Last updated on 2025-11-25 11:51:54 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.46 | 252.28 | 264.74 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.24 | 273.43 | 283.67 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 45.00 | 285.94 | 330.94 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 39.00 | 322.78 | 361.78 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 25.00 | 189.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.55 | 253.78 | 269.33 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.21 | 251.43 | 266.64 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 18.00 | 301.00 | 319.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 186.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 18.00 | 281.00 | 299.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 226.00 | 249.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [91s/228s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.615, system: 0.058, elapsed: 3.436 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.956, system: 0.241, elapsed: 22.239 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.209, system: 0.023, elapsed: 0.579 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.282, system: 0.331, elapsed: 10.987 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.009, elapsed: 0.469 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.891, system: 0.788, elapsed: 39.253 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.700, system: 0.070, elapsed: 3.221 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.808, system: 0.169, elapsed: 21.957 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.206, system: 0.019, elapsed: 0.525 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.466, system: 0.339, elapsed: 12.920 seconds]
Computing values for grid cells...
... done. [user: 0.190, system: 0.010, elapsed: 0.388 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.957, system: 0.638, elapsed: 40.240 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.834, system: 0.089, elapsed: 4.647 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.014, system: 0.221, elapsed: 22.585 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.017, elapsed: 0.490 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.343, system: 0.336, elapsed: 12.576 seconds]
Computing values for grid cells...
... done. [user: 0.190, system: 0.020, elapsed: 0.459 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.345, system: 0.336, elapsed: 2.547 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.624, system: 1.072, elapsed: 44.944 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.824, system: 0.106, elapsed: 4.171 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.884, system: 0.219, elapsed: 30.483 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.027, elapsed: 0.967 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.311, system: 0.292, elapsed: 16.127 seconds]
Computing values for grid cells...
... done. [user: 0.191, system: 0.007, elapsed: 0.567 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.614, system: 0.809, elapsed: 35.471 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 28.765, system: 1.513, elapsed: 90.568 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [94s/207s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.682, system: 0.054, elapsed: 3.075 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.419, system: 0.272, elapsed: 22.051 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.029, elapsed: 0.712 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.189, system: 0.325, elapsed: 9.343 seconds]
Computing values for grid cells...
... done. [user: 0.190, system: 0.013, elapsed: 0.340 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.314, system: 0.746, elapsed: 36.998 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.816, system: 0.106, elapsed: 3.712 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.501, system: 0.294, elapsed: 22.546 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.207, system: 0.022, elapsed: 0.492 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.254, system: 0.324, elapsed: 10.077 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.006, elapsed: 0.240 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.547, system: 0.820, elapsed: 38.528 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.864, system: 0.083, elapsed: 3.124 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.733, system: 0.397, elapsed: 27.943 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.206, system: 0.022, elapsed: 0.735 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.208, system: 0.361, elapsed: 17.327 seconds]
Computing values for grid cells...
... done. [user: 0.191, system: 0.012, elapsed: 0.657 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
2 1 4 3
... computing probabilities from permuted values ...
... done. [user: 1.175, system: 0.308, elapsed: 2.334 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.086, system: 1.317, elapsed: 54.416 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.794, system: 0.078, elapsed: 5.696 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.612, system: 0.424, elapsed: 25.628 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.206, system: 0.028, elapsed: 0.465 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.186, system: 0.358, elapsed: 9.381 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.007, elapsed: 0.491 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.454, system: 0.780, elapsed: 22.365 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 29.178, system: 1.858, elapsed: 65.957 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64