# Generated by roxygen2: do not edit by hand

S3method(adjacency,neighbor_graph)
S3method(adjacency,nn_search)
S3method(between_class_neighbors,class_graph)
S3method(class_means,class_graph)
S3method(dist_to_sim,Matrix)
S3method(dist_to_sim,nn_search)
S3method(edges,neighbor_graph)
S3method(find_nn,nnsearcher)
S3method(find_nn_among,class_graph)
S3method(find_nn_among,nnsearcher)
S3method(find_nn_between,nnsearcher)
S3method(laplacian,neighbor_graph)
S3method(nclasses,class_graph)
S3method(neighbor_graph,Matrix)
S3method(neighbor_graph,igraph)
S3method(neighbor_graph,matrix)
S3method(neighbor_graph,nnsearcher)
S3method(neighbors,neighbor_graph)
S3method(node_density,neighbor_graph)
S3method(non_neighbors,neighbor_graph)
S3method(nvertices,neighbor_graph)
S3method(print,repulsion_graph)
S3method(search_result,nnsearcher)
S3method(within_class_neighbors,class_graph)
export(adjacency)
export(between_class_neighbors)
export(bilateral_smoother)
export(binary_label_matrix)
export(class_graph)
export(class_means)
export(commute_time_distance)
export(compute_diffusion_kernel)
export(compute_diffusion_map)
export(convolve_matrix)
export(cross_adjacency)
export(cross_spatial_adjacency)
export(cross_weighted_spatial_adjacency)
export(design_kernel)
export(diagonal_label_matrix)
export(diagonal_label_matrix_na)
export(difference_of_gauss)
export(discriminating_distance)
export(discriminating_similarity)
export(dist_to_sim)
export(edges)
export(estimate_sigma)
export(example_kernel_5x5)
export(expand_label_similarity)
export(factor_sim)
export(feature_weighted_spatial_constraints)
export(find_nn)
export(find_nn_among)
export(find_nn_between)
export(graph_weights)
export(graph_weights_fast)
export(heat_kernel)
export(helmert_contrasts)
export(heterogeneous_neighbors)
export(homogeneous_neighbors)
export(inverse_heat_kernel)
export(kernel_alignment)
export(kernel_roots)
export(laplacian)
export(local_global_adjacency)
export(make_doubly_stochastic)
export(nclasses)
export(neighbor_graph)
export(neighbors)
export(nnsearcher)
export(node_density)
export(non_neighbors)
export(normalize_adjacency)
export(normalized_heat_kernel)
export(nvertices)
export(pairwise_adjacency)
export(psparse)
export(repulsion_graph)
export(search_result)
export(spatial_adjacency)
export(spatial_autocor)
export(spatial_constraints)
export(spatial_lap_of_gauss)
export(spatial_laplacian)
export(spatial_smoother)
export(sum_contrasts)
export(temporal_adjacency)
export(temporal_autocor)
export(temporal_laplacian)
export(threshold_adjacency)
export(weighted_factor_sim)
export(weighted_knn)
export(weighted_spatial_adjacency)
export(within_class_neighbors)
importFrom(Matrix,Diagonal)
importFrom(Matrix,Matrix)
importFrom(Matrix,bandSparse)
importFrom(Matrix,crossprod)
importFrom(Matrix,diag)
importFrom(Matrix,drop0)
importFrom(Matrix,kronecker)
importFrom(Matrix,rowSums)
importFrom(Matrix,sparseMatrix)
importFrom(Matrix,t)
importFrom(Matrix,tcrossprod)
importFrom(Matrix,which)
importFrom(RSpectra,eigs)
importFrom(Rcpp,evalCpp)
importFrom(Rnanoflann,nn)
importFrom(assertthat,assert_that)
importFrom(chk,chk_matrix)
importFrom(chk,chk_numeric)
importFrom(corpcor,invcor.shrink)
importFrom(igraph,as_adjacency_matrix)
importFrom(igraph,graph_from_adjacency_matrix)
importFrom(methods,as)
importFrom(mgcv,gam)
importFrom(parallel,mclapply)
importFrom(proxy,simil)
importFrom(stats,contr.helmert)
importFrom(stats,contr.sum)
importFrom(stats,cor)
importFrom(stats,dist)
importFrom(stats,model.matrix)
importFrom(stats,predict)
importFrom(stats,setNames)
importFrom(utils,combn)
importFrom(utils,head)
useDynLib(adjoin, .registration=TRUE)
