Last updated on 2025-12-05 11:51:52 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.27 | 250.38 | 264.65 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 9.87 | 219.52 | 229.39 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 31.00 | 284.18 | 315.18 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 39.00 | 322.78 | 361.78 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 18.00 | 184.00 | 202.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.70 | 287.77 | 303.47 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.30 | 269.49 | 283.79 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 14.00 | 180.00 | 194.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 187.00 | 208.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 197.00 | 208.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 236.00 | 261.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [88s/126s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.834, system: 0.098, elapsed: 3.177 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.930, system: 0.296, elapsed: 15.980 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.021, elapsed: 0.285 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.210, system: 0.310, elapsed: 6.594 seconds]
Computing values for grid cells...
... done. [user: 0.194, system: 0.014, elapsed: 0.278 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.935, system: 0.781, elapsed: 27.177 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.620, system: 0.039, elapsed: 1.731 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.875, system: 0.314, elapsed: 14.723 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.207, system: 0.020, elapsed: 0.406 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.371, system: 0.339, elapsed: 6.227 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.011, elapsed: 0.201 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.822, system: 0.769, elapsed: 24.062 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.607, system: 0.064, elapsed: 1.771 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.559, system: 0.292, elapsed: 10.742 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.208, system: 0.015, elapsed: 0.239 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.965, system: 0.232, elapsed: 4.774 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.005, elapsed: 0.307 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.246, system: 0.220, elapsed: 1.379 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.421, system: 0.880, elapsed: 20.112 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.660, system: 0.049, elapsed: 2.938 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.801, system: 0.181, elapsed: 16.306 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.012, elapsed: 0.273 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.130, system: 0.203, elapsed: 6.914 seconds]
Computing values for grid cells...
... done. [user: 0.192, system: 0.005, elapsed: 0.291 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.062, system: 0.529, elapsed: 19.008 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.716, system: 1.009, elapsed: 46.860 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/144s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.832, system: 0.094, elapsed: 2.997 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.751, system: 0.250, elapsed: 16.222 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.015, elapsed: 0.354 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.892, system: 0.262, elapsed: 6.831 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.008, elapsed: 0.284 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.388, system: 0.658, elapsed: 27.646 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.735, system: 0.074, elapsed: 2.563 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.929, system: 0.303, elapsed: 16.059 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.013, elapsed: 0.282 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.045, system: 0.262, elapsed: 5.942 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.008, elapsed: 0.327 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.651, system: 0.694, elapsed: 26.132 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.875, system: 0.106, elapsed: 2.985 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.039, system: 0.388, elapsed: 17.263 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.012, elapsed: 0.266 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.915, system: 0.239, elapsed: 8.698 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.011, elapsed: 0.349 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.219, system: 0.276, elapsed: 1.840 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.099, system: 1.096, elapsed: 32.617 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.580, system: 0.036, elapsed: 2.696 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.641, system: 0.093, elapsed: 18.240 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.014, elapsed: 0.348 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.821, system: 0.182, elapsed: 7.265 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.338 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.814, system: 0.494, elapsed: 18.836 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.886, system: 0.848, elapsed: 48.930 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64