piglet-package	piglet-package
%>%	pipe
.create_iuis_labels_with_markers	dot-create_iuis_labels_with_markers
.getNClusters	dot-getNClusters
alleleClusterNames	alleleClusterNames
allele_cluster_table	allele_cluster_table
allele_diff	allele_diff
allele_diff_indices	allele_diff_indices
allele_diff_indices_parallel	allele_diff_indices_parallel
allele_diff_indices_parallel2	allele_diff_indices_parallel2
allele_diff_strings	allele_diff_strings
allele_threshold_table	allele_threshold_table
artificialFRW1Germline	artificialFRW1Germline
assignAlleleClusters	assignAlleleClusters
compute_distance	compute_distance
detect_communities_leiden	detect_communities_leiden
distance_to_graph	distance_to_graph
extractASCTable	extractASCTable
generateReferenceSet	generateReferenceSet
germlineASC	germlineASC
GermlineCluster	GermlineCluster
HVGERM	HVGERM
hv_functionality	hv_functionality
igClust	igClust
igDistance	igDistance
ighvClust	ighvClust
ighvDistance	ighvDistance
inferAlleleClusters	inferAlleleClusters
inferGenotypeAllele	inferGenotypeAllele
inferGenotypeAllele_asc	inferGenotypeAllele_asc
insert_gaps2_vec	insert_gaps2_vec
new_germline_cluster	new_germline_cluster
optimize_resolution	optimize_resolution
piglet	piglet
plot.GermlineCluster	plot.GermlineCluster
plotAlleleCluster	plotAlleleCluster
plotClusterComparison	plotClusterComparison
plotCommunityNetwork	plotCommunityNetwork
plotSilhouetteOptimization	plotSilhouetteOptimization
plotTruncatedTree	plotTruncatedTree
print.GermlineCluster	print.GermlineCluster
recentAlleleClusters	recentAlleleClusters
summary.GermlineCluster	summary.GermlineCluster
zenodoArchive	zenodoArchive
