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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("maSigPro")
In most cases, you don't need to download the package archive at all.
maSigPro
|
This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see maSigPro.
Significant Gene Expression Profile Differences in Time Course Gene Expression Data
Bioconductor version: 3.4
maSigPro is a regression based approach to find genes for which there are significant gene expression profile differences between experimental groups in time course microarray and RNA-Seq experiments.
Author: Ana Conesa <aconesa at cipf.es>, Maria Jose Nueda <mj.nueda at ua.es>
Maintainer: Maria Jose Nueda <mj.nueda at ua.es>
Citation (from within R,
enter citation("maSigPro")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("maSigPro")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("maSigPro")
| maSigPro Vignette | ||
| maSigProUsersGuide.pdf | ||
| Reference Manual |
Details
| biocViews | Differential Expression, Microarray, RNA-Seq, Software, TimeCourse |
| Version | 1.46.0 |
| In Bioconductor since | BioC 1.7 (R-2.2) (11.5 years) |
| License | GPL (>= 2) |
| Depends | R (>= 2.3.1), stats, Biobase, MASS |
| Imports | Biobase, graphics, grDevices, venn, mclust, stats, utils, MASS |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | http://bioinfo.cipf.es/ |
| Depends On Me | |
| Imports Me | |
| Suggests Me | oneChannelGUI |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | maSigPro_1.46.0.tar.gz |
| Windows Binary | maSigPro_1.46.0.zip |
| Mac OS X 10.9 (Mavericks) | maSigPro_1.46.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/maSigPro/tree/release-3.4 |
| Package Short Url | http://bioconductor.org/packages/maSigPro/ |
| Package Downloads Report | Download Stats |
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