Last updated on 2025-11-23 12:49:54 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.68 | 238.22 | 250.90 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.61 | 235.05 | 245.66 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 70.00 | 267.40 | 337.40 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 82.00 | 336.78 | 418.78 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 25.00 | 189.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.55 | 253.78 | 269.33 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.21 | 251.43 | 266.64 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 22.00 | 331.00 | 353.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 186.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 25.00 | 366.00 | 391.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 226.00 | 249.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [99s/250s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.900, system: 0.182, elapsed: 4.527 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.201, system: 0.576, elapsed: 21.853 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.033, elapsed: 0.655 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.468, system: 0.532, elapsed: 13.923 seconds]
Computing values for grid cells...
... done. [user: 0.192, system: 0.020, elapsed: 0.610 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.714, system: 1.855, elapsed: 44.811 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.906, system: 0.181, elapsed: 5.723 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.324, system: 0.695, elapsed: 30.629 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.207, system: 0.032, elapsed: 0.323 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.539, system: 0.515, elapsed: 12.156 seconds]
Computing values for grid cells...
... done. [user: 0.199, system: 0.014, elapsed: 0.306 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.871, system: 1.808, elapsed: 51.669 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.711, system: 0.086, elapsed: 3.013 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.350, system: 0.737, elapsed: 22.482 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.219, system: 0.046, elapsed: 0.838 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.579, system: 0.586, elapsed: 17.190 seconds]
Computing values for grid cells...
... done. [user: 0.213, system: 0.045, elapsed: 1.319 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.454, system: 0.500, elapsed: 7.032 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.352, system: 2.552, elapsed: 55.528 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.716, system: 0.093, elapsed: 6.291 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.903, system: 0.330, elapsed: 29.819 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.218, system: 0.043, elapsed: 0.716 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.420, system: 0.425, elapsed: 12.737 seconds]
Computing values for grid cells...
... done. [user: 0.191, system: 0.010, elapsed: 0.439 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.539, system: 1.079, elapsed: 27.292 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 28.783, system: 2.349, elapsed: 80.610 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [97s/264s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.845, system: 0.096, elapsed: 5.276 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.221, system: 0.354, elapsed: 28.444 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.035, elapsed: 0.692 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.332, system: 0.532, elapsed: 14.963 seconds]
Computing values for grid cells...
... done. [user: 0.198, system: 0.013, elapsed: 0.651 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.555, system: 1.523, elapsed: 53.354 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.780, system: 0.097, elapsed: 5.547 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.247, system: 0.341, elapsed: 31.123 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.034, elapsed: 0.589 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.391, system: 0.538, elapsed: 13.466 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.013, elapsed: 0.609 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.569, system: 1.557, elapsed: 54.941 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.854, system: 0.117, elapsed: 5.369 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.197, system: 0.334, elapsed: 27.068 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.212, system: 0.036, elapsed: 0.696 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.268, system: 0.507, elapsed: 12.570 seconds]
Computing values for grid cells...
... done. [user: 0.206, system: 0.027, elapsed: 0.573 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.253, system: 0.384, elapsed: 2.288 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.864, system: 1.979, elapsed: 52.339 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.845, system: 0.106, elapsed: 5.203 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.086, system: 0.246, elapsed: 26.581 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.036, elapsed: 0.939 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.340, system: 0.421, elapsed: 14.168 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.010, elapsed: 0.625 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.815, system: 1.079, elapsed: 37.187 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 29.292, system: 2.238, elapsed: 88.000 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64