Consensus               Consensus Clustering
FEAST                   FEAST main function
FEAST_fast              FEAST main function (fast version)
Norm_Y                  Normalize the count expression matrix by the
                        size factor and take the log transformation.
Purity                  Calculate the purity between two vectors.
SC3_Clust               SC3 Clustering
Select_Model_short_SC3
                        Using clustering results based on feature
                        selection to perform model selection.
Select_Model_short_TSCAN
                        Using clustering results (from TSCAN) based on
                        feature selection to perform model selection.
TSCAN_Clust             TSCAN Clustering
Visual_Rslt             Using clustering results based on feature
                        selection to perform model selection.
Y                       An example single cell count expression matrix
                        (Yan)
align_CellType          Align the cell types from the prediction with
                        the truth.
cal_F2                  Calculate the gene-level F score and
                        corresponding significance level.
cal_Fisher2             Calculate the gene-level fisher score.
cal_MSE                 Standard way to preprocess the count matrix. It
                        is the QC step for the genes.
cal_metrics             Calculate 3 metrics and these methods are
                        exported in C codes. flag = 1 - Rand index,
                        flag = 2 - Fowlkes and Mallows's index, flag =
                        3 - Jaccard index
eval_Cluster            Calculate the a series of the evaluation
                        statistics.
process_Y               Standard way to preprocess the count matrix. It
                        is the QC step for the genes.
trueclass               An example single cell dataset for the cell
                        label information (Yan)
vector2matrix           function for convert a vector to a binary
                        matrix
