81bf5ee4f7cf831e34c64036c8b399f7 *DESCRIPTION
222c4c14a6235778064261d5a69ed03e *LICENSE
1c5a522427a87bdf1d9c966cb6c7e17d *NAMESPACE
084be9dce3c3c712abf1cecffb41413d *NEWS.md
32130da3e2dfdbdd5b8e814e2ae9347d *R/callRelatedness.R
192c669730af5c34c0e12cf847d60db1 *R/counts_example.R
a3a5064136d4c864d17372563699212d *R/get_column.R
3417a0eada263a25cd09719ee4c8bd2a *R/plotDOUGH.R
d9e207e47fa5fe6970c47f2ea03a1c98 *R/plotLOAF.R
83b9f9965c96ebfb87fde48b0735402b *R/plotSLICE.R
857764085e6ace7f3173521caa5f690a *R/priorSensitivity.R
c3e805d76037b7df414db0852bbe32c0 *R/processEigenstrat.R
ec3dbbe5e3dab74974005c0258fa1d5c *R/processEigenstrat_old.R
5f9b313cca6c2a81574a32b1ff12dc0f *R/read_ind.R
5a71cab5f2f6f2abcebf8c78f34909a0 *R/read_snp.R
9218d6dd48226e0f7ff2a03b106f4053 *R/relatedness_example.R
c73a5900eb928a666d27ee24ad38311c *R/saveSLICES.R
ca6be43d6df5215d1e087be6a35dbf10 *R/sim_geno.R
768356685dacfa6816953c00820adc2a *R/test_degree.R
b56ff2b193ecba52f9ec7f3b10cca008 *R/utils-pipe.R
c5809481aa2cbce0ac7f5f9975d98d59 *R/utils.R
83ca38ce1a08a22a6f02ef8b38e78fe2 *README.md
253fd7ee816c10370324738d0625ed25 *build/vignette.rds
159dd784921dd40fc8f284951ba83ec1 *data/counts_example.rda
4afa7fc6849867528945169b4a2573e7 *data/relatedness_example.rda
e4f707ff07bda1d9747b6fb1ef080094 *inst/CITATION
f03ee7061c1a10c05562ee8e6ef25b56 *inst/WORDLIST
235614b87910dab35f8399831263a715 *inst/doc/example-pipeline.R
4ebb2300d7d4367a90ef6b8406a9f7f9 *inst/doc/example-pipeline.Rmd
d8510de31a8efdd30785e32e03444398 *inst/doc/example-pipeline.html
3f1d915c22a0ad46347e908c274f2894 *inst/extdata/broken.snp.txt
42852b57c8ef5b117409395830ffaf9e *inst/extdata/example.geno.txt
d51c5d20e8959a1b4e1a64e639375f93 *inst/extdata/example.ind.txt
52e942d3ba3fe8ec639b1ce7f7e510e3 *inst/extdata/example.snp.txt
5c1c18824671c766a591984eb0691a89 *inst/extdata/example2.ind.txt
ba446d48ec483bf9ed4a767dd92262c2 *inst/manuscript/BREAD_20230220.pdf
162bd89a5dcf67ab5c4a1cd9c795cddd *man/callRelatedness.Rd
348a2150128871fa0d0612f58d32e638 *man/counts_example.Rd
32cb276b6dcaf4f2afe9e06868a42cfa *man/figures/README-pressure-1.png
9885dda8859a57f77cdba96300990969 *man/figures/README-unnamed-chunk-10-1.png
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8445344685c261c0c9b8fdcecc812826 *man/figures/README-unnamed-chunk-7-1.png
0077c7ff5b1498f239eff9e1991135eb *man/figures/README-unnamed-chunk-8-1.png
9885dda8859a57f77cdba96300990969 *man/figures/README-unnamed-chunk-9-1.png
a6fbb562e6436919d49992e5de1bce72 *man/get_column_new.Rd
8f4aad003a999fae004ba9361f9a99d6 *man/pipe.Rd
5e9f579973560a38c73d79f35076fa08 *man/plotDOUGH.Rd
37b4f38ea35850f1e6a90fc43592f848 *man/plotLOAF.Rd
3e1d88fbcc24202919f666f6e5fda8a2 *man/plotSLICE.Rd
bba71ef99d655655c83ce0dcf1e6a720 *man/priorSensitivity.Rd
aa41f6e88e749828e9dfc953323a5fd9 *man/processEigenstrat.Rd
908095f475ac19c6844a6073168f2f95 *man/processEigenstrat_old.Rd
b367635e50606f93ae4882b30dcc3045 *man/read_ind.Rd
0332ea1294b0cfa276cf5ecf3201af8f *man/read_snp.Rd
31b97ea4f84cc36faf5d5b84ae4c2647 *man/relatedness_example.Rd
55e9714d748dd27a2cf34e232fd85555 *man/saveSLICES.Rd
98a157ee86f625e458fad0716cbc3092 *man/sim_geno.Rd
fa21df7d5a1048bf25347d2c9c6aa6a1 *man/split_line.Rd
7af314fdda581232156145ff72a506ec *man/test_degree.Rd
0622a97a2aaa3c342f09636052c2d7f5 *tests/spelling.R
34ffb7ac961777363fd9222f0ce51bce *tests/testthat.R
ef5097753b3ebd880ca2cc215ace536c *tests/testthat/test-callRelatedness.R
4f15a19965d6999f7fb1aed203eca3af *tests/testthat/test-plotLOAF.R
5e043afd678690891439b98e841aec60 *tests/testthat/test-plotSLICE.R
d7a70fb39794fea804c6296f36c1040c *tests/testthat/test-processEigenstrat.R
c36cf2539f5979cf46e0b38208cb5434 *tests/testthat/test-read_snp.R
d2d31318bf2d836f40d8a6912782a85f *tests/testthat/test-saveSLICES.R
9bd159f3700ac0b685fe7e0de1bcab44 *tests/testthat/test-test_degree.R
4ebb2300d7d4367a90ef6b8406a9f7f9 *vignettes/example-pipeline.Rmd
