Last updated on 2025-11-22 09:49:58 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.68 | 238.22 | 250.90 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.22 | 274.97 | 285.19 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 70.00 | 267.40 | 337.40 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 82.00 | 336.78 | 418.78 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 25.00 | 189.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.55 | 253.78 | 269.33 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.55 | 304.46 | 319.01 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 17.00 | 272.00 | 289.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 188.00 | 209.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 22.00 | 336.00 | 358.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 230.00 | 256.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [91s/200s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.769, system: 0.112, elapsed: 5.973 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.851, system: 0.345, elapsed: 31.423 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.029, elapsed: 0.621 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.082, system: 0.280, elapsed: 9.992 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.007, elapsed: 0.324 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.730, system: 1.100, elapsed: 50.883 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.643, system: 0.067, elapsed: 3.523 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.896, system: 0.392, elapsed: 23.254 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.213, system: 0.033, elapsed: 0.458 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.511, system: 0.521, elapsed: 9.818 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.018, elapsed: 0.333 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.084, system: 1.315, elapsed: 39.294 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.828, system: 0.126, elapsed: 3.456 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.947, system: 0.430, elapsed: 19.125 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.020, elapsed: 0.284 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.177, system: 0.354, elapsed: 6.954 seconds]
Computing values for grid cells...
... done. [user: 0.201, system: 0.022, elapsed: 0.322 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.324, system: 0.350, elapsed: 1.890 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.372, system: 1.369, elapsed: 33.211 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.765, system: 0.095, elapsed: 4.052 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.639, system: 0.190, elapsed: 20.527 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.021, elapsed: 0.469 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.126, system: 0.302, elapsed: 8.451 seconds]
Computing values for grid cells...
... done. [user: 0.195, system: 0.009, elapsed: 0.443 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.991, system: 0.817, elapsed: 26.783 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.649, system: 1.548, elapsed: 62.580 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [89s/212s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.661, system: 0.065, elapsed: 3.494 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.841, system: 0.278, elapsed: 23.308 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.026, elapsed: 0.575 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.880, system: 0.262, elapsed: 9.199 seconds]
Computing values for grid cells...
... done. [user: 0.190, system: 0.013, elapsed: 0.424 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.376, system: 0.692, elapsed: 38.379 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.645, system: 0.064, elapsed: 3.746 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.824, system: 0.292, elapsed: 25.139 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.030, elapsed: 0.947 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.074, system: 0.364, elapsed: 11.207 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.007, elapsed: 0.364 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.543, system: 1.031, elapsed: 43.762 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.645, system: 0.055, elapsed: 3.724 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.763, system: 0.238, elapsed: 24.335 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.025, elapsed: 0.556 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.937, system: 0.335, elapsed: 10.824 seconds]
Computing values for grid cells...
... done. [user: 0.192, system: 0.014, elapsed: 0.507 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.183, system: 0.350, elapsed: 1.889 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.624, system: 1.089, elapsed: 43.631 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.671, system: 0.058, elapsed: 3.795 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.719, system: 0.207, elapsed: 25.390 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.040, elapsed: 0.718 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.028, system: 0.363, elapsed: 11.381 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.012, elapsed: 0.534 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.024, system: 0.824, elapsed: 28.099 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.599, system: 1.807, elapsed: 72.610 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64