submitr: Scaffold and Submit Computational Jobs to HTC Schedulers
Provides scaffolding tools to help researchers prepare and submit
computational jobs to high-throughput computing (HTC) schedulers. Generates
the files required to run containerized R analyses on 'HTCondor', including
submit files and executable scripts, and wraps the system commands needed to
stage files, submit jobs, monitor status, and retrieve results from a CHTC
submit node. Provides 'htc_config()' for managing connection details and
SSH connection reuse guidance. Works naturally alongside 'containr' for
container image management and 'toolero' for dataset splitting and project
scaffolding.
| Version: |
0.1.0 |
| Imports: |
cli, glue, readr, yaml |
| Suggests: |
containr, knitr, rmarkdown, spelling, testthat (≥ 3.0.0), toolero, withr |
| Published: |
2026-05-19 |
| DOI: |
10.32614/CRAN.package.submitr (may not be active yet) |
| Author: |
Erwin Lares  [aut,
cre] |
| Maintainer: |
Erwin Lares <erwin.lares at wisc.edu> |
| BugReports: |
https://github.com/erwinlares/submitr/issues |
| License: |
MIT + file LICENSE |
| URL: |
https://erwinlares.github.io/submitr/ |
| NeedsCompilation: |
no |
| SystemRequirements: |
SSH client, HTCondor (https://htcondor.org) |
| Language: |
en-US |
| Materials: |
README, NEWS |
| CRAN checks: |
submitr results |
Documentation:
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