Package: evaluomeR
Type: Package
Title: Evaluation of Bioinformatics Metrics
URL: https://github.com/neobernad/evaluomeR
Version: 1.27.0
Authors@R: c(
    person("José Antonio", "Bernabé-Díaz", email = "joseantonio.bernabe1@um.es", role = c("aut", "cre")),
    person("Manuel", "Franco", email = "mfranco@um.es", role = "aut"),
    person("Juana-María", "Vivo", email = "jmvivomo@um.es", role = "aut"),
    person("Manuel", "Quesada-Martínez", email = "mquesada@umh.es", role = "aut"),
    person("Astrid", "Duque-Ramos", email = "asdur02@gmail.com", role = "aut"),
    person("Jesualdo Tomás", "Fernández-Breis", email = "jfernand@um.es", role = "aut")
    )
BugReports: https://github.com/neobernad/evaluomeR/issues
Description: Evaluating the reliability of your own metrics and the
        measurements done on your own datasets by analysing the
        stability and goodness of the classifications of such metrics.
License: GPL-3
Encoding: UTF-8
LazyData: true
Depends: R (>= 3.6), SummarizedExperiment, MultiAssayExperiment,
        cluster (>= 2.0.9), fpc (>= 2.2-3), randomForest (>= 4.6.14),
        flexmix (>= 2.3.15), RSKC (>= 2.4.2), sparcl (>= 1.0.4)
Imports: corrplot (>= 0.84), grDevices, graphics, reshape2, ggplot2,
        ggdendro, plotrix, stats, matrixStats, Rdpack, MASS, class,
        prabclus, mclust, kableExtra, dplyr, dendextend (>= 1.16.0)
Suggests: BiocStyle, knitr, rmarkdown, magrittr
VignetteBuilder: knitr
RdMacros: Rdpack
RoxygenNote: 7.0.2
biocViews: Clustering, Classification, FeatureExtraction
Collate: 'data.R' 'helpers.R' 'internalClusterboot.R'
        'internalFunctions.R' 'stabilityIndex.R' 'qualityIndices.R'
        'correlation.R' 'metricsAnalysis.R' 'predictions.R'
Config/pak/sysreqs: libfontconfig1-dev libfreetype6-dev libfribidi-dev
        make libharfbuzz-dev libicu-dev libpng-dev libxml2-dev
        zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 14:50:57 UTC
RemoteUrl: https://github.com/bioc/evaluomeR
RemoteRef: HEAD
RemoteSha: 71a13fd756620f252ffcae1d27b511562b40054d
NeedsCompilation: no
Packaged: 2025-11-02 14:50:39 UTC; root
Author: José Antonio Bernabé-Díaz [aut, cre],
  Manuel Franco [aut],
  Juana-María Vivo [aut],
  Manuel Quesada-Martínez [aut],
  Astrid Duque-Ramos [aut],
  Jesualdo Tomás Fernández-Breis [aut]
Maintainer: José Antonio Bernabé-Díaz <joseantonio.bernabe1@um.es>
Built: R 4.6.0; ; 2025-11-02 14:53:00 UTC; windows
