Package: SoupX
Title: Single Cell mRNA Soup eXterminator
Version: 1.6.2
Date: 2022-11-01
Author: Matthew Daniel Young
Maintainer: Matthew Daniel Young <my4@sanger.ac.uk>
Description: Quantify, profile and remove ambient mRNA contamination (the "soup") from droplet based single cell RNA-seq experiments.  Implements the method described in Young et al. (2018) <doi:10.1101/303727>.
URL: https://github.com/constantAmateur/SoupX
Suggests: knitr, rstan, DropletUtils, rmarkdown, formatR
VignetteBuilder: knitr
Imports: ggplot2, Matrix, methods, Seurat (>= 3.2.2)
Depends: R (>= 3.5.0)
LazyData: true
LazyDataCompression: xz
License: GPL-2
Encoding: UTF-8
RoxygenNote: 7.1.1
NeedsCompilation: no
Packaged: 2022-11-01 13:18:04 UTC; my4
Repository: CRAN
Date/Publication: 2022-11-01 14:00:03 UTC
Built: R 4.4.3; ; 2025-12-08 05:02:28 UTC; windows
