CRAN Package Check Results for Package qad

Last updated on 2025-09-28 09:49:55 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.5 21.67 165.57 187.24 ERROR
r-devel-linux-x86_64-debian-gcc 1.0.5 16.22 114.28 130.50 ERROR
r-devel-linux-x86_64-fedora-clang 1.0.5 285.79 ERROR
r-devel-linux-x86_64-fedora-gcc 1.0.5 286.85 ERROR
r-devel-windows-x86_64 1.0.5 30.00 169.00 199.00 ERROR
r-patched-linux-x86_64 1.0.5 21.70 153.49 175.19 ERROR
r-release-linux-x86_64 1.0.5 22.61 154.96 177.57 ERROR
r-release-macos-arm64 1.0.5 102.00 OK
r-release-macos-x86_64 1.0.5 142.00 OK
r-release-windows-x86_64 1.0.5 28.00 166.00 194.00 ERROR
r-oldrel-macos-arm64 1.0.5 92.00 OK
r-oldrel-macos-x86_64 1.0.5 136.00 OK
r-oldrel-windows-x86_64 1.0.5 36.00 216.00 252.00 ERROR

Check Details

Version: 1.0.5
Check: tests
Result: ERROR Running ‘testthat.R’ [13s/14s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(qad) > > test_check("qad") Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 1 4 2 I2 4 16 3 I3 16 36 4 I4 36 64 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 x1=1 1 0 0 0 x1=3 0 1 0 0 x1=5 0 0 1 0 x1=7 0 0 0 1 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -0.088328476 -0.032014822 2 I2 -0.032014822 0.003681438 3 I3 0.003681438 0.043419866 4 I4 0.043419866 0.082982960 5 I5 0.082982960 0.123291222 6 I6 0.123291222 0.157370208 7 I7 0.157370208 0.196094316 8 I8 0.196094316 0.251103114 9 I9 0.251103114 0.312673308 10 I10 0.312673308 0.411026240 11 I11 0.411026240 0.492993924 12 I12 0.492993924 0.582614401 13 I13 0.582614401 0.669112580 14 I14 0.669112580 0.814027716 15 I15 0.814027716 1.085679589 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 I12 I13 x1=0 0.44 0.14 0.24 0.18 0.00 0.00 0.00 0.0000000 0.0000000 0.00 0 0 0 x1=0.5 0.00 0.00 0.00 0.00 0.04 0.12 0.10 0.4400000 0.2400000 0.06 0 0 0 x1=-0.5 0.00 0.00 0.00 0.00 0.00 0.00 0.36 0.1933333 0.3266667 0.12 0 0 0 I14 I15 x1=0 0 0 x1=0.5 0 0 x1=-0.5 0 0 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.53644771 -0.97613465 2 I2 -0.97613465 -0.61074134 3 I3 -0.61074134 -0.43147819 4 I4 -0.43147819 -0.27153923 5 I5 -0.27153923 -0.05271212 6 I6 -0.05271212 0.06319971 7 I7 0.06319971 0.23246937 8 I8 0.23246937 0.54523701 9 I9 0.54523701 0.77681898 10 I10 0.77681898 1.14892515 11 I11 1.14892515 2.06120009 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0.22 0 0.11 0.15 0.07 0.03818182 0.03181818 0.11 0.11 0 0.16 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.3635900 -1.2514416 2 I2 -1.2514416 -1.0833448 3 I3 -1.0833448 -0.6090812 4 I4 -0.6090812 -0.2658806 5 I5 -0.2658806 -0.1705240 6 I6 -0.1705240 0.2096200 7 I7 0.2096200 0.5225125 8 I8 0.5225125 0.6219765 9 I9 0.6219765 0.7975903 10 I10 0.7975903 1.2699317 11 I11 1.2699317 3.1616994 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0 0.11 0 0.04 0.18 0.1427273 0.1372727 0 0.11 0.27 0.01 [1] "computation process..." [1] "computation process: 2 / 3" [1] "computation process: 3 / 3" p.values are adjusted by using the method fdr quantification of asymmetric dependencies: Sample Size: 100 Number of unique ranks: x1: 100 x2: 100 (x1,x2): 100 Resolution: 10 x 10 Dependence measures: q p.values q(x1,x2) 0.330 0.057 q(x2,x1) 0.233 0.697 max.dependence 0.330 0.108 a p.values asymmetry 0.097 NA [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-predict.R:42:3'): plot is returned by prediction ───────────── class(pred[[2]]) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:79:3'): heatmap.qad ──────────────────────────────────── class(qad::heatmap.qad(pw_fit, select = "dependence")) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:80:3'): heatmap.qad ──────────────────────────────────── class(...) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:24:3'): plot.qad ────────────────────────── class(plot(fit)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:25:3'): plot.qad ────────────────────────── class(plot(fit, addSample = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:26:3'): plot.qad ────────────────────────── class(plot(fit, copula = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:27:3'): plot.qad ────────────────────────── class(plot(fit, density = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:28:3'): plot.qad ────────────────────────── class(plot(fit, margins = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:29:3'): plot.qad ────────────────────────── class(plot(fit, panel.grid = FALSE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:33:3'): plot_density ────────────────────── class(plot_density(fit$mass_matrix)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.0.5
Check: tests
Result: ERROR Running ‘testthat.R’ [8s/11s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(qad) > > test_check("qad") Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 1 4 2 I2 4 16 3 I3 16 36 4 I4 36 64 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 x1=1 1 0 0 0 x1=3 0 1 0 0 x1=5 0 0 1 0 x1=7 0 0 0 1 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -0.09197007 -0.01867810 2 I2 -0.01867810 0.01600933 3 I3 0.01600933 0.04887969 4 I4 0.04887969 0.09454429 5 I5 0.09454429 0.12477041 6 I6 0.12477041 0.17946306 7 I7 0.17946306 0.25610005 8 I8 0.25610005 0.32437281 9 I9 0.32437281 0.40952402 10 I10 0.40952402 0.47743345 11 I11 0.47743345 0.56081000 12 I12 0.56081000 0.66863748 13 I13 0.66863748 0.80483976 14 I14 0.80483976 0.93735574 15 I15 0.93735574 1.07252426 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 I12 I13 I14 I15 x1=0 0.54 0.16 0.06 0.06 0.18 0.00 0.00 0.00 0.0 0.00 0 0 0 0 0 x1=0.5 0.00 0.00 0.00 0.00 0.00 0.00 0.16 0.32 0.4 0.12 0 0 0 0 0 x1=-0.5 0.00 0.00 0.00 0.00 0.00 0.04 0.16 0.32 0.3 0.18 0 0 0 0 0 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -4.29946898 -1.59147143 2 I2 -1.59147143 -1.12061014 3 I3 -1.12061014 -0.84251739 4 I4 -0.84251739 -0.52110371 5 I5 -0.52110371 -0.30641465 6 I6 -0.30641465 -0.08549488 7 I7 -0.08549488 0.29409623 8 I8 0.29409623 0.63860081 9 I9 0.63860081 0.98584220 10 I10 0.98584220 1.51050102 11 I11 1.51050102 2.42493101 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0.11 0.17 0.22 0 0.06 0.11 0 0.22 0 0 0.11 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.83499557 -1.47942920 2 I2 -1.47942920 -0.88989236 3 I3 -0.88989236 -0.48252104 4 I4 -0.48252104 -0.23750507 5 I5 -0.23750507 -0.04708006 6 I6 -0.04708006 0.10119896 7 I7 0.10119896 0.31677074 8 I8 0.31677074 0.64074352 9 I9 0.64074352 0.89286229 10 I10 0.89286229 1.14831844 11 I11 1.14831844 2.70356272 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0.06 0.11 0 0.17 0 0.22 0.11 0 0.2 0.13 2.220446e-16 [1] "computation process..." [1] "computation process: 2 / 3" [1] "computation process: 3 / 3" p.values are adjusted by using the method fdr quantification of asymmetric dependencies: Sample Size: 100 Number of unique ranks: x1: 100 x2: 100 (x1,x2): 100 Resolution: 10 x 10 Dependence measures: q p.values q(x1,x2) 0.270 0.378 q(x2,x1) 0.294 0.185 max.dependence 0.294 0.339 a p.values asymmetry -0.024 NA [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-predict.R:42:3'): plot is returned by prediction ───────────── class(pred[[2]]) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:79:3'): heatmap.qad ──────────────────────────────────── class(qad::heatmap.qad(pw_fit, select = "dependence")) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:80:3'): heatmap.qad ──────────────────────────────────── class(...) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:24:3'): plot.qad ────────────────────────── class(plot(fit)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:25:3'): plot.qad ────────────────────────── class(plot(fit, addSample = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:26:3'): plot.qad ────────────────────────── class(plot(fit, copula = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:27:3'): plot.qad ────────────────────────── class(plot(fit, density = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:28:3'): plot.qad ────────────────────────── class(plot(fit, margins = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:29:3'): plot.qad ────────────────────────── class(plot(fit, panel.grid = FALSE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:33:3'): plot_density ────────────────────── class(plot_density(fit$mass_matrix)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.0.5
Check: tests
Result: ERROR Running ‘testthat.R’ [19s/47s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(qad) > > test_check("qad") Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 1 4 2 I2 4 16 3 I3 16 36 4 I4 36 64 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 x1=1 1 0 0 0 x1=3 0 1 0 0 x1=5 0 0 1 0 x1=7 0 0 0 1 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -0.095137231 -0.043887874 2 I2 -0.043887874 0.002659854 3 I3 0.002659854 0.033888054 4 I4 0.033888054 0.067863912 5 I5 0.067863912 0.098625363 6 I6 0.098625363 0.136380137 7 I7 0.136380137 0.199759727 8 I8 0.199759727 0.262895386 9 I9 0.262895386 0.298703381 10 I10 0.298703381 0.370316518 11 I11 0.370316518 0.488019219 12 I12 0.488019219 0.686647998 13 I13 0.686647998 0.773293312 14 I14 0.773293312 0.872371354 15 I15 0.872371354 1.061097886 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 I12 I13 I14 I15 x1=0 0.38 0.12 0.08 0.3 0.12 0.00 0.00 0.00 0.00 0.00 0 0 0 0 0 x1=0.5 0.00 0.00 0.00 0.0 0.06 0.12 0.18 0.28 0.18 0.18 0 0 0 0 0 x1=-0.5 0.00 0.00 0.00 0.0 0.00 0.00 0.16 0.20 0.18 0.46 0 0 0 0 0 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.93746346 -1.18367201 2 I2 -1.18367201 -0.80724852 3 I3 -0.80724852 -0.43666329 4 I4 -0.43666329 -0.14718523 5 I5 -0.14718523 -0.02770943 6 I6 -0.02770943 0.14689956 7 I7 0.14689956 0.56154183 8 I8 0.56154183 0.73646854 9 I9 0.73646854 1.13294508 10 I10 1.13294508 1.44956389 11 I11 1.44956389 2.78405538 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0 0 0.08 0.15 0.11 0 0 0.11 0.22 0.11 0.22 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.75854823 -1.43167562 2 I2 -1.43167562 -1.04073436 3 I3 -1.04073436 -0.72237382 4 I4 -0.72237382 -0.44056242 5 I5 -0.44056242 -0.23944874 6 I6 -0.23944874 -0.01931246 7 I7 -0.01931246 0.28476364 8 I8 0.28476364 0.66427638 9 I9 0.66427638 1.00718766 10 I10 1.00718766 1.47604653 11 I11 1.47604653 2.87840693 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0 0.11 0.1290909 0.1609091 0.02272727 0.08727273 0.05 0.22 0 0.1 0.12 [1] "computation process..." [1] "computation process: 2 / 3" [1] "computation process: 3 / 3" p.values are adjusted by using the method fdr quantification of asymmetric dependencies: Sample Size: 100 Number of unique ranks: x1: 100 x2: 100 (x1,x2): 100 Resolution: 10 x 10 Dependence measures: q p.values q(x1,x2) 0.2775 0.310 q(x2,x1) 0.2310 0.749 max.dependence 0.2775 0.499 a p.values asymmetry 0.0465 NA [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-predict.R:42:3'): plot is returned by prediction ───────────── class(pred[[2]]) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:79:3'): heatmap.qad ──────────────────────────────────── class(qad::heatmap.qad(pw_fit, select = "dependence")) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:80:3'): heatmap.qad ──────────────────────────────────── class(...) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:24:3'): plot.qad ────────────────────────── class(plot(fit)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:25:3'): plot.qad ────────────────────────── class(plot(fit, addSample = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:26:3'): plot.qad ────────────────────────── class(plot(fit, copula = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:27:3'): plot.qad ────────────────────────── class(plot(fit, density = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:28:3'): plot.qad ────────────────────────── class(plot(fit, margins = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:29:3'): plot.qad ────────────────────────── class(plot(fit, panel.grid = FALSE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:33:3'): plot_density ────────────────────── class(plot_density(fit$mass_matrix)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.0.5
Check: tests
Result: ERROR Running ‘testthat.R’ [19s/25s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(qad) > > test_check("qad") Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 1 4 2 I2 4 16 3 I3 16 36 4 I4 36 64 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 x1=1 1 0 0 0 x1=3 0 1 0 0 x1=5 0 0 1 0 x1=7 0 0 0 1 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -0.09516258 -0.03862239 2 I2 -0.03862239 0.03458622 3 I3 0.03458622 0.06551644 4 I4 0.06551644 0.09456571 5 I5 0.09456571 0.12625584 6 I6 0.12625584 0.16706794 7 I7 0.16706794 0.22155232 8 I8 0.22155232 0.32045365 9 I9 0.32045365 0.40051564 10 I10 0.40051564 0.46416305 11 I11 0.46416305 0.54033176 12 I12 0.54033176 0.61428162 13 I13 0.61428162 0.71731366 14 I14 0.71731366 0.84347808 15 I15 0.84347808 1.09321362 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 I12 I13 I14 I15 x1=0 0.48 0.28 0.12 0.06 0.06 0.00 0.00 0.00 0.00 0 0 0 0 0 0 x1=0.5 0.00 0.00 0.00 0.00 0.00 0.06 0.18 0.48 0.28 0 0 0 0 0 0 x1=-0.5 0.00 0.00 0.00 0.00 0.06 0.26 0.24 0.32 0.12 0 0 0 0 0 0 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.19137842 -1.12695052 2 I2 -1.12695052 -0.62811906 3 I3 -0.62811906 -0.41697202 4 I4 -0.41697202 -0.28350704 5 I5 -0.28350704 -0.12061352 6 I6 -0.12061352 0.02908693 7 I7 0.02908693 0.24857979 8 I8 0.24857979 0.56038981 9 I9 0.56038981 0.78624228 10 I10 0.78624228 1.35989715 11 I11 1.35989715 2.71247430 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0.33 0 0.01909091 0.1009091 0.05 0.17 0.22 0 0.11 0 0 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.7568447 -1.2723853 2 I2 -1.2723853 -0.9452424 3 I3 -0.9452424 -0.7419253 4 I4 -0.7419253 -0.5514552 5 I5 -0.5514552 -0.2675429 6 I6 -0.2675429 -0.1138264 7 I7 -0.1138264 0.1686010 8 I8 0.1686010 0.4108334 9 I9 0.4108334 0.6942796 10 I10 0.6942796 1.0024789 11 I11 1.0024789 2.1197492 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0.17 0.06 0.11 0.04 0.18 0 0 0.11 0.11 0.11 0.11 [1] "computation process..." [1] "computation process: 2 / 3" [1] "computation process: 3 / 3" p.values are adjusted by using the method fdr quantification of asymmetric dependencies: Sample Size: 100 Number of unique ranks: x1: 100 x2: 100 (x1,x2): 100 Resolution: 10 x 10 Dependence measures: q p.values q(x1,x2) 0.2565 0.496 q(x2,x1) 0.1710 0.988 max.dependence 0.2565 0.719 a p.values asymmetry 0.0855 NA [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-predict.R:42:3'): plot is returned by prediction ───────────── class(pred[[2]]) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:79:3'): heatmap.qad ──────────────────────────────────── class(qad::heatmap.qad(pw_fit, select = "dependence")) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:80:3'): heatmap.qad ──────────────────────────────────── class(...) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:24:3'): plot.qad ────────────────────────── class(plot(fit)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:25:3'): plot.qad ────────────────────────── class(plot(fit, addSample = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:26:3'): plot.qad ────────────────────────── class(plot(fit, copula = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:27:3'): plot.qad ────────────────────────── class(plot(fit, density = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:28:3'): plot.qad ────────────────────────── class(plot(fit, margins = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:29:3'): plot.qad ────────────────────────── class(plot(fit, panel.grid = FALSE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:33:3'): plot_density ────────────────────── class(plot_density(fit$mass_matrix)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 1.0.5
Check: tests
Result: ERROR Running 'testthat.R' [10s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(qad) > > test_check("qad") Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 1 4 2 I2 4 16 3 I3 16 36 4 I4 36 64 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 x1=1 1 0 0 0 x1=3 0 1 0 0 x1=5 0 0 1 0 x1=7 0 0 0 1 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -0.09055803 -0.01373834 2 I2 -0.01373834 0.03434538 3 I3 0.03434538 0.06691667 4 I4 0.06691667 0.09115947 5 I5 0.09115947 0.11652008 6 I6 0.11652008 0.15172392 7 I7 0.15172392 0.20398261 8 I8 0.20398261 0.28278059 9 I9 0.28278059 0.33640899 10 I10 0.33640899 0.42512916 11 I11 0.42512916 0.53074337 12 I12 0.53074337 0.63186963 13 I13 0.63186963 0.75480392 14 I14 0.75480392 0.85199665 15 I15 0.85199665 0.98343639 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 I12 I13 I14 I15 x1=0 0.24 0.3 0.36 0.1 0 0.00 0.00 0.00 0.00 0.0 0.00 0 0 0 0 x1=0.5 0.00 0.0 0.00 0.0 0 0.06 0.22 0.60 0.12 0.0 0.00 0 0 0 0 x1=-0.5 0.00 0.0 0.00 0.0 0 0.00 0.06 0.12 0.46 0.3 0.06 0 0 0 0 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.76704001 -1.45017837 2 I2 -1.45017837 -0.92591927 3 I3 -0.92591927 -0.67162918 4 I4 -0.67162918 -0.50367264 5 I5 -0.50367264 -0.26055162 6 I6 -0.26055162 -0.08115294 7 I7 -0.08115294 0.21379246 8 I8 0.21379246 0.39819817 9 I9 0.39819817 0.67836925 10 I10 0.67836925 1.14267798 11 I11 1.14267798 1.79213099 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0.16 0.11 0 0.11 0.07 0.11 0.11 0 0.22 0 0.11 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.45014153 -1.59322614 2 I2 -1.59322614 -0.76909968 3 I3 -0.76909968 -0.59015092 4 I4 -0.59015092 -0.35693682 5 I5 -0.35693682 -0.20720557 6 I6 -0.20720557 0.02771573 7 I7 0.02771573 0.35624839 8 I8 0.35624839 0.59241097 9 I9 0.59241097 0.83408320 10 I10 0.83408320 1.26546621 11 I11 1.26546621 2.16982325 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0.11 0 0.03 0.46 0.11 0 0 0.11 0.11 0.07 0 [1] "computation process..." [1] "computation process: 2 / 3" [1] "computation process: 3 / 3" p.values are adjusted by using the method fdr quantification of asymmetric dependencies: Sample Size: 100 Number of unique ranks: x1: 100 x2: 100 (x1,x2): 100 Resolution: 10 x 10 Dependence measures: q p.values q(x1,x2) 0.2565 0.508 q(x2,x1) 0.2115 0.865 max.dependence 0.2565 0.722 a p.values asymmetry 0.045 NA [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-predict.R:42:3'): plot is returned by prediction ───────────── class(pred[[2]]) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:79:3'): heatmap.qad ──────────────────────────────────── class(qad::heatmap.qad(pw_fit, select = "dependence")) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:80:3'): heatmap.qad ──────────────────────────────────── class(...) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:24:3'): plot.qad ────────────────────────── class(plot(fit)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:25:3'): plot.qad ────────────────────────── class(plot(fit, addSample = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:26:3'): plot.qad ────────────────────────── class(plot(fit, copula = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:27:3'): plot.qad ────────────────────────── class(plot(fit, density = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:28:3'): plot.qad ────────────────────────── class(plot(fit, margins = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:29:3'): plot.qad ────────────────────────── class(plot(fit, panel.grid = FALSE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:33:3'): plot_density ────────────────────── class(plot_density(fit$mass_matrix)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] Error: Test failures Execution halted Flavor: r-devel-windows-x86_64

Version: 1.0.5
Check: tests
Result: ERROR Running ‘testthat.R’ [12s/17s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(qad) > > test_check("qad") Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 1 4 2 I2 4 16 3 I3 16 36 4 I4 36 64 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 x1=1 1 0 0 0 x1=3 0 1 0 0 x1=5 0 0 1 0 x1=7 0 0 0 1 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -0.08580946 -0.02467170 2 I2 -0.02467170 0.02328497 3 I3 0.02328497 0.04966629 4 I4 0.04966629 0.08180995 5 I5 0.08180995 0.11600100 6 I6 0.11600100 0.16029138 7 I7 0.16029138 0.21806058 8 I8 0.21806058 0.26834768 9 I9 0.26834768 0.32482643 10 I10 0.32482643 0.43895365 11 I11 0.43895365 0.54537323 12 I12 0.54537323 0.59188398 13 I13 0.59188398 0.69662922 14 I14 0.69662922 0.87657646 15 I15 0.87657646 1.01281226 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 I12 I13 I14 I15 x1=0 0.16 0.24 0.06 0.42 0.12 0.00 0.00 0.00 0.00 0.00 0 0 0 0 0 x1=0.5 0.00 0.00 0.00 0.00 0.00 0.18 0.34 0.30 0.18 0.00 0 0 0 0 0 x1=-0.5 0.00 0.00 0.00 0.00 0.00 0.00 0.10 0.18 0.36 0.36 0 0 0 0 0 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.80595705 -1.20919503 2 I2 -1.20919503 -0.92715152 3 I3 -0.92715152 -0.55828763 4 I4 -0.55828763 -0.39293744 5 I5 -0.39293744 -0.17789657 6 I6 -0.17789657 -0.04675784 7 I7 -0.04675784 0.22327001 8 I8 0.22327001 0.38627803 9 I9 0.38627803 0.64991321 10 I10 0.64991321 1.31313990 11 I11 1.31313990 2.20781050 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0.07 0.11 0 0 0.22 0 0 0.11 0.16 0.22 0.11 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.0844515 -1.3350287 2 I2 -1.3350287 -0.7508031 3 I3 -0.7508031 -0.4182301 4 I4 -0.4182301 -0.2349027 5 I5 -0.2349027 -0.1387400 6 I6 -0.1387400 0.1141390 7 I7 0.1141390 0.3192492 8 I8 0.3192492 0.5672797 9 I9 0.5672797 0.7106835 10 I10 0.7106835 1.1833982 11 I11 1.1833982 2.3897308 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0 0 0.11 0.22 0.11 0.06 0.11 0.28 0.11 0 0 [1] "computation process..." [1] "computation process: 2 / 3" [1] "computation process: 3 / 3" p.values are adjusted by using the method fdr quantification of asymmetric dependencies: Sample Size: 100 Number of unique ranks: x1: 100 x2: 100 (x1,x2): 100 Resolution: 10 x 10 Dependence measures: q p.values q(x1,x2) 0.2160 0.859 q(x2,x1) 0.2175 0.844 max.dependence 0.2175 0.967 a p.values asymmetry -0.0015 NA [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-predict.R:42:3'): plot is returned by prediction ───────────── class(pred[[2]]) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:79:3'): heatmap.qad ──────────────────────────────────── class(qad::heatmap.qad(pw_fit, select = "dependence")) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:80:3'): heatmap.qad ──────────────────────────────────── class(...) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:24:3'): plot.qad ────────────────────────── class(plot(fit)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:25:3'): plot.qad ────────────────────────── class(plot(fit, addSample = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:26:3'): plot.qad ────────────────────────── class(plot(fit, copula = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:27:3'): plot.qad ────────────────────────── class(plot(fit, density = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:28:3'): plot.qad ────────────────────────── class(plot(fit, margins = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:29:3'): plot.qad ────────────────────────── class(plot(fit, panel.grid = FALSE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:33:3'): plot_density ────────────────────── class(plot_density(fit$mass_matrix)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] Error: Test failures Execution halted Flavor: r-patched-linux-x86_64

Version: 1.0.5
Check: tests
Result: ERROR Running ‘testthat.R’ [12s/15s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(qad) > > test_check("qad") Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 1 4 2 I2 4 16 3 I3 16 36 4 I4 36 64 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 x1=1 1 0 0 0 x1=3 0 1 0 0 x1=5 0 0 1 0 x1=7 0 0 0 1 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -0.08068156 -0.04792492 2 I2 -0.04792492 0.01659016 3 I3 0.01659016 0.05313701 4 I4 0.05313701 0.08477270 5 I5 0.08477270 0.11772080 6 I6 0.11772080 0.14113774 7 I7 0.14113774 0.17982553 8 I8 0.17982553 0.22914550 9 I9 0.22914550 0.31572772 10 I10 0.31572772 0.42355583 11 I11 0.42355583 0.52091433 12 I12 0.52091433 0.64828513 13 I13 0.64828513 0.76199583 14 I14 0.76199583 0.86186040 15 I15 0.86186040 1.06775637 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 I12 I13 x1=0 0.4 0.18 0.18 0.22 0.02 0.00 0.00 0.0000000 0.0000000 0.00 0 0 0 x1=0.5 0.0 0.00 0.00 0.00 0.00 0.00 0.24 0.2533333 0.3266667 0.18 0 0 0 x1=-0.5 0.0 0.00 0.00 0.00 0.10 0.06 0.10 0.3800000 0.2400000 0.12 0 0 0 I14 I15 x1=0 0 0 x1=0.5 0 0 x1=-0.5 0 0 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.74223922 -1.44029201 2 I2 -1.44029201 -0.96251504 3 I3 -0.96251504 -0.72361832 4 I4 -0.72361832 -0.45577377 5 I5 -0.45577377 -0.30898799 6 I6 -0.30898799 -0.12515169 7 I7 -0.12515169 0.07539244 8 I8 0.07539244 0.46871872 9 I9 0.46871872 0.92502140 10 I10 0.92502140 1.27890820 11 I11 1.27890820 2.88582023 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0.22 0.11 0.11 0.11 0 0.16 0.07 0.11 0.11 0 0 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.42922353 -1.49818123 2 I2 -1.49818123 -1.01055367 3 I3 -1.01055367 -0.49958045 4 I4 -0.49958045 -0.18616223 5 I5 -0.18616223 -0.04308362 6 I6 -0.04308362 0.06463989 7 I7 0.06463989 0.29537153 8 I8 0.29537153 0.64712239 9 I9 0.64712239 0.85066543 10 I10 0.85066543 1.21846656 11 I11 1.21846656 2.17540634 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0.22 0 0.11 0.11 0.16 0.06 0.16 0 0.07 0 0.11 [1] "computation process..." [1] "computation process: 2 / 3" [1] "computation process: 3 / 3" p.values are adjusted by using the method fdr quantification of asymmetric dependencies: Sample Size: 100 Number of unique ranks: x1: 100 x2: 100 (x1,x2): 100 Resolution: 10 x 10 Dependence measures: q p.values q(x1,x2) 0.243 0.625 q(x2,x1) 0.237 0.660 max.dependence 0.243 0.816 a p.values asymmetry 0.006 NA [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-predict.R:42:3'): plot is returned by prediction ───────────── class(pred[[2]]) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:79:3'): heatmap.qad ──────────────────────────────────── class(qad::heatmap.qad(pw_fit, select = "dependence")) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:80:3'): heatmap.qad ──────────────────────────────────── class(...) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:24:3'): plot.qad ────────────────────────── class(plot(fit)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:25:3'): plot.qad ────────────────────────── class(plot(fit, addSample = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:26:3'): plot.qad ────────────────────────── class(plot(fit, copula = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:27:3'): plot.qad ────────────────────────── class(plot(fit, density = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:28:3'): plot.qad ────────────────────────── class(plot(fit, margins = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:29:3'): plot.qad ────────────────────────── class(plot(fit, panel.grid = FALSE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:33:3'): plot_density ────────────────────── class(plot_density(fit$mass_matrix)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] Error: Test failures Execution halted Flavor: r-release-linux-x86_64

Version: 1.0.5
Check: tests
Result: ERROR Running 'testthat.R' [10s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(qad) > > test_check("qad") Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 1 4 2 I2 4 16 3 I3 16 36 4 I4 36 64 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 x1=1 1 0 0 0 x1=3 0 1 0 0 x1=5 0 0 1 0 x1=7 0 0 0 1 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -0.094461829 -0.004067891 2 I2 -0.004067891 0.037814584 3 I3 0.037814584 0.068078432 4 I4 0.068078432 0.097656224 5 I5 0.097656224 0.128772177 6 I6 0.128772177 0.168672861 7 I7 0.168672861 0.244175516 8 I8 0.244175516 0.300414127 9 I9 0.300414127 0.389574055 10 I10 0.389574055 0.460177898 11 I11 0.460177898 0.552925479 12 I12 0.552925479 0.662720776 13 I13 0.662720776 0.732094563 14 I14 0.732094563 0.866313263 15 I15 0.866313263 1.026361228 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 I12 I13 I14 I15 x1=0 0.28 0.2 0.2 0.26 0.06 0.00 0.00 0.00 0.00 0.00 0 0 0 0 0 x1=0.5 0.00 0.0 0.0 0.00 0.00 0.16 0.24 0.42 0.12 0.06 0 0 0 0 0 x1=-0.5 0.00 0.0 0.0 0.00 0.06 0.30 0.42 0.14 0.08 0.00 0 0 0 0 0 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.07008774 -1.26672118 2 I2 -1.26672118 -0.77663039 3 I3 -0.77663039 -0.40130084 4 I4 -0.40130084 -0.17335736 5 I5 -0.17335736 -0.04651974 6 I6 -0.04651974 0.15745678 7 I7 0.15745678 0.44218763 8 I8 0.44218763 0.68879865 9 I9 0.68879865 0.89474365 10 I10 0.89474365 1.18461012 11 I11 1.18461012 2.95987492 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0.27 0.22 0.03 0.08 0.11 1.110223e-16 0.11 0 0 0.07 0.11 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.729979690 -1.451904359 2 I2 -1.451904359 -0.959570604 3 I3 -0.959570604 -0.769480704 4 I4 -0.769480704 -0.482026664 5 I5 -0.482026664 -0.137955552 6 I6 -0.137955552 -0.003956687 7 I7 -0.003956687 0.151349895 8 I8 0.151349895 0.374942329 9 I9 0.374942329 0.655687546 10 I10 0.655687546 0.978488294 11 I11 0.978488294 2.818160007 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0 0 0.22 0.11 0.16 0.18 0 0.11 0 0 0.22 [1] "computation process..." [1] "computation process: 2 / 3" [1] "computation process: 3 / 3" p.values are adjusted by using the method fdr quantification of asymmetric dependencies: Sample Size: 100 Number of unique ranks: x1: 100 x2: 100 (x1,x2): 100 Resolution: 10 x 10 Dependence measures: q p.values q(x1,x2) 0.2708 0.383 q(x2,x1) 0.2500 0.573 max.dependence 0.2708 0.590 a p.values asymmetry 0.0208 NA [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-predict.R:42:3'): plot is returned by prediction ───────────── class(pred[[2]]) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:79:3'): heatmap.qad ──────────────────────────────────── class(qad::heatmap.qad(pw_fit, select = "dependence")) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:80:3'): heatmap.qad ──────────────────────────────────── class(...) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:24:3'): plot.qad ────────────────────────── class(plot(fit)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:25:3'): plot.qad ────────────────────────── class(plot(fit, addSample = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:26:3'): plot.qad ────────────────────────── class(plot(fit, copula = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:27:3'): plot.qad ────────────────────────── class(plot(fit, density = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:28:3'): plot.qad ────────────────────────── class(plot(fit, margins = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:29:3'): plot.qad ────────────────────────── class(plot(fit, panel.grid = FALSE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:33:3'): plot_density ────────────────────── class(plot_density(fit$mass_matrix)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] Error: Test failures Execution halted Flavor: r-release-windows-x86_64

Version: 1.0.5
Check: tests
Result: ERROR Running 'testthat.R' [14s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(qad) > > test_check("qad") Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 1 4 2 I2 4 16 3 I3 16 36 4 I4 36 64 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 x1=1 1 0 0 0 x1=3 0 1 0 0 x1=5 0 0 1 0 x1=7 0 0 0 1 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -0.09818948 -0.04144919 2 I2 -0.04144919 0.01810718 3 I3 0.01810718 0.06246399 4 I4 0.06246399 0.10806277 5 I5 0.10806277 0.14116962 6 I6 0.14116962 0.18968609 7 I7 0.18968609 0.24206004 8 I8 0.24206004 0.31289679 9 I9 0.31289679 0.39608857 10 I10 0.39608857 0.47150450 11 I11 0.47150450 0.58028519 12 I12 0.58028519 0.67143680 13 I13 0.67143680 0.80749935 14 I14 0.80749935 0.91387293 15 I15 0.91387293 1.06904478 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 I12 I13 x1=0 0.26 0.28 0.1 0.30000000 0.06000000 0.00 0.00 0.00 0.00 0 0 0 0 x1=0.5 0.00 0.00 0.0 0.06000000 0.00000000 0.12 0.24 0.44 0.14 0 0 0 0 x1=-0.5 0.00 0.00 0.0 0.02666667 0.07333333 0.12 0.34 0.28 0.16 0 0 0 0 I14 I15 x1=0 0 0 x1=0.5 0 0 x1=-0.5 0 0 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.9700255 -1.3507814 2 I2 -1.3507814 -1.0039971 3 I3 -1.0039971 -0.6883488 4 I4 -0.6883488 -0.5238063 5 I5 -0.5238063 -0.2561125 6 I6 -0.2561125 0.1239833 7 I7 0.1239833 0.3818603 8 I8 0.3818603 0.5983672 9 I9 0.5983672 0.9311694 10 I10 0.9311694 1.2622859 11 I11 1.2622859 2.0706833 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0 0.11 0.06 0 0.11 0.11 0.29 0.1 0 0.11 0.11 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.5521138 -1.1516032 2 I2 -1.1516032 -0.7287360 3 I3 -0.7287360 -0.5563357 4 I4 -0.5563357 -0.2636085 5 I5 -0.2636085 0.1231430 6 I6 0.1231430 0.2478548 7 I7 0.2478548 0.6062763 8 I8 0.6062763 0.7841014 9 I9 0.7841014 1.0717236 10 I10 1.0717236 1.3567182 11 I11 1.3567182 2.3067477 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0.28 0 0 0.17 0 0.11 0.11 0.11 0 0.11 0.11 [1] "computation process..." [1] "computation process: 2 / 3" [1] "computation process: 3 / 3" p.values are adjusted by using the method fdr quantification of asymmetric dependencies: Sample Size: 100 Number of unique ranks: x1: 100 x2: 100 (x1,x2): 100 Resolution: 10 x 10 Dependence measures: q p.values q(x1,x2) 0.2205 0.813 q(x2,x1) 0.2905 0.231 max.dependence 0.2905 0.385 a p.values asymmetry -0.07 NA [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-predict.R:42:3'): plot is returned by prediction ───────────── class(pred[[2]]) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:79:3'): heatmap.qad ──────────────────────────────────── class(qad::heatmap.qad(pw_fit, select = "dependence")) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:80:3'): heatmap.qad ──────────────────────────────────── class(...) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:24:3'): plot.qad ────────────────────────── class(plot(fit)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:25:3'): plot.qad ────────────────────────── class(plot(fit, addSample = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:26:3'): plot.qad ────────────────────────── class(plot(fit, copula = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:27:3'): plot.qad ────────────────────────── class(plot(fit, density = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:28:3'): plot.qad ────────────────────────── class(plot(fit, margins = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:29:3'): plot.qad ────────────────────────── class(plot(fit, panel.grid = FALSE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:33:3'): plot_density ────────────────────── class(plot_density(fit$mass_matrix)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] Error: Test failures Execution halted Flavor: r-oldrel-windows-x86_64