To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("isomiRs")

In most cases, you don't need to download the package archive at all.

isomiRs

This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see isomiRs.

Analyze isomiRs and miRNAs from small RNA-seq

Bioconductor version: 3.4

Characterization of miRNAs and isomiRs, clustering and differential expression.

Author: Lorena Pantano, Georgia Escaramis

Maintainer: Lorena Pantano <lorena.pantano at gmail.com>

Citation (from within R, enter citation("isomiRs")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("isomiRs")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("isomiRs")

biocViews	Clustering, DifferentialExpression, RNASeq, Software, miRNA
Version	1.2.0
In Bioconductor since	BioC 3.3 (R-3.3) (1 year)
License	MIT + file LICENSE
Depends	R (>= 3.2), DiscriMiner, IRanges, S4Vectors(>= 0.9.25), GenomicRanges, SummarizedExperiment(>= 1.1.6)
Imports	BiocGenerics(>= 0.7.5), DESeq2, reshape, tidyr, plyr, readr, dplyr, RColorBrewer, gplots, methods, ggplot2, gtools, gridExtra, grid, GGally
LinkingTo
Suggests	knitr, RUnit, org.Mm.eg.db, cluster, clusterProfiler, BiocStyle
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	isomiRs_1.2.0.tar.gz
Windows Binary	isomiRs_1.2.0.zip
Mac OS X 10.9 (Mavericks)	isomiRs_1.2.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/isomiRs/tree/release-3.4
Package Short Url	http://bioconductor.org/packages/isomiRs/
Package Downloads Report	Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Please read the posting guide. Post questions about Bioconductor to one of the following locations: