Last updated on 2026-02-27 09:50:57 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.0 | 3.61 | 49.51 | 53.12 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.1.0 | 3.48 | 37.46 | 40.94 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.1.0 | 7.00 | 73.54 | 80.54 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 0.1.0 | 88.22 | OK | |||
| r-devel-macos-arm64 | 0.1.0 | 1.00 | 22.00 | 23.00 | ERROR | |
| r-devel-windows-x86_64 | 0.1.0 | 6.00 | 68.00 | 74.00 | ERROR | |
| r-patched-linux-x86_64 | 0.1.0 | 4.52 | 44.31 | 48.83 | OK | |
| r-release-linux-x86_64 | 0.1.0 | 4.00 | 44.13 | 48.13 | OK | |
| r-release-macos-arm64 | 0.1.0 | 1.00 | 21.00 | 22.00 | ERROR | |
| r-release-macos-x86_64 | 0.1.0 | 4.00 | 165.00 | 169.00 | ERROR | |
| r-release-windows-x86_64 | 0.1.0 | 7.00 | 68.00 | 75.00 | ERROR | |
| r-oldrel-macos-arm64 | 0.1.0 | 1.00 | 28.00 | 29.00 | ERROR | |
| r-oldrel-macos-x86_64 | 0.1.0 | 4.00 | 123.00 | 127.00 | ERROR | |
| r-oldrel-windows-x86_64 | 0.1.0 | 9.00 | 80.00 | 89.00 | ERROR |
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘spelling.R’ [0s/0s]
Running ‘testthat.R’ [1s/3s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(ORscraper)
>
> test_check("ORscraper")
Saving _problems/test_extract_chip_id-10.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_extract_chip_id.R:10:3'): Testing the extract_chip_id function ──
Expected `result` to equal "100.1".
Differences:
`actual`: "4.6"
`expected`: "100.1"
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-macos-arm64
Version: 0.1.0
Check: tests
Result: ERROR
Running 'spelling.R' [0s]
Running 'testthat.R' [5s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(ORscraper)
>
> test_check("ORscraper")
Saving _problems/test_extract_chip_id-10.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_extract_chip_id.R:10:3'): Testing the extract_chip_id function ──
Expected `result` to equal "100.1".
Differences:
`actual`: "4.6"
`expected`: "100.1"
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-windows-x86_64
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘spelling.R’ [0s/0s]
Running ‘testthat.R’ [1s/3s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(ORscraper)
>
> test_check("ORscraper")
Saving _problems/test_extract_chip_id-10.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_extract_chip_id.R:10:3'): Testing the extract_chip_id function ──
Expected `result` to equal "100.1".
Differences:
`actual`: "4.5"
`expected`: "100.1"
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-arm64
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘spelling.R’ [0s/1s]
Running ‘testthat.R’ [2s/17s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(ORscraper)
>
> test_check("ORscraper")
Saving _problems/test_extract_chip_id-10.R
Saving _problems/test_search_ncbi_clinvar-31.R
[ FAIL 2 | WARN 0 | SKIP 0 | PASS 62 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_extract_chip_id.R:10:3'): Testing the extract_chip_id function ──
Expected `result` to equal "100.1".
Differences:
`actual`: "4.5"
`expected`: "100.1"
── Error ('test_search_ncbi_clinvar.R:31:3'): search_ncbi_clinvar correctly retrieves pathogenicity information ──
<curl_error_operation_timedout/curl_error/error/condition>
Error in `curl::curl_fetch_memory(url, handle = handle)`: Timeout was reached [eutils.ncbi.nlm.nih.gov]:
Connection timed out after 10003 milliseconds
Backtrace:
▆
1. ├─ORscraper::search_ncbi_clinvar(...) at test_search_ncbi_clinvar.R:31:3
2. │ └─rentrez::entrez_search(db = "clinvar", term = gene_query)
3. │ └─rentrez:::make_entrez_query(...)
4. │ └─httr::GET(uri, query = args, config = config)
5. │ └─httr:::request_perform(req, hu$handle$handle)
6. │ ├─httr:::request_fetch(req$output, req$url, handle)
7. │ └─httr:::request_fetch.write_memory(req$output, req$url, handle)
8. │ └─curl::curl_fetch_memory(url, handle = handle)
9. └─curl:::raise_libcurl_error(...)
[ FAIL 2 | WARN 0 | SKIP 0 | PASS 62 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 0.1.0
Check: tests
Result: ERROR
Running 'spelling.R' [0s]
Running 'testthat.R' [5s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(ORscraper)
>
> test_check("ORscraper")
Saving _problems/test_extract_chip_id-10.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_extract_chip_id.R:10:3'): Testing the extract_chip_id function ──
Expected `result` to equal "100.1".
Differences:
`actual`: "4.5"
`expected`: "100.1"
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-windows-x86_64
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘spelling.R’ [0s/0s]
Running ‘testthat.R’ [1s/6s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(ORscraper)
>
> test_check("ORscraper")
Saving _problems/test_extract_chip_id-10.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_extract_chip_id.R:10:3'): Testing the extract_chip_id function ──
Expected `result` to equal "100.1".
Differences:
`actual`: "4.4"
`expected`: "100.1"
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-arm64
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘spelling.R’ [0s/1s]
Running ‘testthat.R’ [2s/8s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(ORscraper)
>
> test_check("ORscraper")
Saving _problems/test_extract_chip_id-10.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_extract_chip_id.R:10:3'): Testing the extract_chip_id function ──
Expected `result` to equal "100.1".
Differences:
`actual`: "4.4"
`expected`: "100.1"
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64
Version: 0.1.0
Check: tests
Result: ERROR
Running 'spelling.R' [0s]
Running 'testthat.R' [6s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(ORscraper)
>
> test_check("ORscraper")
Saving _problems/test_extract_chip_id-10.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_extract_chip_id.R:10:3'): Testing the extract_chip_id function ──
Expected `result` to equal "100.1".
Differences:
`actual`: "4.4"
`expected`: "100.1"
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-windows-x86_64