LVSmiRNA
This package is for version 3.9 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see LVSmiRNA.
LVS normalization for Agilent miRNA data
Bioconductor version: 3.9
Normalization of Agilent miRNA arrays.
Author: Stefano Calza, Suo Chen, Yudi Pawitan
Maintainer: Stefano Calza <stefano.calza at unibs.it>
Citation (from within R, enter
citation("LVSmiRNA")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("LVSmiRNA")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("LVSmiRNA")| LVSmiRNA.pdf | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | AgilentChip, Microarray, OneChannel, Preprocessing, Software |
| Version | 1.34.0 |
| In Bioconductor since | BioC 2.7 (R-2.12) (13.5 years) |
| License | GPL-2 |
| Depends | R (>= 3.1.0), methods, splines |
| Imports | BiocGenerics, stats4, graphics, stats, utils, MASS, Biobase, quantreg, limma, affy, SparseM, vsn, zlibbioc |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | parallel, snow, Rmpi |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | LVSmiRNA_1.34.0.tar.gz |
| Windows Binary | LVSmiRNA_1.34.0.zip (32- & 64-bit) |
| Mac OS X 10.11 (El Capitan) | LVSmiRNA_1.34.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/LVSmiRNA |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/LVSmiRNA |
| Bioc Package Browser | https://code.bioconductor.org/browse/LVSmiRNA/ |
| Package Short Url | https://bioconductor.org/packages/LVSmiRNA/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |