## ----include = FALSE---------------------------------------------------------- knitr::opts_chunk$set( collapse = TRUE, comment = "#>" ) ## ----setup-------------------------------------------------------------------- library(scAnnotate) ## ----------------------------------------------------------------------------- data(pbmc1) data(pbmc2) ## ----eval=FALSE--------------------------------------------------------------- # ?pbmc1 # ?pbmc2 ## ----eval=FALSE--------------------------------------------------------------- # predict_label=scAnnotate(train=pbmc1, # test=pbmc2[,-1], # distribution="normal", # correction ="auto", # screening = "wilcox", # threshold=0, # lognormalized=TRUE) ## ----eval=FALSE--------------------------------------------------------------- # eva_cal(prediction = predict_label,cell_label = pbmc2[,1])