Last updated on 2025-12-13 10:50:40 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.44 | 244.99 | 257.43 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.16 | 254.00 | 264.16 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 23.00 | 317.11 | 340.11 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 29.00 | 402.64 | 431.64 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.20 | 300.73 | 315.93 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.16 | 251.46 | 265.62 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 179.00 | 189.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 187.00 | 208.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 198.00 | 208.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 232.00 | 257.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/128s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.764, system: 0.079, elapsed: 2.598 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.812, system: 0.245, elapsed: 15.668 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.017, elapsed: 0.521 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.129, system: 0.267, elapsed: 8.263 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.009, elapsed: 0.335 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.657, system: 0.648, elapsed: 28.405 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.753, system: 0.074, elapsed: 2.854 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.800, system: 0.272, elapsed: 15.217 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.017, elapsed: 0.283 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.922, system: 0.182, elapsed: 4.884 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.006, elapsed: 0.202 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.409, system: 0.588, elapsed: 24.322 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.524, system: 0.033, elapsed: 1.646 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.748, system: 0.354, elapsed: 13.317 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.020, elapsed: 0.363 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.318, system: 0.358, elapsed: 7.007 seconds]
Computing values for grid cells...
... done. [user: 0.194, system: 0.020, elapsed: 0.241 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.261, system: 0.290, elapsed: 1.152 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.899, system: 1.123, elapsed: 24.684 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.838, system: 0.114, elapsed: 2.776 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.512, system: 0.117, elapsed: 14.928 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.011, elapsed: 0.304 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.972, system: 0.190, elapsed: 6.293 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.003, elapsed: 0.253 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.745, system: 0.466, elapsed: 17.029 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.090, system: 0.932, elapsed: 42.649 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/146s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.765, system: 0.075, elapsed: 3.415 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.720, system: 0.217, elapsed: 15.913 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.210, system: 0.020, elapsed: 0.418 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.042, system: 0.271, elapsed: 7.540 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.011, elapsed: 0.324 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.493, system: 0.627, elapsed: 28.673 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.738, system: 0.061, elapsed: 2.816 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.642, system: 0.174, elapsed: 14.903 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.206, system: 0.022, elapsed: 0.394 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.223, system: 0.366, elapsed: 8.921 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.012, elapsed: 0.360 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.544, system: 0.679, elapsed: 28.406 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.890, system: 0.107, elapsed: 3.055 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.554, system: 0.148, elapsed: 17.680 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.013, elapsed: 0.367 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.809, system: 0.176, elapsed: 6.945 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.005, elapsed: 0.280 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.116, system: 0.260, elapsed: 1.269 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.389, system: 0.746, elapsed: 30.810 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.591, system: 0.032, elapsed: 2.840 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.596, system: 0.093, elapsed: 18.123 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.011, elapsed: 0.373 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.751, system: 0.177, elapsed: 5.958 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.004, elapsed: 0.313 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.742, system: 0.484, elapsed: 20.083 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.709, system: 0.826, elapsed: 48.876 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64