To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("msdata")
In most cases, you don't need to download the package archive at all.
msdata
|
This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see msdata.
Various Mass Spectrometry raw data example files
Bioconductor version: 3.4
Ion Trap positive ionization mode data in mzData file format. Subset from 500-850 m/z and 1190-1310 seconds, incl. MS2 and MS3, intensity threshold 100.000. Extracts from FTICR Apex III, m/z 400-450. Subset of UPLC - Bruker micrOTOFq data, both mzData, mzML and mz5. LC-MSMS files from proteomics experiments. PSI mzIdentML example files for various search engines.
Author: Steffen Neumann <sneumann at ipb-halle.de>, Laurent Gatto <lg390 at cam.ac.uk>
Maintainer: Steffen Neumann <sneumann at ipb-halle.de>, Laurent Gatto <lg390 at cam.ac.uk>
Citation (from within R,
enter citation("msdata")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("msdata")
Documentation
| Reference Manual |
Details
| biocViews | ExperimentData, MassSpectrometryData |
| Version | 0.14.0 |
| License | GPL (>= 2) |
| Depends | |
| Imports | |
| LinkingTo | |
| Suggests | xcms, mzR |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | IPO, MSnbase, mzR, RforProteomics, xcms |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | msdata_0.14.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.9 (Mavericks) | |
| Subversion source | (username/password: readonly) |
| Package Short Url | http://bioconductor.org/packages/msdata/ |
| Package Downloads Report | Download Stats |
Documentation »
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