# Tools for Cluster Analysis

## Documentation for package ‘T4cluster’ version 0.1.4

- DESCRIPTION file
- Package NEWS
- Package README

## Help Pages

ccphate | Consensus Clustering with PHATE Geometry
compare.adjrand | (+) Adjusted Rand Index
compare.rand | (+) Rand Index
dpmeans | DP-Means Clustering
EKSS | Ensembles of K-Subspaces
ephclust | Hierarchical Agglomerative Clustering for Empirical Distributions
funhclust | Functional Hierarchical Clustering
funkmeans03A | Functional K-Means Clustering by Abraham et al. (2003)
gbphate | Generalized Bayesian Clustering with PHATE Geometry
gen3S | Generate from Three 5-dimensional Subspaces in 200-dimensional space.
genDONUTS | Generate Nested Donuts
genLP | Generate Line and Plane Example with Fixed Number of Components
genSMILEY | Generate SMILEY Data
gmm | Finite Gaussian Mixture Model
gmm03F | Ensemble of Gaussian Mixtures with Random Projection
gmm11R | Regularized GMM by Ruan et al. (2011)
gmm16G | Weighted GMM by Gebru et al. (2016)
gskmeans | Geodesic Spherical K-Means
household | Load 'household' data
kmeans | K-Means Clustering
kmeans18B | K-Means Clustering with Lightweight Coreset
kmeanspp | K-Means++ Clustering
LRR | Low-Rank Representation
LRSC | Low-Rank Subspace Clustering
LSR | Least Squares Regression
MSM | Bayesian Mixture of Subspaces of Different Dimensions
pcm | Compute Pairwise Co-occurrence Matrix
predict.MSM | S3 method to predict class label of new data with 'MSM' object
psm | Compute Posterior Similarity Matrix
quality.CH | (+) CH index
quality.sil | (+) Silhouette Index
sc05Z | Spectral Clustering by Zelnik-Manor and Perona (2005)
sc09G | Spectral Clustering by Gu and Wang (2009)
sc10Z | Spectral Clustering by Zhang et al. (2010)
sc11Y | Spectral Clustering by Yang et al. (2011)
sc12L | Spectral Clustering by Li and Guo (2012)
scNJW | Spectral Clustering by Ng, Jordan, and Weiss (2002)
scSM | Spectral Clustering by Shi and Malik (2000)
scUL | Spectral Clustering with Unnormalized Laplacian
spkmeans | Spherical K-Means Clustering
SSC | Sparse Subspace Clustering
SSQP | Subspace Segmentation via Quadratic Programming