# Enhancing Cross-Language Mass Spectrometry Data Analysis with R and Python

## Documentation for package ‘SpectriPy’ version 1.2.0

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS

## Help Pages

$-method | A MS data backend for MS data stored in Python
$<--method | A MS data backend for MS data stored in Python
backendInitialize-method | A MS data backend for MS data stored in Python
compareSpectriPy | Spectra similarity calculations using Python's matchms library
compareSpectriPy-method | Spectra similarity calculations using Python's matchms library
conversion | Converting between R and Python MS data structures
CosineGreedy | Spectra similarity calculations using Python's matchms library
CosineHungarian | Spectra similarity calculations using Python's matchms library
defaultSpectraVariableMapping | Converting between R and Python MS data structures
filterSpectriPy | Filter Spectra using Python's matchms library
filterSpectriPy-method | Filter Spectra using Python's matchms library
intensity<--method | A MS data backend for MS data stored in Python
length-method | A MS data backend for MS data stored in Python
ModifiedCosine | Spectra similarity calculations using Python's matchms library
ModifiedCosineGreedy | Spectra similarity calculations using Python's matchms library
ModifiedCosineHungarian | Spectra similarity calculations using Python's matchms library
MsBackendPy | A MS data backend for MS data stored in Python
mz<--method | A MS data backend for MS data stored in Python
NeutralLossesCosine | Spectra similarity calculations using Python's matchms library
normalize_intensities | Filter Spectra using Python's matchms library
peaksData-method | A MS data backend for MS data stored in Python
peaksData<--method | A MS data backend for MS data stored in Python
pyspec_copy_on_replace | Copy Python MS data structure on MS data replacement operations
pyspec_to_rspec | Converting between R and Python MS data structures
reindex | A MS data backend for MS data stored in Python
remove_peaks_around_precursor_mz | Filter Spectra using Python's matchms library
rspec_to_pyspec | Converting between R and Python MS data structures
r_to_py.Spectra | Converting between R and Python MS data structures
select_by_intensity | Filter Spectra using Python's matchms library
select_by_mz | Filter Spectra using Python's matchms library
setBackend-method | A MS data backend for MS data stored in Python
setSpectraVariableMapping | Converting between R and Python MS data structures
spectraData-method | A MS data backend for MS data stored in Python
spectraData<--method | A MS data backend for MS data stored in Python
spectraNames<--method | A MS data backend for MS data stored in Python
spectraVariableMapping-method | A MS data backend for MS data stored in Python
spectraVariableMapping-method | Converting between R and Python MS data structures
spectraVariableMapping<--method | A MS data backend for MS data stored in Python
spectraVariables-method | A MS data backend for MS data stored in Python