documentation for this class was generated from the following files:

• pappsomspp/core/fasta/fastaoutputstream.h
• pappsomspp/core/fasta/fastaoutputstream.cpp