# Application of NODEs in 'Monolix', 'NONMEM', and 'nlmixr2'

## Documentation for package ‘pmxNODE’ version 0.1.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

copy_examples | Copy examples to your folder
der_state_plot_mlx | Generate Derivative versus State Plot (Monolix)
der_state_plot_nlmixr | Generate Derivative versus State Plot (nlmixr2)
der_state_plot_nm | Generate Derivative versus State Plot (NONMEM)
find_nmfe | Finde path to NONMEM nmfe file
get_example_list | List of examples available
indparm_extractor_mlx | Monolix individual estimations extractor
indparm_extractor_nlmixr | nlmixr individual estimations extractor
indparm_extractor_nm | NONMEM individual estimations extractor
ind_der_state_plot_mlx | Generate Derivative versus State Plot for individual parameter estimates (Monolix)
ind_der_state_plot_nlmixr | Generate Derivative versus State Plot for individual parameter estimates (nlmixr2)
ind_der_state_plot_nm | Generate Derivative versus State Plot for individual parameter estimates (NONMEM)
ind_rhs_plot_mlx | Generate individual Right-hand side data plot (Monolix)
ind_rhs_plot_nlmixr | Generate individual Right-hand side data plot (nlmixr2)
ind_rhs_plot_nm | Generate individual Right-hand side data plot (NONMEM)
NN | Neural Network ODE language in nlmixr2 langauage
NNbsv | Change a population Neural Network model to a model with between subject variability
nn_converter_mlx | NN converter for Monolix
nn_converter_nlmixr | NN converter for nlmixr
nn_converter_nm | NN converter for NONMEM
pre_fixef_extractor_mlx | Monolix estimations extractor
pre_fixef_extractor_nm | THETA extraction from results file
rhs_plot_mlx | Generate Right-hand side data plot (Monolix)
rhs_plot_nlmixr | Generate Right-hand side data plot (nlmixr2)
rhs_plot_nm | Generate Right-hand side data plot (NONMEM)
run_mlx | Run Monolix from R
run_nm | Run NONMEM from R
software_initializer | Initialize software (Suspended)