Bioconductor Single Package Builder - Build History

Snapshot Date: 
URL:  https://git.bioconductor.org/packages/ontoProc2
Last Changed Rev:  / Revision: 
Last Changed Date: 

Hostname OS /Arch BUILD CHECK BUILD BIN POST-PROCESSING
nebbiolo1 Linux (Ubuntu 24.04.3 LTS)/x86_64   ERROR     skipped     skipped     skipped  

nebbiolo1 Summary

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Package: ontoProc2
Version: 0.99.11
RVersion: 4.6
BiocVersion: 3.23
BuildCommand: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data ontoProc2
BuildTime: 1 minutes 19.67 seconds
CheckCommand:
CheckTime:
BuildBinCommand:
BuildBinTime:
PackageFileSize: -1.00 KiB
BuildID:: ontoProc2_20260331200245
PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: ontoProc2. Starting Build package.
PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 0. Build Package status: 1.

nebbiolo1 BUILD SRC output

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===============================

 R CMD BUILD

===============================

* checking for file ontoProc2/DESCRIPTION ... OK
* preparing ontoProc2:
* checking DESCRIPTION meta-information ... OK
* installing the package (it is needed to build vignettes)
* creating vignettes ... ERROR
--- re-building celltoprotein.Rmd using rmarkdown

Quitting from celltoprotein.Rmd:86-93 [domo]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `datatable()`:
! could not find function "datatable"
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'celltoprotein.Rmd' failed with diagnostics:
could not find function "datatable"
--- failed re-building celltoprotein.Rmd

--- re-building ontoProc2.Rmd using rmarkdown
--- finished re-building ontoProc2.Rmd

--- re-building uberonpeek.Rmd using rmarkdown
Warning: call dbDisconnect() when finished working with a connection
--- finished re-building uberonpeek.Rmd

SUMMARY: processing the following file failed:
  celltoprotein.Rmd

Error: Vignette re-building failed.
Execution halted

nebbiolo1 CHECK output

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nebbiolo1 BUILD BIN output
 
                    			
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