Last updated on 2026-01-08 11:49:07 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.2 | 35.34 | 317.69 | 353.03 | WARN | |
| r-devel-linux-x86_64-debian-gcc | 0.2 | 24.99 | 238.91 | 263.90 | WARN | |
| r-devel-linux-x86_64-fedora-clang | 3.0.0 | 60.00 | 483.74 | 543.74 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 3.0.0 | 59.00 | 497.91 | 556.91 | OK | |
| r-devel-windows-x86_64 | 0.2 | 39.00 | 262.00 | 301.00 | OK | |
| r-patched-linux-x86_64 | 0.2 | 34.24 | 301.21 | 335.45 | OK | |
| r-release-linux-x86_64 | 0.2 | 33.17 | 299.95 | 333.12 | OK | |
| r-release-macos-arm64 | 3.0.0 | 8.00 | 75.00 | 83.00 | OK | |
| r-release-macos-x86_64 | 3.0.0 | 21.00 | 147.00 | 168.00 | ERROR | |
| r-release-windows-x86_64 | 0.2 | 38.00 | 262.00 | 300.00 | OK | |
| r-oldrel-macos-arm64 | 3.0.0 | 2.00 | 9.00 | 11.00 | ERROR | |
| r-oldrel-macos-x86_64 | 3.0.0 | 23.00 | 301.00 | 324.00 | NOTE | |
| r-oldrel-windows-x86_64 | 0.2 | 51.00 | 351.00 | 402.00 | NOTE |
Version: 0.2
Check: CRAN incoming feasibility
Result: WARN
Maintainer: ‘Annice Najafi <annicenajafi27@gmail.com>’
Strong dependencies not in the CRAN or BioC software repositories:
org.Mm.eg.db, org.Hs.eg.db
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 3.0.0
Check: examples
Result: ERROR
Running examples in ‘SurprisalAnalysis-Ex.R’ failed
The error most likely occurred in:
> ### Name: runSurprisalApp
> ### Title: Launch the SurprisalAnalysis Shiny App
> ### Aliases: runSurprisalApp
>
> ### ** Examples
>
>
> runSurprisalApp(port = httpuv::randomPort(), run = FALSE)
Loading required package: shiny
Attaching package: ‘shinyjs’
The following object is masked from ‘package:shiny’:
runExample
The following objects are masked from ‘package:methods’:
removeClass, show
Attaching package: ‘DT’
The following objects are masked from ‘package:shiny’:
dataTableOutput, renderDataTable
clusterProfiler v4.15.1 Learn more at https://yulab-smu.top/contribution-knowledge-mining/
Please cite:
S Xu, E Hu, Y Cai, Z Xie, X Luo, L Zhan, W Tang, Q Wang, B Liu, R Wang,
W Xie, T Wu, L Xie, G Yu. Using clusterProfiler to characterize
multiomics data. Nature Protocols. 2024, 19(11):3292-3320
Attaching package: ‘clusterProfiler’
The following object is masked from ‘package:stats’:
filter
Loading required package: stats4
Loading required package: BiocGenerics
Loading required package: generics
Attaching package: ‘generics’
The following objects are masked from ‘package:base’:
as.difftime, as.factor, as.ordered, intersect, is.element, setdiff,
setequal, union
Attaching package: ‘BiocGenerics’
The following objects are masked from ‘package:stats’:
IQR, mad, sd, var, xtabs
The following objects are masked from ‘package:base’:
Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append,
as.data.frame, basename, cbind, colnames, dirname, do.call,
duplicated, eval, evalq, get, grep, grepl, is.unsorted, lapply,
mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int,
rank, rbind, rownames, sapply, saveRDS, table, tapply, unique,
unsplit, which.max, which.min
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material; view with
'browseVignettes()'. To cite Bioconductor, see
'citation("Biobase")', and for packages 'citation("pkgname")'.
Loading required package: IRanges
Loading required package: S4Vectors
Attaching package: ‘S4Vectors’
The following object is masked from ‘package:clusterProfiler’:
rename
The following object is masked from ‘package:utils’:
findMatches
The following objects are masked from ‘package:base’:
I, expand.grid, unname
Attaching package: ‘IRanges’
The following object is masked from ‘package:clusterProfiler’:
slice
Attaching package: ‘AnnotationDbi’
The following object is masked from ‘package:clusterProfiler’:
select
Error: Package 'org.Mm.eg.db' is required for this Shiny app. Install via BiocManager::install('org.Mm.eg.db')
Execution halted
Flavor: r-release-macos-x86_64
Version: 3.0.0
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘org.Mm.eg.db’
Flavor: r-oldrel-macos-arm64
Version: 3.0.0
Check: whether package can be installed
Result: ERROR
Installation failed.
Flavor: r-oldrel-macos-arm64
Version: 3.0.0
Check: installed package size
Result: NOTE
installed size is 8.7Mb
sub-directories of 1Mb or more:
doc 1.5Mb
extdata 4.0Mb
shiny 3.1Mb
Flavor: r-oldrel-macos-x86_64
Version: 0.2
Check: installed package size
Result: NOTE
installed size is 8.7Mb
sub-directories of 1Mb or more:
doc 1.5Mb
extdata 4.0Mb
shiny 3.1Mb
Flavor: r-oldrel-windows-x86_64