Bundles the 'duckhts' 'DuckDB' extension for reading High Throughput Sequencing file formats with 'DuckDB'. The 'DuckDB' C extension API <https://duckdb.org/docs/stable/clients/c/api> and its 'htslib' dependency are compiled from vendored sources during package installation. James K Bonfield and co-authors (2021) <doi:10.1093/gigascience/giab007>.
| Version: | 0.1.3-0.0.2 |
| Depends: | R (≥ 4.4.0) |
| Imports: | DBI, duckdb, utils |
| Suggests: | tinytest |
| Published: | 2026-02-24 |
| DOI: | 10.32614/CRAN.package.Rduckhts |
| Author: | Sounkou Mahamane Toure [aut, cre], James K Bonfield, John Marshall,Petr Danecek ,Heng Li , Valeriu Ohan, Andrew Whitwham,Thomas Keane , Robert M Davies [ctb] (Htslib Authors), DuckDB C Extension API Authors [ctb] |
| Maintainer: | Sounkou Mahamane Toure <sounkoutoure at gmail.com> |
| BugReports: | https://github.com/RGenomicsETL/duckhts/issues |
| License: | GPL-3 |
| Copyright: | See inst/COPYRIGHT |
| URL: | https://github.com/RGenomicsETL/duckhts |
| NeedsCompilation: | no |
| SystemRequirements: | GNU make, cmake, zlib, libbz2, liblzma, libcurl, openssl (development headers) |
| Materials: | NEWS |
| CRAN checks: | Rduckhts results |
| Reference manual: | Rduckhts.html , Rduckhts.pdf |
| Package source: | Rduckhts_0.1.3-0.0.2.tar.gz |
| Windows binaries: | r-devel: Rduckhts_0.1.2-0.1.4.zip, r-release: not available, r-oldrel: Rduckhts_0.1.2-0.1.4.zip |
| macOS binaries: | r-release (arm64): not available, r-oldrel (arm64): not available, r-release (x86_64): not available, r-oldrel (x86_64): not available |
| Old sources: | Rduckhts archive |
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